RNA–Protein interactions for RNA: ENST00000299906.5

FAM199X-201, Transcript of family with sequence similarity 199, X-linked, humanhuman

TSL 1 (best)

Gene FAM199X, Length 2,237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM199X-201ENST00000299906 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
FAM199X-201ENST00000299906 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
FAM199X-201ENST00000299906 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
FAM199X-201ENST00000299906 ABCC9O60706 1549 aa18.58■□□□□ 0.57
FAM199X-201ENST00000299906 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
FAM199X-201ENST00000299906 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
FAM199X-201ENST00000299906 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
FAM199X-201ENST00000299906 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
FAM199X-201ENST00000299906 NACADO15069 1562 aa17.99■□□□□ 0.47
FAM199X-201ENST00000299906 RB1CC1Q8TDY2 1594 aa17.88■□□□□ 0.45
FAM199X-201ENST00000299906 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
FAM199X-201ENST00000299906 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
FAM199X-201ENST00000299906 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
FAM199X-201ENST00000299906 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
FAM199X-201ENST00000299906 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
FAM199X-201ENST00000299906 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
FAM199X-201ENST00000299906 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
FAM199X-201ENST00000299906 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
FAM199X-201ENST00000299906 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
FAM199X-201ENST00000299906 SMARCA4P51532 1647 aa17.02■□□□□ 0.32
FAM199X-201ENST00000299906 WIZO95785 1651 aa16.99■□□□□ 0.31
FAM199X-201ENST00000299906 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
FAM199X-201ENST00000299906 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
FAM199X-201ENST00000299906 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
FAM199X-201ENST00000299906 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
FAM199X-201ENST00000299906 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
FAM199X-201ENST00000299906 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
FAM199X-201ENST00000299906 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
FAM199X-201ENST00000299906 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
FAM199X-201ENST00000299906 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
FAM199X-201ENST00000299906 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
FAM199X-201ENST00000299906 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
FAM199X-201ENST00000299906 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
FAM199X-201ENST00000299906 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
FAM199X-201ENST00000299906 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
FAM199X-201ENST00000299906 CFTRP13569 1480 aa16.28■□□□□ 0.2
FAM199X-201ENST00000299906 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
FAM199X-201ENST00000299906 NESP48681 1621 aa16.24■□□□□ 0.19
FAM199X-201ENST00000299906 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
FAM199X-201ENST00000299906 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
FAM199X-201ENST00000299906 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
FAM199X-201ENST00000299906 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
FAM199X-201ENST00000299906 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
FAM199X-201ENST00000299906 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
FAM199X-201ENST00000299906 SOGA1O94964 1423 aa16.06■□□□□ 0.16
FAM199X-201ENST00000299906 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
FAM199X-201ENST00000299906 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
FAM199X-201ENST00000299906 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
FAM199X-201ENST00000299906 CUX1P39880 1505 aa16.03■□□□□ 0.16
FAM199X-201ENST00000299906 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
FAM199X-201ENST00000299906 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
FAM199X-201ENST00000299906 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
FAM199X-201ENST00000299906 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
FAM199X-201ENST00000299906 EEA1Q15075 1411 aa15.98■□□□□ 0.15
FAM199X-201ENST00000299906 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
FAM199X-201ENST00000299906 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
FAM199X-201ENST00000299906 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
FAM199X-201ENST00000299906 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
FAM199X-201ENST00000299906 FGD5Q6ZNL6 1462 aa15.87■□□□□ 0.13
FAM199X-201ENST00000299906 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
FAM199X-201ENST00000299906 DNMBPQ6XZF7 1577 aa15.86■□□□□ 0.13
FAM199X-201ENST00000299906 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
FAM199X-201ENST00000299906 KIF27Q86VH2 1401 aa15.83■□□□□ 0.12
FAM199X-201ENST00000299906 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
FAM199X-201ENST00000299906 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
FAM199X-201ENST00000299906 CUX2O14529 1486 aa15.79■□□□□ 0.12
FAM199X-201ENST00000299906 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
FAM199X-201ENST00000299906 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
FAM199X-201ENST00000299906 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.12
FAM199X-201ENST00000299906 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
FAM199X-201ENST00000299906 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
FAM199X-201ENST00000299906 KIF21BO75037 1637 aa15.72■□□□□ 0.11
FAM199X-201ENST00000299906 IGF1RP08069 1367 aa15.72■□□□□ 0.11
FAM199X-201ENST00000299906 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
FAM199X-201ENST00000299906 WDR62O43379 1518 aa15.71■□□□□ 0.11
FAM199X-201ENST00000299906 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
FAM199X-201ENST00000299906 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
FAM199X-201ENST00000299906 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
FAM199X-201ENST00000299906 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
FAM199X-201ENST00000299906 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
FAM199X-201ENST00000299906 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
FAM199X-201ENST00000299906 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
FAM199X-201ENST00000299906 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
FAM199X-201ENST00000299906 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
FAM199X-201ENST00000299906 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
FAM199X-201ENST00000299906 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
FAM199X-201ENST00000299906 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
FAM199X-201ENST00000299906 CLIP1P30622 1438 aa15.55■□□□□ 0.08
FAM199X-201ENST00000299906 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
FAM199X-201ENST00000299906 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
FAM199X-201ENST00000299906 CUL7Q14999 1698 aa15.48■□□□□ 0.07
FAM199X-201ENST00000299906 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
FAM199X-201ENST00000299906 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
FAM199X-201ENST00000299906 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
FAM199X-201ENST00000299906 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
FAM199X-201ENST00000299906 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
FAM199X-201ENST00000299906 FHAD1B1AJZ9 1412 aa15.41■□□□□ 0.06
FAM199X-201ENST00000299906 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
FAM199X-201ENST00000299906 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
FAM199X-201ENST00000299906 ARHGAP35Q9NRY4 1499 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms