RNA–Protein interactions for RNA: ENST00000290294.4

PRAC1-201, Transcript of PRAC1 small nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAC1, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1-201ENST00000290294 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
PRAC1-201ENST00000290294 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
PRAC1-201ENST00000290294 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
PRAC1-201ENST00000290294 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
PRAC1-201ENST00000290294 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
PRAC1-201ENST00000290294 ABCC9O60706 1549 aa17.76■□□□□ 0.43
PRAC1-201ENST00000290294 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
PRAC1-201ENST00000290294 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
PRAC1-201ENST00000290294 FOXD1Q16676 465 aa17.14■□□□□ 0.33
PRAC1-201ENST00000290294 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
PRAC1-201ENST00000290294 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
PRAC1-201ENST00000290294 NACADO15069 1562 aa16.77■□□□□ 0.28
PRAC1-201ENST00000290294 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
PRAC1-201ENST00000290294 MSH5O43196 834 aa16.62■□□□□ 0.25
PRAC1-201ENST00000290294 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRAC1-201ENST00000290294 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
PRAC1-201ENST00000290294 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
PRAC1-201ENST00000290294 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
PRAC1-201ENST00000290294 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
PRAC1-201ENST00000290294 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
PRAC1-201ENST00000290294 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
PRAC1-201ENST00000290294 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
PRAC1-201ENST00000290294 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
PRAC1-201ENST00000290294 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
PRAC1-201ENST00000290294 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
PRAC1-201ENST00000290294 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
PRAC1-201ENST00000290294 DNAJC5Q9H3Z4 198 aa15.62■□□□□ 0.09
PRAC1-201ENST00000290294 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
PRAC1-201ENST00000290294 CUX2O14529 1486 aa15.44■□□□□ 0.06
PRAC1-201ENST00000290294 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
PRAC1-201ENST00000290294 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
PRAC1-201ENST00000290294 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
PRAC1-201ENST00000290294 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
PRAC1-201ENST00000290294 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
PRAC1-201ENST00000290294 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
PRAC1-201ENST00000290294 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
PRAC1-201ENST00000290294 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
PRAC1-201ENST00000290294 NESP48681 1621 aa15.17■□□□□ 0.02
PRAC1-201ENST00000290294 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
PRAC1-201ENST00000290294 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
PRAC1-201ENST00000290294 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
PRAC1-201ENST00000290294 MROH2BQ7Z745 1585 aa15.06■□□□□ 0
PRAC1-201ENST00000290294 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
PRAC1-201ENST00000290294 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
PRAC1-201ENST00000290294 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
PRAC1-201ENST00000290294 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
PRAC1-201ENST00000290294 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
PRAC1-201ENST00000290294 WIZO95785 1651 aa14.86□□□□□ -0.03
PRAC1-201ENST00000290294 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
PRAC1-201ENST00000290294 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
PRAC1-201ENST00000290294 WDR62O43379 1518 aa14.85□□□□□ -0.03
PRAC1-201ENST00000290294 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
PRAC1-201ENST00000290294 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
PRAC1-201ENST00000290294 CFTRP13569 1480 aa14.79□□□□□ -0.04
PRAC1-201ENST00000290294 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
PRAC1-201ENST00000290294 ADRA2BP18089 450 aa14.74□□□□□ -0.05
PRAC1-201ENST00000290294 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.06
PRAC1-201ENST00000290294 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
PRAC1-201ENST00000290294 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
PRAC1-201ENST00000290294 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
PRAC1-201ENST00000290294 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
PRAC1-201ENST00000290294 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
PRAC1-201ENST00000290294 POTEHQ6S545 545 aa14.49□□□□□ -0.09
PRAC1-201ENST00000290294 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
PRAC1-201ENST00000290294 ZNF608Q9ULD9 1512 aaPredicted RBP14.47□□□□□ -0.09
PRAC1-201ENST00000290294 FBLN2P98095 1184 aa14.44□□□□□ -0.1
PRAC1-201ENST00000290294 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
PRAC1-201ENST00000290294 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
PRAC1-201ENST00000290294 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
PRAC1-201ENST00000290294 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
PRAC1-201ENST00000290294 CYB5RLQ6IPT4 315 aa14.43□□□□□ -0.1
PRAC1-201ENST00000290294 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
PRAC1-201ENST00000290294 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRAC1-201ENST00000290294 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
PRAC1-201ENST00000290294 SOGA1O94964 1423 aa14.36□□□□□ -0.11
PRAC1-201ENST00000290294 TRHP20396 242 aaPredicted RBP14.36□□□□□ -0.11
PRAC1-201ENST00000290294 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
PRAC1-201ENST00000290294 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.11
PRAC1-201ENST00000290294 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
PRAC1-201ENST00000290294 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
PRAC1-201ENST00000290294 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
PRAC1-201ENST00000290294 CHD1O14646 1710 aa14.28□□□□□ -0.12
PRAC1-201ENST00000290294 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.12
PRAC1-201ENST00000290294 MAGI1Q96QZ7 1491 aaPredicted RBP14.23□□□□□ -0.13
PRAC1-201ENST00000290294 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
PRAC1-201ENST00000290294 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
PRAC1-201ENST00000290294 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
PRAC1-201ENST00000290294 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
PRAC1-201ENST00000290294 SYNJ1O43426 1573 aa14.21□□□□□ -0.14
PRAC1-201ENST00000290294 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
PRAC1-201ENST00000290294 CUX1P39880 1505 aa14.15□□□□□ -0.14
PRAC1-201ENST00000290294 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
PRAC1-201ENST00000290294 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
PRAC1-201ENST00000290294 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
PRAC1-201ENST00000290294 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
PRAC1-201ENST00000290294 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
PRAC1-201ENST00000290294 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.15
PRAC1-201ENST00000290294 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
PRAC1-201ENST00000290294 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
PRAC1-201ENST00000290294 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms