RNA–Protein interactions for RNA: ENST00000290524.8

RFX5-201, Transcript of regulatory factor X5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX5, Length 3,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5-201ENST00000290524 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
RFX5-201ENST00000290524 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
RFX5-201ENST00000290524 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
RFX5-201ENST00000290524 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
RFX5-201ENST00000290524 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.12
RFX5-201ENST00000290524 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
RFX5-201ENST00000290524 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
RFX5-201ENST00000290524 NACADO15069 1562 aa13.97□□□□□ -0.17
RFX5-201ENST00000290524 ABCC9O60706 1549 aa13.9□□□□□ -0.18
RFX5-201ENST00000290524 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
RFX5-201ENST00000290524 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
RFX5-201ENST00000290524 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
RFX5-201ENST00000290524 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
RFX5-201ENST00000290524 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
RFX5-201ENST00000290524 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
RFX5-201ENST00000290524 MYT1Q01538 1121 aa13.48□□□□□ -0.25
RFX5-201ENST00000290524 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
RFX5-201ENST00000290524 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
RFX5-201ENST00000290524 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
RFX5-201ENST00000290524 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
RFX5-201ENST00000290524 WIZO95785 1651 aa13.37□□□□□ -0.27
RFX5-201ENST00000290524 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
RFX5-201ENST00000290524 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
RFX5-201ENST00000290524 HRCP23327 699 aa13.31□□□□□ -0.28
RFX5-201ENST00000290524 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
RFX5-201ENST00000290524 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
RFX5-201ENST00000290524 TOP2AP11388 1531 aaKnown RBP13.26□□□□□ -0.29
RFX5-201ENST00000290524 PPARGC1BQ86YN6 1023 aaKnown RBP13.21□□□□□ -0.29
RFX5-201ENST00000290524 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
RFX5-201ENST00000290524 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
RFX5-201ENST00000290524 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
RFX5-201ENST00000290524 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFX5-201ENST00000290524 HMGXB3Q12766 1538 aa12.95□□□□□ -0.34
RFX5-201ENST00000290524 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
RFX5-201ENST00000290524 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
RFX5-201ENST00000290524 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
RFX5-201ENST00000290524 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
RFX5-201ENST00000290524 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
RFX5-201ENST00000290524 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
RFX5-201ENST00000290524 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
RFX5-201ENST00000290524 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
RFX5-201ENST00000290524 TRIM41Q8WV44 630 aa12.77□□□□□ -0.36
RFX5-201ENST00000290524 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
RFX5-201ENST00000290524 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
RFX5-201ENST00000290524 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
RFX5-201ENST00000290524 EEA1Q15075 1411 aa12.68□□□□□ -0.38
RFX5-201ENST00000290524 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
RFX5-201ENST00000290524 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
RFX5-201ENST00000290524 KIF21BO75037 1637 aa12.65□□□□□ -0.38
RFX5-201ENST00000290524 CFTRP13569 1480 aa12.65□□□□□ -0.39
RFX5-201ENST00000290524 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
RFX5-201ENST00000290524 SOGA1O94964 1423 aa12.6□□□□□ -0.39
RFX5-201ENST00000290524 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
RFX5-201ENST00000290524 CUX1P39880 1505 aa12.56□□□□□ -0.4
RFX5-201ENST00000290524 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
RFX5-201ENST00000290524 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
RFX5-201ENST00000290524 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
RFX5-201ENST00000290524 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
RFX5-201ENST00000290524 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
RFX5-201ENST00000290524 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
RFX5-201ENST00000290524 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
RFX5-201ENST00000290524 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
RFX5-201ENST00000290524 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
RFX5-201ENST00000290524 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
RFX5-201ENST00000290524 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
RFX5-201ENST00000290524 NEUROD1Q13562 356 aa12.43□□□□□ -0.42
RFX5-201ENST00000290524 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
RFX5-201ENST00000290524 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
RFX5-201ENST00000290524 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
RFX5-201ENST00000290524 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
RFX5-201ENST00000290524 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
RFX5-201ENST00000290524 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
RFX5-201ENST00000290524 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
RFX5-201ENST00000290524 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
RFX5-201ENST00000290524 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
RFX5-201ENST00000290524 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
RFX5-201ENST00000290524 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
RFX5-201ENST00000290524 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
RFX5-201ENST00000290524 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.44
RFX5-201ENST00000290524 TOPBP1Q92547 1522 aa12.27□□□□□ -0.44
RFX5-201ENST00000290524 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
RFX5-201ENST00000290524 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
RFX5-201ENST00000290524 CUL7Q14999 1698 aa12.25□□□□□ -0.45
RFX5-201ENST00000290524 NESP48681 1621 aa12.25□□□□□ -0.45
RFX5-201ENST00000290524 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
RFX5-201ENST00000290524 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
RFX5-201ENST00000290524 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
RFX5-201ENST00000290524 CLIP1P30622 1438 aa12.23□□□□□ -0.45
RFX5-201ENST00000290524 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
RFX5-201ENST00000290524 CENPBP07199 599 aaPredicted RBP12.21□□□□□ -0.45
RFX5-201ENST00000290524 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
RFX5-201ENST00000290524 CTTNBP2Q8WZ74 1663 aa12.2□□□□□ -0.46
RFX5-201ENST00000290524 IGF1RP08069 1367 aa12.19□□□□□ -0.46
RFX5-201ENST00000290524 CUX2O14529 1486 aa12.19□□□□□ -0.46
RFX5-201ENST00000290524 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
RFX5-201ENST00000290524 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
RFX5-201ENST00000290524 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
RFX5-201ENST00000290524 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
RFX5-201ENST00000290524 CFAP43Q8NDM7 1665 aa12.12□□□□□ -0.47
RFX5-201ENST00000290524 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms