RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
XRCC4-201ENST00000282268 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
XRCC4-201ENST00000282268 ABCC9O60706 1549 aa21.94■■□□□ 1.1
XRCC4-201ENST00000282268 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
XRCC4-201ENST00000282268 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
XRCC4-201ENST00000282268 DCAF1Q9Y4B6 1507 aa21.49■■□□□ 1.03
XRCC4-201ENST00000282268 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
XRCC4-201ENST00000282268 NACADO15069 1562 aa21.32■■□□□ 1
XRCC4-201ENST00000282268 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
XRCC4-201ENST00000282268 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
XRCC4-201ENST00000282268 SCRIBQ14160 1630 aa21.09■□□□□ 0.97
XRCC4-201ENST00000282268 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
XRCC4-201ENST00000282268 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
XRCC4-201ENST00000282268 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.88
XRCC4-201ENST00000282268 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
XRCC4-201ENST00000282268 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
XRCC4-201ENST00000282268 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
XRCC4-201ENST00000282268 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
XRCC4-201ENST00000282268 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
XRCC4-201ENST00000282268 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
XRCC4-201ENST00000282268 WIZO95785 1651 aa20.04■□□□□ 0.8
XRCC4-201ENST00000282268 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
XRCC4-201ENST00000282268 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
XRCC4-201ENST00000282268 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
XRCC4-201ENST00000282268 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
XRCC4-201ENST00000282268 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
XRCC4-201ENST00000282268 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.76
XRCC4-201ENST00000282268 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.75
XRCC4-201ENST00000282268 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
XRCC4-201ENST00000282268 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
XRCC4-201ENST00000282268 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
XRCC4-201ENST00000282268 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
XRCC4-201ENST00000282268 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
XRCC4-201ENST00000282268 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
XRCC4-201ENST00000282268 CFTRP13569 1480 aa19.19■□□□□ 0.66
XRCC4-201ENST00000282268 NESP48681 1621 aa19.18■□□□□ 0.66
XRCC4-201ENST00000282268 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
XRCC4-201ENST00000282268 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
XRCC4-201ENST00000282268 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
XRCC4-201ENST00000282268 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
XRCC4-201ENST00000282268 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
XRCC4-201ENST00000282268 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
XRCC4-201ENST00000282268 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
XRCC4-201ENST00000282268 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
XRCC4-201ENST00000282268 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
XRCC4-201ENST00000282268 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
XRCC4-201ENST00000282268 CUX1P39880 1505 aa18.9■□□□□ 0.62
XRCC4-201ENST00000282268 KIF21AQ7Z4S6 1674 aa18.88■□□□□ 0.61
XRCC4-201ENST00000282268 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
XRCC4-201ENST00000282268 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
XRCC4-201ENST00000282268 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.6
XRCC4-201ENST00000282268 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
XRCC4-201ENST00000282268 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
XRCC4-201ENST00000282268 SOGA1O94964 1423 aa18.77■□□□□ 0.6
XRCC4-201ENST00000282268 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
XRCC4-201ENST00000282268 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
XRCC4-201ENST00000282268 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
XRCC4-201ENST00000282268 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
XRCC4-201ENST00000282268 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
XRCC4-201ENST00000282268 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
XRCC4-201ENST00000282268 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
XRCC4-201ENST00000282268 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
XRCC4-201ENST00000282268 CUX2O14529 1486 aa18.61■□□□□ 0.57
XRCC4-201ENST00000282268 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
XRCC4-201ENST00000282268 WDR62O43379 1518 aa18.6■□□□□ 0.57
XRCC4-201ENST00000282268 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
XRCC4-201ENST00000282268 EEA1Q15075 1411 aa18.59■□□□□ 0.57
XRCC4-201ENST00000282268 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
XRCC4-201ENST00000282268 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.56
XRCC4-201ENST00000282268 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
XRCC4-201ENST00000282268 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
XRCC4-201ENST00000282268 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
XRCC4-201ENST00000282268 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
XRCC4-201ENST00000282268 IGF1RP08069 1367 aa18.43■□□□□ 0.54
XRCC4-201ENST00000282268 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
XRCC4-201ENST00000282268 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
XRCC4-201ENST00000282268 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
XRCC4-201ENST00000282268 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
XRCC4-201ENST00000282268 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
XRCC4-201ENST00000282268 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
XRCC4-201ENST00000282268 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
XRCC4-201ENST00000282268 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
XRCC4-201ENST00000282268 KIF21BO75037 1637 aa18.35■□□□□ 0.53
XRCC4-201ENST00000282268 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
XRCC4-201ENST00000282268 EIF4G3O43432 1585 aaKnown RBP18.31■□□□□ 0.52
XRCC4-201ENST00000282268 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
XRCC4-201ENST00000282268 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
XRCC4-201ENST00000282268 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
XRCC4-201ENST00000282268 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
XRCC4-201ENST00000282268 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
XRCC4-201ENST00000282268 CUL7Q14999 1698 aa18.25■□□□□ 0.51
XRCC4-201ENST00000282268 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
XRCC4-201ENST00000282268 FBLN2P98095 1184 aa18.19■□□□□ 0.5
XRCC4-201ENST00000282268 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
XRCC4-201ENST00000282268 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
XRCC4-201ENST00000282268 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
XRCC4-201ENST00000282268 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
XRCC4-201ENST00000282268 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
XRCC4-201ENST00000282268 CLIP1P30622 1438 aa18.1■□□□□ 0.49
XRCC4-201ENST00000282268 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms