RNA–Protein interactions for RNA: ENST00000312108.11

CPT1B-201, Transcript of carnitine palmitoyltransferase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1B, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1B-201ENST00000312108 NISCHQ9Y2I1 1504 aa21.15■□□□□ 0.98
CPT1B-201ENST00000312108 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
CPT1B-201ENST00000312108 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
CPT1B-201ENST00000312108 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
CPT1B-201ENST00000312108 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
CPT1B-201ENST00000312108 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
CPT1B-201ENST00000312108 ABCC9O60706 1549 aa17.15■□□□□ 0.34
CPT1B-201ENST00000312108 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CPT1B-201ENST00000312108 MYO15BQ96JP2 1530 aa17.04■□□□□ 0.32
CPT1B-201ENST00000312108 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
CPT1B-201ENST00000312108 NACADO15069 1562 aa16.92■□□□□ 0.3
CPT1B-201ENST00000312108 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
CPT1B-201ENST00000312108 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
CPT1B-201ENST00000312108 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
CPT1B-201ENST00000312108 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
CPT1B-201ENST00000312108 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
CPT1B-201ENST00000312108 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
CPT1B-201ENST00000312108 WIZO95785 1651 aa16.33■□□□□ 0.21
CPT1B-201ENST00000312108 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
CPT1B-201ENST00000312108 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
CPT1B-201ENST00000312108 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■■■□□ 17
CPT1B-201ENST00000312108 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
CPT1B-201ENST00000312108 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
CPT1B-201ENST00000312108 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
CPT1B-201ENST00000312108 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
CPT1B-201ENST00000312108 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
CPT1B-201ENST00000312108 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
CPT1B-201ENST00000312108 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
CPT1B-201ENST00000312108 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
CPT1B-201ENST00000312108 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
CPT1B-201ENST00000312108 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
CPT1B-201ENST00000312108 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
CPT1B-201ENST00000312108 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
CPT1B-201ENST00000312108 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
CPT1B-201ENST00000312108 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
CPT1B-201ENST00000312108 NCAPD3P42695 1498 aa15.63■□□□□ 0.09
CPT1B-201ENST00000312108 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
CPT1B-201ENST00000312108 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
CPT1B-201ENST00000312108 SOGA1O94964 1423 aa15.54■□□□□ 0.08
CPT1B-201ENST00000312108 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
CPT1B-201ENST00000312108 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
CPT1B-201ENST00000312108 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
CPT1B-201ENST00000312108 EEA1Q15075 1411 aa15.42■□□□□ 0.06
CPT1B-201ENST00000312108 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
CPT1B-201ENST00000312108 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
CPT1B-201ENST00000312108 CFTRP13569 1480 aa15.39■□□□□ 0.05
CPT1B-201ENST00000312108 BIVM-ERCC5R4GMW8 1640 aa15.37■□□□□ 0.05
CPT1B-201ENST00000312108 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
CPT1B-201ENST00000312108 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.05
CPT1B-201ENST00000312108 CUX1P39880 1505 aa15.32■□□□□ 0.04
CPT1B-201ENST00000312108 GOLGA3Q08378 1498 aa15.29■□□□□ 0.04
CPT1B-201ENST00000312108 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
CPT1B-201ENST00000312108 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
CPT1B-201ENST00000312108 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
CPT1B-201ENST00000312108 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
CPT1B-201ENST00000312108 KIF21BO75037 1637 aa15.26■□□□□ 0.03
CPT1B-201ENST00000312108 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
CPT1B-201ENST00000312108 HRCP23327 699 aa15.25■□□□□ 0.03
CPT1B-201ENST00000312108 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
CPT1B-201ENST00000312108 RAPGEF2Q9Y4G8 1499 aa15.19■□□□□ 0.02
CPT1B-201ENST00000312108 NESP48681 1621 aa15.17■□□□□ 0.02
CPT1B-201ENST00000312108 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
CPT1B-201ENST00000312108 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
CPT1B-201ENST00000312108 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
CPT1B-201ENST00000312108 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
CPT1B-201ENST00000312108 PRXQ9BXM0 1461 aa15.1■□□□□ 0.01
CPT1B-201ENST00000312108 CLIP1P30622 1438 aa15.09■□□□□ 0.01
CPT1B-201ENST00000312108 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0
CPT1B-201ENST00000312108 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
CPT1B-201ENST00000312108 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
CPT1B-201ENST00000312108 CUX2O14529 1486 aa15.07■□□□□ 0
CPT1B-201ENST00000312108 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
CPT1B-201ENST00000312108 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
CPT1B-201ENST00000312108 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
CPT1B-201ENST00000312108 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
CPT1B-201ENST00000312108 IGF1RP08069 1367 aa14.98□□□□□ -0.01
CPT1B-201ENST00000312108 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
CPT1B-201ENST00000312108 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
CPT1B-201ENST00000312108 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
CPT1B-201ENST00000312108 URB2Q14146 1524 aaKnown RBP14.96□□□□□ -0.01
CPT1B-201ENST00000312108 PDS5BQ9NTI5 1447 aa14.94□□□□□ -0.02
CPT1B-201ENST00000312108 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
CPT1B-201ENST00000312108 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
CPT1B-201ENST00000312108 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
CPT1B-201ENST00000312108 WDR97A6NE52 1622 aa14.88□□□□□ -0.03
CPT1B-201ENST00000312108 ARHGAP35Q9NRY4 1499 aa14.85□□□□□ -0.03
CPT1B-201ENST00000312108 APLP2Q06481 763 aa14.85□□□□□ -0.03
CPT1B-201ENST00000312108 CUL7Q14999 1698 aa14.81□□□□□ -0.04
CPT1B-201ENST00000312108 TDRD9Q8NDG6 1382 aaKnown RBP14.81□□□□□ -0.04
CPT1B-201ENST00000312108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
CPT1B-201ENST00000312108 ZEB1P37275 1124 aaPredicted RBP14.8□□□□□ -0.04
CPT1B-201ENST00000312108 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
CPT1B-201ENST00000312108 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
CPT1B-201ENST00000312108 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
CPT1B-201ENST00000312108 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
CPT1B-201ENST00000312108 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
CPT1B-201ENST00000312108 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
CPT1B-201ENST00000312108 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
CPT1B-201ENST00000312108 P3H3Q8IVL6 736 aa14.71□□□□□ -0.06
CPT1B-201ENST00000312108 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms