RNA–Protein interactions for RNA: ENST00000306888.6

LNX1-202, Transcript of ligand of numb-protein X 1, humanhuman

TSL 1 (best) BASIC

Gene LNX1, Length 3,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1-202ENST00000306888 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
LNX1-202ENST00000306888 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
LNX1-202ENST00000306888 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
LNX1-202ENST00000306888 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
LNX1-202ENST00000306888 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
LNX1-202ENST00000306888 NACADO15069 1562 aa13.98□□□□□ -0.17
LNX1-202ENST00000306888 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
LNX1-202ENST00000306888 ABCC9O60706 1549 aa13.84□□□□□ -0.19
LNX1-202ENST00000306888 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
LNX1-202ENST00000306888 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
LNX1-202ENST00000306888 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
LNX1-202ENST00000306888 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
LNX1-202ENST00000306888 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
LNX1-202ENST00000306888 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
LNX1-202ENST00000306888 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
LNX1-202ENST00000306888 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
LNX1-202ENST00000306888 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
LNX1-202ENST00000306888 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
LNX1-202ENST00000306888 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
LNX1-202ENST00000306888 WIZO95785 1651 aa13.21□□□□□ -0.29
LNX1-202ENST00000306888 PEG3Q9GZU2 1588 aa13.21□□□□□ -0.29
LNX1-202ENST00000306888 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
LNX1-202ENST00000306888 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.31
LNX1-202ENST00000306888 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
LNX1-202ENST00000306888 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
LNX1-202ENST00000306888 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
LNX1-202ENST00000306888 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
LNX1-202ENST00000306888 CCDC88BA6NC98 1476 aa12.93□□□□□ -0.34
LNX1-202ENST00000306888 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
LNX1-202ENST00000306888 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
LNX1-202ENST00000306888 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
LNX1-202ENST00000306888 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
LNX1-202ENST00000306888 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
LNX1-202ENST00000306888 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
LNX1-202ENST00000306888 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
LNX1-202ENST00000306888 BIVM-ERCC5R4GMW8 1640 aa12.61□□□□□ -0.39
LNX1-202ENST00000306888 CFTRP13569 1480 aa12.61□□□□□ -0.39
LNX1-202ENST00000306888 EEA1Q15075 1411 aa12.6□□□□□ -0.39
LNX1-202ENST00000306888 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
LNX1-202ENST00000306888 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
LNX1-202ENST00000306888 TOP2BQ02880 1626 aa12.59□□□□□ -0.39
LNX1-202ENST00000306888 LOC105371045A0A1W2PR82 267 aa12.47□□□□□ -0.41
LNX1-202ENST00000306888 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
LNX1-202ENST00000306888 KIF21BO75037 1637 aa12.46□□□□□ -0.41
LNX1-202ENST00000306888 CUX1P39880 1505 aa12.45□□□□□ -0.42
LNX1-202ENST00000306888 SOGA1O94964 1423 aa12.44□□□□□ -0.42
LNX1-202ENST00000306888 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
LNX1-202ENST00000306888 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
LNX1-202ENST00000306888 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
LNX1-202ENST00000306888 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
LNX1-202ENST00000306888 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
LNX1-202ENST00000306888 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
LNX1-202ENST00000306888 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
LNX1-202ENST00000306888 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
LNX1-202ENST00000306888 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
LNX1-202ENST00000306888 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
LNX1-202ENST00000306888 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
LNX1-202ENST00000306888 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
LNX1-202ENST00000306888 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
LNX1-202ENST00000306888 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
LNX1-202ENST00000306888 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
LNX1-202ENST00000306888 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
LNX1-202ENST00000306888 NESP48681 1621 aa12.24□□□□□ -0.45
LNX1-202ENST00000306888 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
LNX1-202ENST00000306888 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
LNX1-202ENST00000306888 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
LNX1-202ENST00000306888 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
LNX1-202ENST00000306888 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
LNX1-202ENST00000306888 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
LNX1-202ENST00000306888 CUL7Q14999 1698 aa12.16□□□□□ -0.46
LNX1-202ENST00000306888 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
LNX1-202ENST00000306888 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
LNX1-202ENST00000306888 CUX2O14529 1486 aa12.15□□□□□ -0.46
LNX1-202ENST00000306888 IGF1RP08069 1367 aa12.13□□□□□ -0.47
LNX1-202ENST00000306888 TARBP1Q13395 1621 aaKnown RBP12.12□□□□□ -0.47
LNX1-202ENST00000306888 CLIP1P30622 1438 aa12.1□□□□□ -0.47
LNX1-202ENST00000306888 WDR62O43379 1518 aa12.09□□□□□ -0.47
LNX1-202ENST00000306888 MRC2Q9UBG0 1479 aa12.09□□□□□ -0.47
LNX1-202ENST00000306888 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
LNX1-202ENST00000306888 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
LNX1-202ENST00000306888 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
LNX1-202ENST00000306888 RAD54L2Q9Y4B4 1467 aa12.06□□□□□ -0.48
LNX1-202ENST00000306888 PCGF6Q9BYE7 350 aa12.05□□□□□ -0.48
LNX1-202ENST00000306888 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
LNX1-202ENST00000306888 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
LNX1-202ENST00000306888 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
LNX1-202ENST00000306888 PBRM1Q86U86 1689 aa12.02□□□□□ -0.48
LNX1-202ENST00000306888 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
LNX1-202ENST00000306888 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
LNX1-202ENST00000306888 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
LNX1-202ENST00000306888 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
LNX1-202ENST00000306888 EFCAB5A4FU69 1503 aa11.99□□□□□ -0.49
LNX1-202ENST00000306888 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
LNX1-202ENST00000306888 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
LNX1-202ENST00000306888 HRCP23327 699 aa11.97□□□□□ -0.49
LNX1-202ENST00000306888 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
LNX1-202ENST00000306888 SAMD9Q5K651 1589 aa11.94□□□□□ -0.5
LNX1-202ENST00000306888 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.5
LNX1-202ENST00000306888 CFAP43Q8NDM7 1665 aa11.9□□□□□ -0.5
LNX1-202ENST00000306888 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms