RNA–Protein interactions for RNA: ENST00000316626.5

GSK3B-202, Transcript of glycogen synthase kinase 3 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GSK3B, Length 1,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-202ENST00000316626 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
GSK3B-202ENST00000316626 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
GSK3B-202ENST00000316626 ABCC9O60706 1549 aa20.41■□□□□ 0.86
GSK3B-202ENST00000316626 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
GSK3B-202ENST00000316626 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
GSK3B-202ENST00000316626 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
GSK3B-202ENST00000316626 NACADO15069 1562 aa19.82■□□□□ 0.76
GSK3B-202ENST00000316626 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
GSK3B-202ENST00000316626 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.75
GSK3B-202ENST00000316626 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
GSK3B-202ENST00000316626 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
GSK3B-202ENST00000316626 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
GSK3B-202ENST00000316626 PABPN1Q86U42 306 aaKnown RBP eCLIP19.18■□□□□ 0.66
GSK3B-202ENST00000316626 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.66
GSK3B-202ENST00000316626 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
GSK3B-202ENST00000316626 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
GSK3B-202ENST00000316626 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
GSK3B-202ENST00000316626 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
GSK3B-202ENST00000316626 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
GSK3B-202ENST00000316626 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
GSK3B-202ENST00000316626 SUPT5HO00267 1087 aaKnown RBP18.56■□□□□ 0.56
GSK3B-202ENST00000316626 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
GSK3B-202ENST00000316626 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
GSK3B-202ENST00000316626 WIZO95785 1651 aa18.47■□□□□ 0.55
GSK3B-202ENST00000316626 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
GSK3B-202ENST00000316626 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
GSK3B-202ENST00000316626 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
GSK3B-202ENST00000316626 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
GSK3B-202ENST00000316626 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
GSK3B-202ENST00000316626 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
GSK3B-202ENST00000316626 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
GSK3B-202ENST00000316626 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
GSK3B-202ENST00000316626 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
GSK3B-202ENST00000316626 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
GSK3B-202ENST00000316626 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
GSK3B-202ENST00000316626 NESP48681 1621 aa17.8■□□□□ 0.44
GSK3B-202ENST00000316626 CFTRP13569 1480 aa17.78■□□□□ 0.44
GSK3B-202ENST00000316626 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
GSK3B-202ENST00000316626 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
GSK3B-202ENST00000316626 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
GSK3B-202ENST00000316626 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
GSK3B-202ENST00000316626 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
GSK3B-202ENST00000316626 ABCC8Q09428 1581 aa17.58■□□□□ 0.41
GSK3B-202ENST00000316626 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
GSK3B-202ENST00000316626 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
GSK3B-202ENST00000316626 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
GSK3B-202ENST00000316626 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
GSK3B-202ENST00000316626 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
GSK3B-202ENST00000316626 CUX1P39880 1505 aa17.43■□□□□ 0.38
GSK3B-202ENST00000316626 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
GSK3B-202ENST00000316626 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
GSK3B-202ENST00000316626 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
GSK3B-202ENST00000316626 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
GSK3B-202ENST00000316626 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
GSK3B-202ENST00000316626 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
GSK3B-202ENST00000316626 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
GSK3B-202ENST00000316626 WDR62O43379 1518 aa17.33■□□□□ 0.37
GSK3B-202ENST00000316626 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
GSK3B-202ENST00000316626 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.35
GSK3B-202ENST00000316626 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
GSK3B-202ENST00000316626 SOGA1O94964 1423 aa17.22■□□□□ 0.35
GSK3B-202ENST00000316626 CUX2O14529 1486 aa17.19■□□□□ 0.34
GSK3B-202ENST00000316626 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
GSK3B-202ENST00000316626 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
GSK3B-202ENST00000316626 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
GSK3B-202ENST00000316626 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
GSK3B-202ENST00000316626 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
GSK3B-202ENST00000316626 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
GSK3B-202ENST00000316626 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
GSK3B-202ENST00000316626 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
GSK3B-202ENST00000316626 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
GSK3B-202ENST00000316626 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
GSK3B-202ENST00000316626 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
GSK3B-202ENST00000316626 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
GSK3B-202ENST00000316626 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
GSK3B-202ENST00000316626 EEA1Q15075 1411 aa17.02■□□□□ 0.31
GSK3B-202ENST00000316626 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
GSK3B-202ENST00000316626 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
GSK3B-202ENST00000316626 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
GSK3B-202ENST00000316626 IGF1RP08069 1367 aa16.94■□□□□ 0.3
GSK3B-202ENST00000316626 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
GSK3B-202ENST00000316626 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
GSK3B-202ENST00000316626 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
GSK3B-202ENST00000316626 CUL7Q14999 1698 aa16.88■□□□□ 0.29
GSK3B-202ENST00000316626 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
GSK3B-202ENST00000316626 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
GSK3B-202ENST00000316626 FBLN2P98095 1184 aa16.85■□□□□ 0.29
GSK3B-202ENST00000316626 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
GSK3B-202ENST00000316626 KIF21BO75037 1637 aa16.84■□□□□ 0.29
GSK3B-202ENST00000316626 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.29
GSK3B-202ENST00000316626 PRXQ9BXM0 1461 aa16.83■□□□□ 0.29
GSK3B-202ENST00000316626 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
GSK3B-202ENST00000316626 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
GSK3B-202ENST00000316626 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
GSK3B-202ENST00000316626 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
GSK3B-202ENST00000316626 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
GSK3B-202ENST00000316626 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
GSK3B-202ENST00000316626 CHD1O14646 1710 aa16.75■□□□□ 0.27
GSK3B-202ENST00000316626 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
GSK3B-202ENST00000316626 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms