RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
FNDC9-201ENST00000312349 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
FNDC9-201ENST00000312349 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
FNDC9-201ENST00000312349 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
FNDC9-201ENST00000312349 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
FNDC9-201ENST00000312349 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
FNDC9-201ENST00000312349 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
FNDC9-201ENST00000312349 ABCC9O60706 1549 aa20.22■□□□□ 0.83
FNDC9-201ENST00000312349 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
FNDC9-201ENST00000312349 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
FNDC9-201ENST00000312349 NACADO15069 1562 aa19.93■□□□□ 0.78
FNDC9-201ENST00000312349 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
FNDC9-201ENST00000312349 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
FNDC9-201ENST00000312349 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
FNDC9-201ENST00000312349 CECR2Q9BXF3 1484 aa19.59■□□□□ 0.73
FNDC9-201ENST00000312349 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
FNDC9-201ENST00000312349 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
FNDC9-201ENST00000312349 WIZO95785 1651 aa19.38■□□□□ 0.69
FNDC9-201ENST00000312349 BAZ1AQ9NRL2 1556 aaPredicted RBP19.25■□□□□ 0.67
FNDC9-201ENST00000312349 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
FNDC9-201ENST00000312349 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
FNDC9-201ENST00000312349 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
FNDC9-201ENST00000312349 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
FNDC9-201ENST00000312349 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
FNDC9-201ENST00000312349 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
FNDC9-201ENST00000312349 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
FNDC9-201ENST00000312349 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
FNDC9-201ENST00000312349 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
FNDC9-201ENST00000312349 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
FNDC9-201ENST00000312349 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
FNDC9-201ENST00000312349 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
FNDC9-201ENST00000312349 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
FNDC9-201ENST00000312349 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
FNDC9-201ENST00000312349 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
FNDC9-201ENST00000312349 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
FNDC9-201ENST00000312349 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
FNDC9-201ENST00000312349 SOGA1O94964 1423 aa18.51■□□□□ 0.55
FNDC9-201ENST00000312349 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
FNDC9-201ENST00000312349 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
FNDC9-201ENST00000312349 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
FNDC9-201ENST00000312349 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
FNDC9-201ENST00000312349 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
FNDC9-201ENST00000312349 HRCP23327 699 aa18.35■□□□□ 0.53
FNDC9-201ENST00000312349 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
FNDC9-201ENST00000312349 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
FNDC9-201ENST00000312349 EEA1Q15075 1411 aa18.26■□□□□ 0.51
FNDC9-201ENST00000312349 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
FNDC9-201ENST00000312349 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
FNDC9-201ENST00000312349 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
FNDC9-201ENST00000312349 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
FNDC9-201ENST00000312349 CFTRP13569 1480 aa18.2■□□□□ 0.5
FNDC9-201ENST00000312349 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
FNDC9-201ENST00000312349 TNIKQ9UKE5 1360 aa18.18■□□□□ 0.5
FNDC9-201ENST00000312349 CUX1P39880 1505 aa18.16■□□□□ 0.5
FNDC9-201ENST00000312349 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
FNDC9-201ENST00000312349 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
FNDC9-201ENST00000312349 KIF21BO75037 1637 aa18.12■□□□□ 0.49
FNDC9-201ENST00000312349 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
FNDC9-201ENST00000312349 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
FNDC9-201ENST00000312349 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.48
FNDC9-201ENST00000312349 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
FNDC9-201ENST00000312349 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
FNDC9-201ENST00000312349 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
FNDC9-201ENST00000312349 NESP48681 1621 aa17.94■□□□□ 0.46
FNDC9-201ENST00000312349 CLIP1P30622 1438 aa17.94■□□□□ 0.46
FNDC9-201ENST00000312349 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
FNDC9-201ENST00000312349 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
FNDC9-201ENST00000312349 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
FNDC9-201ENST00000312349 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
FNDC9-201ENST00000312349 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
FNDC9-201ENST00000312349 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
FNDC9-201ENST00000312349 CUX2O14529 1486 aa17.84■□□□□ 0.45
FNDC9-201ENST00000312349 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
FNDC9-201ENST00000312349 IGF1RP08069 1367 aa17.78■□□□□ 0.44
FNDC9-201ENST00000312349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
FNDC9-201ENST00000312349 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
FNDC9-201ENST00000312349 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
FNDC9-201ENST00000312349 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
FNDC9-201ENST00000312349 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
FNDC9-201ENST00000312349 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
FNDC9-201ENST00000312349 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
FNDC9-201ENST00000312349 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
FNDC9-201ENST00000312349 ZEB1P37275 1124 aaPredicted RBP17.68■□□□□ 0.42
FNDC9-201ENST00000312349 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
FNDC9-201ENST00000312349 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
FNDC9-201ENST00000312349 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
FNDC9-201ENST00000312349 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
FNDC9-201ENST00000312349 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
FNDC9-201ENST00000312349 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
FNDC9-201ENST00000312349 APLP2Q06481 763 aa17.59■□□□□ 0.41
FNDC9-201ENST00000312349 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
FNDC9-201ENST00000312349 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
FNDC9-201ENST00000312349 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
FNDC9-201ENST00000312349 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
FNDC9-201ENST00000312349 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
FNDC9-201ENST00000312349 CUL7Q14999 1698 aa17.49■□□□□ 0.39
FNDC9-201ENST00000312349 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
FNDC9-201ENST00000312349 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.38
FNDC9-201ENST00000312349 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
FNDC9-201ENST00000312349 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms