RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
MMP1-201ENST00000315274 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
MMP1-201ENST00000315274 ABCC9O60706 1549 aa18.96■□□□□ 0.63
MMP1-201ENST00000315274 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
MMP1-201ENST00000315274 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
MMP1-201ENST00000315274 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
MMP1-201ENST00000315274 NACADO15069 1562 aa18.39■□□□□ 0.53
MMP1-201ENST00000315274 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
MMP1-201ENST00000315274 RB1CC1Q8TDY2 1594 aa18.33■□□□□ 0.53
MMP1-201ENST00000315274 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
MMP1-201ENST00000315274 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
MMP1-201ENST00000315274 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
MMP1-201ENST00000315274 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
MMP1-201ENST00000315274 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
MMP1-201ENST00000315274 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
MMP1-201ENST00000315274 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
MMP1-201ENST00000315274 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
MMP1-201ENST00000315274 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
MMP1-201ENST00000315274 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
MMP1-201ENST00000315274 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
MMP1-201ENST00000315274 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
MMP1-201ENST00000315274 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
MMP1-201ENST00000315274 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
MMP1-201ENST00000315274 WIZO95785 1651 aa17.08■□□□□ 0.32
MMP1-201ENST00000315274 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
MMP1-201ENST00000315274 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
MMP1-201ENST00000315274 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
MMP1-201ENST00000315274 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
MMP1-201ENST00000315274 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
MMP1-201ENST00000315274 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
MMP1-201ENST00000315274 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
MMP1-201ENST00000315274 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
MMP1-201ENST00000315274 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
MMP1-201ENST00000315274 NESP48681 1621 aa16.52■□□□□ 0.23
MMP1-201ENST00000315274 CFTRP13569 1480 aa16.48■□□□□ 0.23
MMP1-201ENST00000315274 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
MMP1-201ENST00000315274 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
MMP1-201ENST00000315274 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
MMP1-201ENST00000315274 FANCD2Q9BXW9 1451 aa16.34■□□□□ 0.21
MMP1-201ENST00000315274 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
MMP1-201ENST00000315274 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
MMP1-201ENST00000315274 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
MMP1-201ENST00000315274 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
MMP1-201ENST00000315274 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
MMP1-201ENST00000315274 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
MMP1-201ENST00000315274 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
MMP1-201ENST00000315274 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.17
MMP1-201ENST00000315274 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
MMP1-201ENST00000315274 CUX1P39880 1505 aa16.13■□□□□ 0.17
MMP1-201ENST00000315274 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
MMP1-201ENST00000315274 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
MMP1-201ENST00000315274 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
MMP1-201ENST00000315274 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
MMP1-201ENST00000315274 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
MMP1-201ENST00000315274 WDR62O43379 1518 aa16.07■□□□□ 0.16
MMP1-201ENST00000315274 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
MMP1-201ENST00000315274 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
MMP1-201ENST00000315274 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
MMP1-201ENST00000315274 SOGA1O94964 1423 aa15.97■□□□□ 0.15
MMP1-201ENST00000315274 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
MMP1-201ENST00000315274 CUX2O14529 1486 aa15.95■□□□□ 0.14
MMP1-201ENST00000315274 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
MMP1-201ENST00000315274 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.14
MMP1-201ENST00000315274 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
MMP1-201ENST00000315274 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
MMP1-201ENST00000315274 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
MMP1-201ENST00000315274 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
MMP1-201ENST00000315274 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
MMP1-201ENST00000315274 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
MMP1-201ENST00000315274 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
MMP1-201ENST00000315274 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
MMP1-201ENST00000315274 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
MMP1-201ENST00000315274 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
MMP1-201ENST00000315274 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
MMP1-201ENST00000315274 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
MMP1-201ENST00000315274 EEA1Q15075 1411 aa15.72■□□□□ 0.11
MMP1-201ENST00000315274 IGF1RP08069 1367 aa15.71■□□□□ 0.11
MMP1-201ENST00000315274 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
MMP1-201ENST00000315274 PBRM1Q86U86 1689 aa15.71■□□□□ 0.1
MMP1-201ENST00000315274 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
MMP1-201ENST00000315274 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
MMP1-201ENST00000315274 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
MMP1-201ENST00000315274 FBLN2P98095 1184 aa15.64■□□□□ 0.09
MMP1-201ENST00000315274 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
MMP1-201ENST00000315274 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
MMP1-201ENST00000315274 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
MMP1-201ENST00000315274 CUL7Q14999 1698 aa15.6■□□□□ 0.09
MMP1-201ENST00000315274 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
MMP1-201ENST00000315274 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
MMP1-201ENST00000315274 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
MMP1-201ENST00000315274 RAPGEF2Q9Y4G8 1499 aa15.56■□□□□ 0.08
MMP1-201ENST00000315274 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
MMP1-201ENST00000315274 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
MMP1-201ENST00000315274 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
MMP1-201ENST00000315274 KIF21BO75037 1637 aa15.53■□□□□ 0.08
MMP1-201ENST00000315274 CHD1O14646 1710 aa15.52■□□□□ 0.07
MMP1-201ENST00000315274 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
MMP1-201ENST00000315274 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
MMP1-201ENST00000315274 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
MMP1-201ENST00000315274 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms