RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
CHRNA9-201ENST00000310169 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
CHRNA9-201ENST00000310169 ABCC9O60706 1549 aa20.06■□□□□ 0.8
CHRNA9-201ENST00000310169 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
CHRNA9-201ENST00000310169 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
CHRNA9-201ENST00000310169 NACADO15069 1562 aa19.31■□□□□ 0.68
CHRNA9-201ENST00000310169 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
CHRNA9-201ENST00000310169 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
CHRNA9-201ENST00000310169 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
CHRNA9-201ENST00000310169 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
CHRNA9-201ENST00000310169 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
CHRNA9-201ENST00000310169 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHRNA9-201ENST00000310169 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
CHRNA9-201ENST00000310169 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
CHRNA9-201ENST00000310169 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
CHRNA9-201ENST00000310169 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
CHRNA9-201ENST00000310169 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
CHRNA9-201ENST00000310169 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
CHRNA9-201ENST00000310169 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
CHRNA9-201ENST00000310169 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
CHRNA9-201ENST00000310169 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
CHRNA9-201ENST00000310169 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
CHRNA9-201ENST00000310169 SMARCA2P51531 1590 aa17.84■□□□□ 0.45
CHRNA9-201ENST00000310169 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
CHRNA9-201ENST00000310169 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
CHRNA9-201ENST00000310169 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
CHRNA9-201ENST00000310169 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
CHRNA9-201ENST00000310169 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
CHRNA9-201ENST00000310169 WIZO95785 1651 aa17.7■□□□□ 0.42
CHRNA9-201ENST00000310169 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
CHRNA9-201ENST00000310169 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
CHRNA9-201ENST00000310169 NESP48681 1621 aa17.37■□□□□ 0.37
CHRNA9-201ENST00000310169 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
CHRNA9-201ENST00000310169 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
CHRNA9-201ENST00000310169 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
CHRNA9-201ENST00000310169 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
CHRNA9-201ENST00000310169 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
CHRNA9-201ENST00000310169 CFTRP13569 1480 aa17.22■□□□□ 0.35
CHRNA9-201ENST00000310169 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
CHRNA9-201ENST00000310169 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
CHRNA9-201ENST00000310169 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
CHRNA9-201ENST00000310169 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
CHRNA9-201ENST00000310169 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
CHRNA9-201ENST00000310169 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
CHRNA9-201ENST00000310169 CUX2O14529 1486 aa17.02■□□□□ 0.32
CHRNA9-201ENST00000310169 WDR62O43379 1518 aa16.95■□□□□ 0.3
CHRNA9-201ENST00000310169 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
CHRNA9-201ENST00000310169 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
CHRNA9-201ENST00000310169 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
CHRNA9-201ENST00000310169 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.29
CHRNA9-201ENST00000310169 CUX1P39880 1505 aa16.76■□□□□ 0.27
CHRNA9-201ENST00000310169 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
CHRNA9-201ENST00000310169 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
CHRNA9-201ENST00000310169 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
CHRNA9-201ENST00000310169 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
CHRNA9-201ENST00000310169 SOGA1O94964 1423 aa16.69■□□□□ 0.26
CHRNA9-201ENST00000310169 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
CHRNA9-201ENST00000310169 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
CHRNA9-201ENST00000310169 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
CHRNA9-201ENST00000310169 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
CHRNA9-201ENST00000310169 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
CHRNA9-201ENST00000310169 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
CHRNA9-201ENST00000310169 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
CHRNA9-201ENST00000310169 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHRNA9-201ENST00000310169 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
CHRNA9-201ENST00000310169 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
CHRNA9-201ENST00000310169 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
CHRNA9-201ENST00000310169 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
CHRNA9-201ENST00000310169 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
CHRNA9-201ENST00000310169 FBLN2P98095 1184 aa16.46■□□□□ 0.23
CHRNA9-201ENST00000310169 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
CHRNA9-201ENST00000310169 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
CHRNA9-201ENST00000310169 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
CHRNA9-201ENST00000310169 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
CHRNA9-201ENST00000310169 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
CHRNA9-201ENST00000310169 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
CHRNA9-201ENST00000310169 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
CHRNA9-201ENST00000310169 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
CHRNA9-201ENST00000310169 KIF27Q86VH2 1401 aa16.38■□□□□ 0.21
CHRNA9-201ENST00000310169 CHD1O14646 1710 aa16.36■□□□□ 0.21
CHRNA9-201ENST00000310169 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
CHRNA9-201ENST00000310169 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
CHRNA9-201ENST00000310169 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
CHRNA9-201ENST00000310169 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
CHRNA9-201ENST00000310169 IGF1RP08069 1367 aa16.28■□□□□ 0.2
CHRNA9-201ENST00000310169 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
CHRNA9-201ENST00000310169 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
CHRNA9-201ENST00000310169 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
CHRNA9-201ENST00000310169 CUL7Q14999 1698 aa16.22■□□□□ 0.19
CHRNA9-201ENST00000310169 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
CHRNA9-201ENST00000310169 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
CHRNA9-201ENST00000310169 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
CHRNA9-201ENST00000310169 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.17
CHRNA9-201ENST00000310169 NUP160Q12769 1436 aa16.14■□□□□ 0.17
CHRNA9-201ENST00000310169 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
CHRNA9-201ENST00000310169 EEA1Q15075 1411 aa16.12■□□□□ 0.17
CHRNA9-201ENST00000310169 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
CHRNA9-201ENST00000310169 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
CHRNA9-201ENST00000310169 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.16
CHRNA9-201ENST00000310169 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms