RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
TTC9C-202ENST00000316461 ABCC9O60706 1549 aa17.66■□□□□ 0.42
TTC9C-202ENST00000316461 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
TTC9C-202ENST00000316461 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
TTC9C-202ENST00000316461 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
TTC9C-202ENST00000316461 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
TTC9C-202ENST00000316461 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
TTC9C-202ENST00000316461 NACADO15069 1562 aa16.16■□□□□ 0.18
TTC9C-202ENST00000316461 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
TTC9C-202ENST00000316461 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
TTC9C-202ENST00000316461 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
TTC9C-202ENST00000316461 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
TTC9C-202ENST00000316461 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
TTC9C-202ENST00000316461 MYO15BQ96JP2 1530 aa15.69■□□□□ 0.1
TTC9C-202ENST00000316461 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
TTC9C-202ENST00000316461 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
TTC9C-202ENST00000316461 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
TTC9C-202ENST00000316461 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
TTC9C-202ENST00000316461 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
TTC9C-202ENST00000316461 CUX2O14529 1486 aa15.27■□□□□ 0.04
TTC9C-202ENST00000316461 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
TTC9C-202ENST00000316461 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
TTC9C-202ENST00000316461 NESP48681 1621 aa15.05■□□□□ -0
TTC9C-202ENST00000316461 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
TTC9C-202ENST00000316461 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
TTC9C-202ENST00000316461 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
TTC9C-202ENST00000316461 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
TTC9C-202ENST00000316461 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
TTC9C-202ENST00000316461 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
TTC9C-202ENST00000316461 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
TTC9C-202ENST00000316461 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
TTC9C-202ENST00000316461 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
TTC9C-202ENST00000316461 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
TTC9C-202ENST00000316461 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
TTC9C-202ENST00000316461 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
TTC9C-202ENST00000316461 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
TTC9C-202ENST00000316461 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
TTC9C-202ENST00000316461 WDR62O43379 1518 aa14.53□□□□□ -0.08
TTC9C-202ENST00000316461 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.08
TTC9C-202ENST00000316461 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
TTC9C-202ENST00000316461 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
TTC9C-202ENST00000316461 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
TTC9C-202ENST00000316461 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
TTC9C-202ENST00000316461 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
TTC9C-202ENST00000316461 WIZO95785 1651 aa14.39□□□□□ -0.11
TTC9C-202ENST00000316461 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
TTC9C-202ENST00000316461 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
TTC9C-202ENST00000316461 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
TTC9C-202ENST00000316461 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
TTC9C-202ENST00000316461 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.12
TTC9C-202ENST00000316461 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
TTC9C-202ENST00000316461 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
TTC9C-202ENST00000316461 AEBP2Q6ZN18 517 aaPredicted RBP14.27□□□□□ -0.13
TTC9C-202ENST00000316461 CFTRP13569 1480 aa14.23□□□□□ -0.13
TTC9C-202ENST00000316461 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
TTC9C-202ENST00000316461 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
TTC9C-202ENST00000316461 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
TTC9C-202ENST00000316461 FBLN2P98095 1184 aa14.11□□□□□ -0.15
TTC9C-202ENST00000316461 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
TTC9C-202ENST00000316461 CHD1O14646 1710 aa14.08□□□□□ -0.16
TTC9C-202ENST00000316461 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
TTC9C-202ENST00000316461 AQRO60306 1485 aaKnown RBP eCLIP14.07□□□□□ -0.163e-7■■■■■ 33.6
TTC9C-202ENST00000316461 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
TTC9C-202ENST00000316461 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
TTC9C-202ENST00000316461 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
TTC9C-202ENST00000316461 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
TTC9C-202ENST00000316461 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
TTC9C-202ENST00000316461 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
TTC9C-202ENST00000316461 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
TTC9C-202ENST00000316461 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
TTC9C-202ENST00000316461 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.19
TTC9C-202ENST00000316461 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
TTC9C-202ENST00000316461 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
TTC9C-202ENST00000316461 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
TTC9C-202ENST00000316461 SOGA1O94964 1423 aa13.84□□□□□ -0.19
TTC9C-202ENST00000316461 GAPVD1Q14C86 1478 aa13.81□□□□□ -0.2
TTC9C-202ENST00000316461 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
TTC9C-202ENST00000316461 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
TTC9C-202ENST00000316461 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
TTC9C-202ENST00000316461 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
TTC9C-202ENST00000316461 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
TTC9C-202ENST00000316461 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
TTC9C-202ENST00000316461 GRIN2BQ13224 1484 aa13.71□□□□□ -0.21
TTC9C-202ENST00000316461 CUX1P39880 1505 aa13.67□□□□□ -0.22
TTC9C-202ENST00000316461 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
TTC9C-202ENST00000316461 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
TTC9C-202ENST00000316461 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
TTC9C-202ENST00000316461 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
TTC9C-202ENST00000316461 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
TTC9C-202ENST00000316461 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
TTC9C-202ENST00000316461 FAM69CQ0P6D2 419 aa13.57□□□□□ -0.24
TTC9C-202ENST00000316461 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
TTC9C-202ENST00000316461 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.25
TTC9C-202ENST00000316461 ABCA5Q8WWZ7 1642 aa13.51□□□□□ -0.25
TTC9C-202ENST00000316461 NUP160Q12769 1436 aa13.5□□□□□ -0.25
TTC9C-202ENST00000316461 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
TTC9C-202ENST00000316461 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
TTC9C-202ENST00000316461 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
TTC9C-202ENST00000316461 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
TTC9C-202ENST00000316461 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms