RNA–Protein interactions for RNA: ENST00000263671.9

CHRDL2-201, Transcript of chordin like 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-201ENST00000263671 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
CHRDL2-201ENST00000263671 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
CHRDL2-201ENST00000263671 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
CHRDL2-201ENST00000263671 ABCC9O60706 1549 aa24.74■■□□□ 1.55
CHRDL2-201ENST00000263671 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.52
CHRDL2-201ENST00000263671 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
CHRDL2-201ENST00000263671 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
CHRDL2-201ENST00000263671 NACADO15069 1562 aa24.25■■□□□ 1.47
CHRDL2-201ENST00000263671 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
CHRDL2-201ENST00000263671 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
CHRDL2-201ENST00000263671 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
CHRDL2-201ENST00000263671 UNC13AQ9UPW8 1703 aa23.69■■□□□ 1.38
CHRDL2-201ENST00000263671 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
CHRDL2-201ENST00000263671 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHRDL2-201ENST00000263671 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
CHRDL2-201ENST00000263671 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.28
CHRDL2-201ENST00000263671 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
CHRDL2-201ENST00000263671 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
CHRDL2-201ENST00000263671 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
CHRDL2-201ENST00000263671 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
CHRDL2-201ENST00000263671 WIZO95785 1651 aa22.8■■□□□ 1.24
CHRDL2-201ENST00000263671 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
CHRDL2-201ENST00000263671 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
CHRDL2-201ENST00000263671 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
CHRDL2-201ENST00000263671 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
CHRDL2-201ENST00000263671 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
CHRDL2-201ENST00000263671 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
CHRDL2-201ENST00000263671 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
CHRDL2-201ENST00000263671 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
CHRDL2-201ENST00000263671 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
CHRDL2-201ENST00000263671 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
CHRDL2-201ENST00000263671 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
CHRDL2-201ENST00000263671 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
CHRDL2-201ENST00000263671 CFTRP13569 1480 aa21.84■■□□□ 1.09
CHRDL2-201ENST00000263671 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
CHRDL2-201ENST00000263671 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
CHRDL2-201ENST00000263671 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
CHRDL2-201ENST00000263671 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
CHRDL2-201ENST00000263671 NESP48681 1621 aa21.68■■□□□ 1.06
CHRDL2-201ENST00000263671 LAMC3Q9Y6N6 1575 aa21.67■■□□□ 1.06
CHRDL2-201ENST00000263671 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.05
CHRDL2-201ENST00000263671 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
CHRDL2-201ENST00000263671 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
CHRDL2-201ENST00000263671 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
CHRDL2-201ENST00000263671 TOP2BQ02880 1626 aa21.52■■□□□ 1.03
CHRDL2-201ENST00000263671 CUX1P39880 1505 aa21.51■■□□□ 1.03
CHRDL2-201ENST00000263671 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
CHRDL2-201ENST00000263671 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
CHRDL2-201ENST00000263671 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
CHRDL2-201ENST00000263671 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
CHRDL2-201ENST00000263671 SOGA1O94964 1423 aa21.32■■□□□ 1
CHRDL2-201ENST00000263671 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
CHRDL2-201ENST00000263671 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
CHRDL2-201ENST00000263671 TOPBP1Q92547 1522 aa21.31■■□□□ 1
CHRDL2-201ENST00000263671 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
CHRDL2-201ENST00000263671 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
CHRDL2-201ENST00000263671 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
CHRDL2-201ENST00000263671 EEA1Q15075 1411 aa21.22■□□□□ 0.99
CHRDL2-201ENST00000263671 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
CHRDL2-201ENST00000263671 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
CHRDL2-201ENST00000263671 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
CHRDL2-201ENST00000263671 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
CHRDL2-201ENST00000263671 WDR62O43379 1518 aa21.14■□□□□ 0.97
CHRDL2-201ENST00000263671 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
CHRDL2-201ENST00000263671 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
CHRDL2-201ENST00000263671 CUX2O14529 1486 aa21.09■□□□□ 0.97
CHRDL2-201ENST00000263671 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
CHRDL2-201ENST00000263671 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
CHRDL2-201ENST00000263671 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
CHRDL2-201ENST00000263671 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
CHRDL2-201ENST00000263671 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
CHRDL2-201ENST00000263671 KIF21BO75037 1637 aa21.01■□□□□ 0.95
CHRDL2-201ENST00000263671 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
CHRDL2-201ENST00000263671 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
CHRDL2-201ENST00000263671 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
CHRDL2-201ENST00000263671 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
CHRDL2-201ENST00000263671 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
CHRDL2-201ENST00000263671 IGF1RP08069 1367 aa20.9■□□□□ 0.94
CHRDL2-201ENST00000263671 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
CHRDL2-201ENST00000263671 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
CHRDL2-201ENST00000263671 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
CHRDL2-201ENST00000263671 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
CHRDL2-201ENST00000263671 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
CHRDL2-201ENST00000263671 CUL7Q14999 1698 aa20.83■□□□□ 0.92
CHRDL2-201ENST00000263671 AQRO60306 1485 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHRDL2-201ENST00000263671 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
CHRDL2-201ENST00000263671 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
CHRDL2-201ENST00000263671 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
CHRDL2-201ENST00000263671 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
CHRDL2-201ENST00000263671 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
CHRDL2-201ENST00000263671 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
CHRDL2-201ENST00000263671 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
CHRDL2-201ENST00000263671 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
CHRDL2-201ENST00000263671 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
CHRDL2-201ENST00000263671 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
CHRDL2-201ENST00000263671 CLIP1P30622 1438 aa20.59■□□□□ 0.89
CHRDL2-201ENST00000263671 MAGI1Q96QZ7 1491 aaPredicted RBP20.59■□□□□ 0.89
CHRDL2-201ENST00000263671 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
CHRDL2-201ENST00000263671 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
CHRDL2-201ENST00000263671 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms