RNA–Protein interactions for RNA: ENST00000263864.9

VAMP8-201, Transcript of vesicle associated membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP8, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-201ENST00000263864 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
VAMP8-201ENST00000263864 ABCC9O60706 1549 aa25.47■■□□□ 1.67
VAMP8-201ENST00000263864 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
VAMP8-201ENST00000263864 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
VAMP8-201ENST00000263864 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
VAMP8-201ENST00000263864 NACADO15069 1562 aa23.65■■□□□ 1.38
VAMP8-201ENST00000263864 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
VAMP8-201ENST00000263864 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
VAMP8-201ENST00000263864 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
VAMP8-201ENST00000263864 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
VAMP8-201ENST00000263864 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
VAMP8-201ENST00000263864 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
VAMP8-201ENST00000263864 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
VAMP8-201ENST00000263864 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
VAMP8-201ENST00000263864 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
VAMP8-201ENST00000263864 DNAJC5Q9H3Z4 198 aa22.75■■□□□ 1.23
VAMP8-201ENST00000263864 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
VAMP8-201ENST00000263864 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
VAMP8-201ENST00000263864 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
VAMP8-201ENST00000263864 CUX2O14529 1486 aa22.11■■□□□ 1.13
VAMP8-201ENST00000263864 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
VAMP8-201ENST00000263864 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
VAMP8-201ENST00000263864 NESP48681 1621 aa21.76■■□□□ 1.07
VAMP8-201ENST00000263864 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
VAMP8-201ENST00000263864 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
VAMP8-201ENST00000263864 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
VAMP8-201ENST00000263864 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
VAMP8-201ENST00000263864 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
VAMP8-201ENST00000263864 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
VAMP8-201ENST00000263864 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
VAMP8-201ENST00000263864 KIF21AQ7Z4S6 1674 aa21.45■■□□□ 1.02
VAMP8-201ENST00000263864 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
VAMP8-201ENST00000263864 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
VAMP8-201ENST00000263864 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
VAMP8-201ENST00000263864 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
VAMP8-201ENST00000263864 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
VAMP8-201ENST00000263864 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
VAMP8-201ENST00000263864 WDR62O43379 1518 aa21.18■□□□□ 0.98
VAMP8-201ENST00000263864 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
VAMP8-201ENST00000263864 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
VAMP8-201ENST00000263864 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
VAMP8-201ENST00000263864 WIZO95785 1651 aa20.96■□□□□ 0.95
VAMP8-201ENST00000263864 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
VAMP8-201ENST00000263864 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
VAMP8-201ENST00000263864 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
VAMP8-201ENST00000263864 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
VAMP8-201ENST00000263864 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
VAMP8-201ENST00000263864 CFTRP13569 1480 aa20.82■□□□□ 0.92
VAMP8-201ENST00000263864 ARHGEF11O15085 1522 aa20.72■□□□□ 0.91
VAMP8-201ENST00000263864 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
VAMP8-201ENST00000263864 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
VAMP8-201ENST00000263864 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
VAMP8-201ENST00000263864 IFT140Q96RY7 1462 aa20.59■□□□□ 0.89
VAMP8-201ENST00000263864 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
VAMP8-201ENST00000263864 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
VAMP8-201ENST00000263864 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
VAMP8-201ENST00000263864 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
VAMP8-201ENST00000263864 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
VAMP8-201ENST00000263864 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
VAMP8-201ENST00000263864 CHD1O14646 1710 aa20.49■□□□□ 0.87
VAMP8-201ENST00000263864 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.86
VAMP8-201ENST00000263864 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
VAMP8-201ENST00000263864 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
VAMP8-201ENST00000263864 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
VAMP8-201ENST00000263864 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
VAMP8-201ENST00000263864 FBLN2P98095 1184 aa20.33■□□□□ 0.85
VAMP8-201ENST00000263864 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
VAMP8-201ENST00000263864 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
VAMP8-201ENST00000263864 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
VAMP8-201ENST00000263864 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
VAMP8-201ENST00000263864 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
VAMP8-201ENST00000263864 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
VAMP8-201ENST00000263864 SOGA1O94964 1423 aa20.12■□□□□ 0.81
VAMP8-201ENST00000263864 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
VAMP8-201ENST00000263864 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
VAMP8-201ENST00000263864 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
VAMP8-201ENST00000263864 MAGI1Q96QZ7 1491 aaPredicted RBP20.05■□□□□ 0.8
VAMP8-201ENST00000263864 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
VAMP8-201ENST00000263864 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
VAMP8-201ENST00000263864 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
VAMP8-201ENST00000263864 SYNJ2O15056 1496 aa20■□□□□ 0.79
VAMP8-201ENST00000263864 CUX1P39880 1505 aa19.97■□□□□ 0.79
VAMP8-201ENST00000263864 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
VAMP8-201ENST00000263864 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
VAMP8-201ENST00000263864 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
VAMP8-201ENST00000263864 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
VAMP8-201ENST00000263864 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
VAMP8-201ENST00000263864 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
VAMP8-201ENST00000263864 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
VAMP8-201ENST00000263864 NUP160Q12769 1436 aa19.73■□□□□ 0.75
VAMP8-201ENST00000263864 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
VAMP8-201ENST00000263864 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
VAMP8-201ENST00000263864 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
VAMP8-201ENST00000263864 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.72
VAMP8-201ENST00000263864 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
VAMP8-201ENST00000263864 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
VAMP8-201ENST00000263864 KDM4FA0A1W2PPD8 638 aa19.56■□□□□ 0.72
VAMP8-201ENST00000263864 FAM69CQ0P6D2 419 aa19.55■□□□□ 0.72
VAMP8-201ENST00000263864 DIP2BQ9P265 1576 aa19.52■□□□□ 0.71
VAMP8-201ENST00000263864 ILDR1Q86SU0 546 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms