RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
CCDC7-202ENST00000302316 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
CCDC7-202ENST00000302316 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
CCDC7-202ENST00000302316 ABCC9O60706 1549 aa24.68■■□□□ 1.54
CCDC7-202ENST00000302316 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.52
CCDC7-202ENST00000302316 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
CCDC7-202ENST00000302316 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
CCDC7-202ENST00000302316 NACADO15069 1562 aa24.21■■□□□ 1.47
CCDC7-202ENST00000302316 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
CCDC7-202ENST00000302316 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
CCDC7-202ENST00000302316 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
CCDC7-202ENST00000302316 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
CCDC7-202ENST00000302316 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
CCDC7-202ENST00000302316 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCDC7-202ENST00000302316 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
CCDC7-202ENST00000302316 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
CCDC7-202ENST00000302316 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
CCDC7-202ENST00000302316 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
CCDC7-202ENST00000302316 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
CCDC7-202ENST00000302316 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
CCDC7-202ENST00000302316 WIZO95785 1651 aa22.76■■□□□ 1.23
CCDC7-202ENST00000302316 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
CCDC7-202ENST00000302316 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
CCDC7-202ENST00000302316 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
CCDC7-202ENST00000302316 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
CCDC7-202ENST00000302316 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
CCDC7-202ENST00000302316 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
CCDC7-202ENST00000302316 NCAPD3P42695 1498 aa22.33■■□□□ 1.17
CCDC7-202ENST00000302316 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
CCDC7-202ENST00000302316 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
CCDC7-202ENST00000302316 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
CCDC7-202ENST00000302316 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
CCDC7-202ENST00000302316 CFTRP13569 1480 aa21.81■■□□□ 1.08
CCDC7-202ENST00000302316 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
CCDC7-202ENST00000302316 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
CCDC7-202ENST00000302316 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
CCDC7-202ENST00000302316 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
CCDC7-202ENST00000302316 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
CCDC7-202ENST00000302316 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
CCDC7-202ENST00000302316 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
CCDC7-202ENST00000302316 NESP48681 1621 aa21.61■■□□□ 1.05
CCDC7-202ENST00000302316 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
CCDC7-202ENST00000302316 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
CCDC7-202ENST00000302316 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
CCDC7-202ENST00000302316 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
CCDC7-202ENST00000302316 CUX1P39880 1505 aa21.47■■□□□ 1.03
CCDC7-202ENST00000302316 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
CCDC7-202ENST00000302316 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
CCDC7-202ENST00000302316 FAM9AQ8IZU1 332 aaPredicted RBP21.41■■□□□ 1.02
CCDC7-202ENST00000302316 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
CCDC7-202ENST00000302316 SOGA1O94964 1423 aa21.35■■□□□ 1.01
CCDC7-202ENST00000302316 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
CCDC7-202ENST00000302316 EEA1Q15075 1411 aa21.29■■□□□ 1
CCDC7-202ENST00000302316 TOPBP1Q92547 1522 aa21.29■■□□□ 1
CCDC7-202ENST00000302316 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
CCDC7-202ENST00000302316 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
CCDC7-202ENST00000302316 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
CCDC7-202ENST00000302316 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
CCDC7-202ENST00000302316 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
CCDC7-202ENST00000302316 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
CCDC7-202ENST00000302316 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
CCDC7-202ENST00000302316 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
CCDC7-202ENST00000302316 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
CCDC7-202ENST00000302316 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
CCDC7-202ENST00000302316 CUX2O14529 1486 aa21.11■□□□□ 0.97
CCDC7-202ENST00000302316 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
CCDC7-202ENST00000302316 WDR62O43379 1518 aa21.08■□□□□ 0.97
CCDC7-202ENST00000302316 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
CCDC7-202ENST00000302316 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
CCDC7-202ENST00000302316 KIF21BO75037 1637 aa21.03■□□□□ 0.96
CCDC7-202ENST00000302316 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
CCDC7-202ENST00000302316 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
CCDC7-202ENST00000302316 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
CCDC7-202ENST00000302316 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
CCDC7-202ENST00000302316 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
CCDC7-202ENST00000302316 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
CCDC7-202ENST00000302316 IGF1RP08069 1367 aa20.92■□□□□ 0.94
CCDC7-202ENST00000302316 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
CCDC7-202ENST00000302316 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
CCDC7-202ENST00000302316 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
CCDC7-202ENST00000302316 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
CCDC7-202ENST00000302316 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
CCDC7-202ENST00000302316 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
CCDC7-202ENST00000302316 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
CCDC7-202ENST00000302316 CUL7Q14999 1698 aa20.82■□□□□ 0.92
CCDC7-202ENST00000302316 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
CCDC7-202ENST00000302316 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCDC7-202ENST00000302316 CEP162Q5TB80 1403 aa20.79■□□□□ 0.92
CCDC7-202ENST00000302316 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
CCDC7-202ENST00000302316 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
CCDC7-202ENST00000302316 GRIN2BQ13224 1484 aa20.73■□□□□ 0.91
CCDC7-202ENST00000302316 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
CCDC7-202ENST00000302316 CLIP1P30622 1438 aa20.66■□□□□ 0.9
CCDC7-202ENST00000302316 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
CCDC7-202ENST00000302316 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
CCDC7-202ENST00000302316 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
CCDC7-202ENST00000302316 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
CCDC7-202ENST00000302316 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
CCDC7-202ENST00000302316 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
CCDC7-202ENST00000302316 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms