RNA–Protein interactions for RNA: ENST00000271651.7

CTSK-201, Transcript of cathepsin K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSK, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSK-201ENST00000271651 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
CTSK-201ENST00000271651 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
CTSK-201ENST00000271651 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
CTSK-201ENST00000271651 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
CTSK-201ENST00000271651 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
CTSK-201ENST00000271651 SHROOM4Q9ULL8 1493 aa21.75■■□□□ 1.07
CTSK-201ENST00000271651 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
CTSK-201ENST00000271651 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
CTSK-201ENST00000271651 ABCC9O60706 1549 aa21.69■■□□□ 1.06
CTSK-201ENST00000271651 NACADO15069 1562 aa21.54■■□□□ 1.04
CTSK-201ENST00000271651 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
CTSK-201ENST00000271651 SCRIBQ14160 1630 aa21.27■■□□□ 1
CTSK-201ENST00000271651 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
CTSK-201ENST00000271651 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
CTSK-201ENST00000271651 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
CTSK-201ENST00000271651 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
CTSK-201ENST00000271651 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.89
CTSK-201ENST00000271651 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
CTSK-201ENST00000271651 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
CTSK-201ENST00000271651 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
CTSK-201ENST00000271651 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
CTSK-201ENST00000271651 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
CTSK-201ENST00000271651 WIZO95785 1651 aa20.36■□□□□ 0.85
CTSK-201ENST00000271651 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
CTSK-201ENST00000271651 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
CTSK-201ENST00000271651 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
CTSK-201ENST00000271651 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
CTSK-201ENST00000271651 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
CTSK-201ENST00000271651 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
CTSK-201ENST00000271651 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
CTSK-201ENST00000271651 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
CTSK-201ENST00000271651 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
CTSK-201ENST00000271651 TRIM41Q8WV44 630 aa19.83■□□□□ 0.76
CTSK-201ENST00000271651 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
CTSK-201ENST00000271651 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
CTSK-201ENST00000271651 HRCP23327 699 aa19.5■□□□□ 0.71
CTSK-201ENST00000271651 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
CTSK-201ENST00000271651 CFTRP13569 1480 aa19.44■□□□□ 0.7
CTSK-201ENST00000271651 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
CTSK-201ENST00000271651 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
CTSK-201ENST00000271651 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
CTSK-201ENST00000271651 EEA1Q15075 1411 aa19.36■□□□□ 0.69
CTSK-201ENST00000271651 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
CTSK-201ENST00000271651 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
CTSK-201ENST00000271651 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
CTSK-201ENST00000271651 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
CTSK-201ENST00000271651 SOGA1O94964 1423 aa19.24■□□□□ 0.67
CTSK-201ENST00000271651 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
CTSK-201ENST00000271651 CUX1P39880 1505 aa19.18■□□□□ 0.66
CTSK-201ENST00000271651 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
CTSK-201ENST00000271651 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
CTSK-201ENST00000271651 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
CTSK-201ENST00000271651 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
CTSK-201ENST00000271651 NESP48681 1621 aa19.06■□□□□ 0.64
CTSK-201ENST00000271651 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
CTSK-201ENST00000271651 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
CTSK-201ENST00000271651 KIF21BO75037 1637 aa19.05■□□□□ 0.64
CTSK-201ENST00000271651 PDS5BQ9NTI5 1447 aa19.04■□□□□ 0.64
CTSK-201ENST00000271651 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
CTSK-201ENST00000271651 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
CTSK-201ENST00000271651 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
CTSK-201ENST00000271651 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
CTSK-201ENST00000271651 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
CTSK-201ENST00000271651 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
CTSK-201ENST00000271651 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
CTSK-201ENST00000271651 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
CTSK-201ENST00000271651 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
CTSK-201ENST00000271651 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
CTSK-201ENST00000271651 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
CTSK-201ENST00000271651 CUX2O14529 1486 aa18.89■□□□□ 0.61
CTSK-201ENST00000271651 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
CTSK-201ENST00000271651 KIF21AQ7Z4S6 1674 aa18.87■□□□□ 0.61
CTSK-201ENST00000271651 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
CTSK-201ENST00000271651 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
CTSK-201ENST00000271651 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
CTSK-201ENST00000271651 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
CTSK-201ENST00000271651 IGF1RP08069 1367 aa18.78■□□□□ 0.6
CTSK-201ENST00000271651 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
CTSK-201ENST00000271651 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
CTSK-201ENST00000271651 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
CTSK-201ENST00000271651 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
CTSK-201ENST00000271651 CLIP1P30622 1438 aa18.74■□□□□ 0.59
CTSK-201ENST00000271651 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
CTSK-201ENST00000271651 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
CTSK-201ENST00000271651 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
CTSK-201ENST00000271651 CUL7Q14999 1698 aa18.67■□□□□ 0.58
CTSK-201ENST00000271651 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
CTSK-201ENST00000271651 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
CTSK-201ENST00000271651 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
CTSK-201ENST00000271651 WDR62O43379 1518 aa18.63■□□□□ 0.57
CTSK-201ENST00000271651 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
CTSK-201ENST00000271651 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
CTSK-201ENST00000271651 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
CTSK-201ENST00000271651 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
CTSK-201ENST00000271651 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
CTSK-201ENST00000271651 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
CTSK-201ENST00000271651 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
CTSK-201ENST00000271651 APLP2Q06481 763 aa18.5■□□□□ 0.55
CTSK-201ENST00000271651 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
CTSK-201ENST00000271651 PBRM1Q86U86 1689 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms