RNA–Protein interactions for RNA: ENST00000274456.6

TNFAIP8-201, Transcript of TNF alpha induced protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP8, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-201ENST00000274456 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
TNFAIP8-201ENST00000274456 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
TNFAIP8-201ENST00000274456 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
TNFAIP8-201ENST00000274456 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
TNFAIP8-201ENST00000274456 ABCC9O60706 1549 aa18.67■□□□□ 0.58
TNFAIP8-201ENST00000274456 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
TNFAIP8-201ENST00000274456 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
TNFAIP8-201ENST00000274456 NACADO15069 1562 aa18.11■□□□□ 0.49
TNFAIP8-201ENST00000274456 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
TNFAIP8-201ENST00000274456 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
TNFAIP8-201ENST00000274456 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
TNFAIP8-201ENST00000274456 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
TNFAIP8-201ENST00000274456 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
TNFAIP8-201ENST00000274456 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
TNFAIP8-201ENST00000274456 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
TNFAIP8-201ENST00000274456 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
TNFAIP8-201ENST00000274456 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
TNFAIP8-201ENST00000274456 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
TNFAIP8-201ENST00000274456 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
TNFAIP8-201ENST00000274456 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
TNFAIP8-201ENST00000274456 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
TNFAIP8-201ENST00000274456 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
TNFAIP8-201ENST00000274456 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
TNFAIP8-201ENST00000274456 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
TNFAIP8-201ENST00000274456 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
TNFAIP8-201ENST00000274456 FOXD1Q16676 465 aa16.83■□□□□ 0.28
TNFAIP8-201ENST00000274456 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.28
TNFAIP8-201ENST00000274456 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
TNFAIP8-201ENST00000274456 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
TNFAIP8-201ENST00000274456 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
TNFAIP8-201ENST00000274456 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
TNFAIP8-201ENST00000274456 WIZO95785 1651 aa16.66■□□□□ 0.26
TNFAIP8-201ENST00000274456 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TNFAIP8-201ENST00000274456 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
TNFAIP8-201ENST00000274456 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
TNFAIP8-201ENST00000274456 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
TNFAIP8-201ENST00000274456 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
TNFAIP8-201ENST00000274456 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
TNFAIP8-201ENST00000274456 NESP48681 1621 aa16.24■□□□□ 0.19
TNFAIP8-201ENST00000274456 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
TNFAIP8-201ENST00000274456 CFTRP13569 1480 aa16.2■□□□□ 0.18
TNFAIP8-201ENST00000274456 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
TNFAIP8-201ENST00000274456 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
TNFAIP8-201ENST00000274456 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
TNFAIP8-201ENST00000274456 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
TNFAIP8-201ENST00000274456 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
TNFAIP8-201ENST00000274456 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
TNFAIP8-201ENST00000274456 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
TNFAIP8-201ENST00000274456 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
TNFAIP8-201ENST00000274456 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
TNFAIP8-201ENST00000274456 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
TNFAIP8-201ENST00000274456 WDR62O43379 1518 aa15.86■□□□□ 0.13
TNFAIP8-201ENST00000274456 ABCC8Q09428 1581 aa15.83■□□□□ 0.12
TNFAIP8-201ENST00000274456 CUX2O14529 1486 aa15.82■□□□□ 0.12
TNFAIP8-201ENST00000274456 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
TNFAIP8-201ENST00000274456 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
TNFAIP8-201ENST00000274456 CUX1P39880 1505 aa15.78■□□□□ 0.12
TNFAIP8-201ENST00000274456 MSH5O43196 834 aa15.77■□□□□ 0.12
TNFAIP8-201ENST00000274456 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
TNFAIP8-201ENST00000274456 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
TNFAIP8-201ENST00000274456 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
TNFAIP8-201ENST00000274456 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
TNFAIP8-201ENST00000274456 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
TNFAIP8-201ENST00000274456 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
TNFAIP8-201ENST00000274456 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
TNFAIP8-201ENST00000274456 SOGA1O94964 1423 aa15.65■□□□□ 0.1
TNFAIP8-201ENST00000274456 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
TNFAIP8-201ENST00000274456 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
TNFAIP8-201ENST00000274456 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
TNFAIP8-201ENST00000274456 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
TNFAIP8-201ENST00000274456 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
TNFAIP8-201ENST00000274456 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
TNFAIP8-201ENST00000274456 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
TNFAIP8-201ENST00000274456 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
TNFAIP8-201ENST00000274456 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
TNFAIP8-201ENST00000274456 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
TNFAIP8-201ENST00000274456 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
TNFAIP8-201ENST00000274456 ADRA2BP18089 450 aa15.5■□□□□ 0.07
TNFAIP8-201ENST00000274456 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
TNFAIP8-201ENST00000274456 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
TNFAIP8-201ENST00000274456 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
TNFAIP8-201ENST00000274456 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
TNFAIP8-201ENST00000274456 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
TNFAIP8-201ENST00000274456 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
TNFAIP8-201ENST00000274456 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
TNFAIP8-201ENST00000274456 IGF1RP08069 1367 aa15.37■□□□□ 0.05
TNFAIP8-201ENST00000274456 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
TNFAIP8-201ENST00000274456 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
TNFAIP8-201ENST00000274456 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
TNFAIP8-201ENST00000274456 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
TNFAIP8-201ENST00000274456 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
TNFAIP8-201ENST00000274456 EEA1Q15075 1411 aa15.28■□□□□ 0.04
TNFAIP8-201ENST00000274456 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
TNFAIP8-201ENST00000274456 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
TNFAIP8-201ENST00000274456 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
TNFAIP8-201ENST00000274456 FBLN2P98095 1184 aa15.26■□□□□ 0.03
TNFAIP8-201ENST00000274456 CUL7Q14999 1698 aa15.25■□□□□ 0.03
TNFAIP8-201ENST00000274456 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
TNFAIP8-201ENST00000274456 CHD1O14646 1710 aa15.24■□□□□ 0.03
TNFAIP8-201ENST00000274456 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms