RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
LCN2-201ENST00000277480 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
LCN2-201ENST00000277480 ABCC9O60706 1549 aa19.91■□□□□ 0.78
LCN2-201ENST00000277480 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
LCN2-201ENST00000277480 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
LCN2-201ENST00000277480 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
LCN2-201ENST00000277480 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
LCN2-201ENST00000277480 NACADO15069 1562 aa19.4■□□□□ 0.7
LCN2-201ENST00000277480 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
LCN2-201ENST00000277480 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
LCN2-201ENST00000277480 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
LCN2-201ENST00000277480 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
LCN2-201ENST00000277480 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
LCN2-201ENST00000277480 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
LCN2-201ENST00000277480 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
LCN2-201ENST00000277480 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
LCN2-201ENST00000277480 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
LCN2-201ENST00000277480 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
LCN2-201ENST00000277480 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
LCN2-201ENST00000277480 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
LCN2-201ENST00000277480 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
LCN2-201ENST00000277480 WIZO95785 1651 aa18.12■□□□□ 0.49
LCN2-201ENST00000277480 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
LCN2-201ENST00000277480 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
LCN2-201ENST00000277480 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
LCN2-201ENST00000277480 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
LCN2-201ENST00000277480 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
LCN2-201ENST00000277480 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
LCN2-201ENST00000277480 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
LCN2-201ENST00000277480 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
LCN2-201ENST00000277480 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
LCN2-201ENST00000277480 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
LCN2-201ENST00000277480 CFTRP13569 1480 aa17.46■□□□□ 0.39
LCN2-201ENST00000277480 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
LCN2-201ENST00000277480 NESP48681 1621 aa17.41■□□□□ 0.38
LCN2-201ENST00000277480 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
LCN2-201ENST00000277480 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
LCN2-201ENST00000277480 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
LCN2-201ENST00000277480 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
LCN2-201ENST00000277480 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
LCN2-201ENST00000277480 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
LCN2-201ENST00000277480 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
LCN2-201ENST00000277480 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
LCN2-201ENST00000277480 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
LCN2-201ENST00000277480 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
LCN2-201ENST00000277480 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
LCN2-201ENST00000277480 CUX1P39880 1505 aa17.14■□□□□ 0.33
LCN2-201ENST00000277480 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
LCN2-201ENST00000277480 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
LCN2-201ENST00000277480 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
LCN2-201ENST00000277480 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
LCN2-201ENST00000277480 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
LCN2-201ENST00000277480 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
LCN2-201ENST00000277480 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
LCN2-201ENST00000277480 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
LCN2-201ENST00000277480 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
LCN2-201ENST00000277480 WDR62O43379 1518 aa16.96■□□□□ 0.31
LCN2-201ENST00000277480 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
LCN2-201ENST00000277480 SOGA1O94964 1423 aa16.92■□□□□ 0.3
LCN2-201ENST00000277480 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
LCN2-201ENST00000277480 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
LCN2-201ENST00000277480 CUX2O14529 1486 aa16.86■□□□□ 0.29
LCN2-201ENST00000277480 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
LCN2-201ENST00000277480 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
LCN2-201ENST00000277480 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
LCN2-201ENST00000277480 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
LCN2-201ENST00000277480 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
LCN2-201ENST00000277480 EEA1Q15075 1411 aa16.77■□□□□ 0.27
LCN2-201ENST00000277480 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
LCN2-201ENST00000277480 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
LCN2-201ENST00000277480 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LCN2-201ENST00000277480 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
LCN2-201ENST00000277480 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
LCN2-201ENST00000277480 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
LCN2-201ENST00000277480 IGF1RP08069 1367 aa16.69■□□□□ 0.26
LCN2-201ENST00000277480 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
LCN2-201ENST00000277480 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
LCN2-201ENST00000277480 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
LCN2-201ENST00000277480 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
LCN2-201ENST00000277480 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
LCN2-201ENST00000277480 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
LCN2-201ENST00000277480 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
LCN2-201ENST00000277480 KIF21BO75037 1637 aa16.59■□□□□ 0.25
LCN2-201ENST00000277480 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.24
LCN2-201ENST00000277480 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
LCN2-201ENST00000277480 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
LCN2-201ENST00000277480 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
LCN2-201ENST00000277480 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
LCN2-201ENST00000277480 CUL7Q14999 1698 aa16.53■□□□□ 0.24
LCN2-201ENST00000277480 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
LCN2-201ENST00000277480 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
LCN2-201ENST00000277480 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
LCN2-201ENST00000277480 UBTFP17480 764 aaKnown RBP16.45■□□□□ 0.22
LCN2-201ENST00000277480 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
LCN2-201ENST00000277480 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
LCN2-201ENST00000277480 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
LCN2-201ENST00000277480 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
LCN2-201ENST00000277480 FBLN2P98095 1184 aa16.34■□□□□ 0.21
LCN2-201ENST00000277480 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
LCN2-201ENST00000277480 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms