RNA–Protein interactions for RNA: ENST00000308128.8

DSG4-201, Transcript of desmoglein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG4, Length 3,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG4-201ENST00000308128 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
DSG4-201ENST00000308128 CCDC180Q9P1Z9 1646 aa18.15■□□□□ 0.5
DSG4-201ENST00000308128 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
DSG4-201ENST00000308128 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
DSG4-201ENST00000308128 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
DSG4-201ENST00000308128 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
DSG4-201ENST00000308128 ABCC9O60706 1549 aa16.75■□□□□ 0.27
DSG4-201ENST00000308128 NACADO15069 1562 aa16.7■□□□□ 0.26
DSG4-201ENST00000308128 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
DSG4-201ENST00000308128 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
DSG4-201ENST00000308128 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
DSG4-201ENST00000308128 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
DSG4-201ENST00000308128 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
DSG4-201ENST00000308128 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
DSG4-201ENST00000308128 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
DSG4-201ENST00000308128 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.18
DSG4-201ENST00000308128 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
DSG4-201ENST00000308128 WIZO95785 1651 aa16.1■□□□□ 0.17
DSG4-201ENST00000308128 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
DSG4-201ENST00000308128 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.15
DSG4-201ENST00000308128 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
DSG4-201ENST00000308128 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
DSG4-201ENST00000308128 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
DSG4-201ENST00000308128 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
DSG4-201ENST00000308128 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
DSG4-201ENST00000308128 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
DSG4-201ENST00000308128 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
DSG4-201ENST00000308128 ATAD2BQ9ULI0 1458 aa15.61■□□□□ 0.09
DSG4-201ENST00000308128 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
DSG4-201ENST00000308128 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
DSG4-201ENST00000308128 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
DSG4-201ENST00000308128 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
DSG4-201ENST00000308128 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
DSG4-201ENST00000308128 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
DSG4-201ENST00000308128 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
DSG4-201ENST00000308128 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
DSG4-201ENST00000308128 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
DSG4-201ENST00000308128 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
DSG4-201ENST00000308128 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
DSG4-201ENST00000308128 CFTRP13569 1480 aa15.16■□□□□ 0.02
DSG4-201ENST00000308128 RUSC2Q8N2Y8 1516 aa15.16■□□□□ 0.02
DSG4-201ENST00000308128 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
DSG4-201ENST00000308128 SOGA1O94964 1423 aa15.14■□□□□ 0.01
DSG4-201ENST00000308128 CUX1P39880 1505 aa15.09■□□□□ 0.01
DSG4-201ENST00000308128 FAM9AQ8IZU1 332 aaPredicted RBP15.02■□□□□ -0
DSG4-201ENST00000308128 KIF21BO75037 1637 aa15.02□□□□□ -0.01
DSG4-201ENST00000308128 EEA1Q15075 1411 aa14.99□□□□□ -0.01
DSG4-201ENST00000308128 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
DSG4-201ENST00000308128 NESP48681 1621 aa14.9□□□□□ -0.02
DSG4-201ENST00000308128 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
DSG4-201ENST00000308128 WDR97A6NE52 1622 aa14.87□□□□□ -0.03
DSG4-201ENST00000308128 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
DSG4-201ENST00000308128 PCGF6Q9BYE7 350 aa14.87□□□□□ -0.03
DSG4-201ENST00000308128 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
DSG4-201ENST00000308128 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
DSG4-201ENST00000308128 TNIKQ9UKE5 1360 aa14.84□□□□□ -0.03
DSG4-201ENST00000308128 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
DSG4-201ENST00000308128 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.04
DSG4-201ENST00000308128 PRXQ9BXM0 1461 aa14.83□□□□□ -0.04
DSG4-201ENST00000308128 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
DSG4-201ENST00000308128 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
DSG4-201ENST00000308128 CEP162Q5TB80 1403 aa14.82□□□□□ -0.04
DSG4-201ENST00000308128 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
DSG4-201ENST00000308128 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
DSG4-201ENST00000308128 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
DSG4-201ENST00000308128 FGD5Q6ZNL6 1462 aa14.79□□□□□ -0.04
DSG4-201ENST00000308128 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
DSG4-201ENST00000308128 TOPBP1Q92547 1522 aa14.76□□□□□ -0.05
DSG4-201ENST00000308128 POLA1P09884 1462 aaPredicted RBP14.71□□□□□ -0.05
DSG4-201ENST00000308128 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
DSG4-201ENST00000308128 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
DSG4-201ENST00000308128 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
DSG4-201ENST00000308128 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
DSG4-201ENST00000308128 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
DSG4-201ENST00000308128 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
DSG4-201ENST00000308128 CUX2O14529 1486 aa14.65□□□□□ -0.06
DSG4-201ENST00000308128 IGF1RP08069 1367 aa14.63□□□□□ -0.07
DSG4-201ENST00000308128 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
DSG4-201ENST00000308128 TRIM26Q12899 539 aaPredicted RBP14.62□□□□□ -0.07
DSG4-201ENST00000308128 CUL7Q14999 1698 aa14.59□□□□□ -0.07
DSG4-201ENST00000308128 CLIP1P30622 1438 aa14.58□□□□□ -0.07
DSG4-201ENST00000308128 CTTNBP2Q8WZ74 1663 aa14.57□□□□□ -0.08
DSG4-201ENST00000308128 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
DSG4-201ENST00000308128 HRCP23327 699 aa14.56□□□□□ -0.08
DSG4-201ENST00000308128 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
DSG4-201ENST00000308128 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
DSG4-201ENST00000308128 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
DSG4-201ENST00000308128 WDR62O43379 1518 aa14.54□□□□□ -0.08
DSG4-201ENST00000308128 ARHGAP35Q9NRY4 1499 aa14.53□□□□□ -0.08
DSG4-201ENST00000308128 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.08
DSG4-201ENST00000308128 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
DSG4-201ENST00000308128 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
DSG4-201ENST00000308128 LRRIQ1Q96JM4 1722 aa14.45□□□□□ -0.1
DSG4-201ENST00000308128 SAMD9Q5K651 1589 aa14.42□□□□□ -0.1
DSG4-201ENST00000308128 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
DSG4-201ENST00000308128 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
DSG4-201ENST00000308128 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
DSG4-201ENST00000308128 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
DSG4-201ENST00000308128 PCF11O94913 1555 aaKnown RBP14.37□□□□□ -0.11
DSG4-201ENST00000308128 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms