RNA–Protein interactions for RNA: ENST00000262640.11_PAR_Y

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640_PAR_Y NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
VAMP7-201ENST00000262640_PAR_Y CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
VAMP7-201ENST00000262640_PAR_Y ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
VAMP7-201ENST00000262640_PAR_Y ABCC9O60706 1549 aa24.64■■□□□ 1.54
VAMP7-201ENST00000262640_PAR_Y DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
VAMP7-201ENST00000262640_PAR_Y DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
VAMP7-201ENST00000262640_PAR_Y MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
VAMP7-201ENST00000262640_PAR_Y NACADO15069 1562 aa24.26■■□□□ 1.47
VAMP7-201ENST00000262640_PAR_Y SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
VAMP7-201ENST00000262640_PAR_Y RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
VAMP7-201ENST00000262640_PAR_Y SCRIBQ14160 1630 aa23.86■■□□□ 1.41
VAMP7-201ENST00000262640_PAR_Y UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
VAMP7-201ENST00000262640_PAR_Y BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
VAMP7-201ENST00000262640_PAR_Y PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
VAMP7-201ENST00000262640_PAR_Y SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
VAMP7-201ENST00000262640_PAR_Y CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
VAMP7-201ENST00000262640_PAR_Y RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
VAMP7-201ENST00000262640_PAR_Y BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
VAMP7-201ENST00000262640_PAR_Y MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
VAMP7-201ENST00000262640_PAR_Y SMARCA4P51532 1647 aa22.89■■□□□ 1.25
VAMP7-201ENST00000262640_PAR_Y WIZO95785 1651 aa22.74■■□□□ 1.23
VAMP7-201ENST00000262640_PAR_Y PEG3Q9GZU2 1588 aa22.64■■□□□ 1.21
VAMP7-201ENST00000262640_PAR_Y EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
VAMP7-201ENST00000262640_PAR_Y TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
VAMP7-201ENST00000262640_PAR_Y SMARCA2P51531 1590 aa22.55■■□□□ 1.2
VAMP7-201ENST00000262640_PAR_Y ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
VAMP7-201ENST00000262640_PAR_Y BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
VAMP7-201ENST00000262640_PAR_Y NCAPD3P42695 1498 aa22.39■■□□□ 1.17
VAMP7-201ENST00000262640_PAR_Y HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
VAMP7-201ENST00000262640_PAR_Y CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
VAMP7-201ENST00000262640_PAR_Y CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
VAMP7-201ENST00000262640_PAR_Y CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
VAMP7-201ENST00000262640_PAR_Y CFTRP13569 1480 aa21.85■■□□□ 1.09
VAMP7-201ENST00000262640_PAR_Y TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
VAMP7-201ENST00000262640_PAR_Y DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
VAMP7-201ENST00000262640_PAR_Y CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
VAMP7-201ENST00000262640_PAR_Y ABCC8Q09428 1581 aa21.76■■□□□ 1.07
VAMP7-201ENST00000262640_PAR_Y PRDM2Q13029 1718 aa21.71■■□□□ 1.07
VAMP7-201ENST00000262640_PAR_Y WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
VAMP7-201ENST00000262640_PAR_Y LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
VAMP7-201ENST00000262640_PAR_Y NESP48681 1621 aa21.59■■□□□ 1.05
VAMP7-201ENST00000262640_PAR_Y SYNJ1O43426 1573 aa21.57■■□□□ 1.04
VAMP7-201ENST00000262640_PAR_Y FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
VAMP7-201ENST00000262640_PAR_Y TOP2BQ02880 1626 aa21.52■■□□□ 1.04
VAMP7-201ENST00000262640_PAR_Y BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
VAMP7-201ENST00000262640_PAR_Y PDS5BQ9NTI5 1447 aa21.48■■□□□ 1.03
VAMP7-201ENST00000262640_PAR_Y CUX1P39880 1505 aa21.48■■□□□ 1.03
VAMP7-201ENST00000262640_PAR_Y CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
VAMP7-201ENST00000262640_PAR_Y FAM9AQ8IZU1 332 aaPredicted RBP21.37■■□□□ 1.01
VAMP7-201ENST00000262640_PAR_Y EEA1Q15075 1411 aa21.35■■□□□ 1.01
VAMP7-201ENST00000262640_PAR_Y SOGA1O94964 1423 aa21.35■■□□□ 1.01
VAMP7-201ENST00000262640_PAR_Y DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
VAMP7-201ENST00000262640_PAR_Y KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1.01
VAMP7-201ENST00000262640_PAR_Y TOPBP1Q92547 1522 aa21.3■■□□□ 1
VAMP7-201ENST00000262640_PAR_Y URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
VAMP7-201ENST00000262640_PAR_Y FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
VAMP7-201ENST00000262640_PAR_Y RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
VAMP7-201ENST00000262640_PAR_Y LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
VAMP7-201ENST00000262640_PAR_Y MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
VAMP7-201ENST00000262640_PAR_Y CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
VAMP7-201ENST00000262640_PAR_Y POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
VAMP7-201ENST00000262640_PAR_Y ERCC6Q03468 1493 aa21.17■□□□□ 0.98
VAMP7-201ENST00000262640_PAR_Y KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
VAMP7-201ENST00000262640_PAR_Y CUX2O14529 1486 aa21.11■□□□□ 0.97
VAMP7-201ENST00000262640_PAR_Y ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
VAMP7-201ENST00000262640_PAR_Y WDR62O43379 1518 aa21.1■□□□□ 0.97
VAMP7-201ENST00000262640_PAR_Y RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
VAMP7-201ENST00000262640_PAR_Y KIF21BO75037 1637 aa21.05■□□□□ 0.96
VAMP7-201ENST00000262640_PAR_Y THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
VAMP7-201ENST00000262640_PAR_Y EHMT2Q96KQ7 1210 aa21.03■□□□□ 0.96
VAMP7-201ENST00000262640_PAR_Y GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
VAMP7-201ENST00000262640_PAR_Y WDR97A6NE52 1622 aa21.01■□□□□ 0.95
VAMP7-201ENST00000262640_PAR_Y PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
VAMP7-201ENST00000262640_PAR_Y TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
VAMP7-201ENST00000262640_PAR_Y IGF1RP08069 1367 aa20.97■□□□□ 0.95
VAMP7-201ENST00000262640_PAR_Y ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
VAMP7-201ENST00000262640_PAR_Y GAPVD1Q14C86 1478 aa20.89■□□□□ 0.93
VAMP7-201ENST00000262640_PAR_Y CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
VAMP7-201ENST00000262640_PAR_Y CUL7Q14999 1698 aa20.83■□□□□ 0.93
VAMP7-201ENST00000262640_PAR_Y CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
VAMP7-201ENST00000262640_PAR_Y AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
VAMP7-201ENST00000262640_PAR_Y ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
VAMP7-201ENST00000262640_PAR_Y GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
VAMP7-201ENST00000262640_PAR_Y PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
VAMP7-201ENST00000262640_PAR_Y EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
VAMP7-201ENST00000262640_PAR_Y FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
VAMP7-201ENST00000262640_PAR_Y CLIP1P30622 1438 aa20.68■□□□□ 0.9
VAMP7-201ENST00000262640_PAR_Y ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
VAMP7-201ENST00000262640_PAR_Y SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
VAMP7-201ENST00000262640_PAR_Y MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
VAMP7-201ENST00000262640_PAR_Y CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
VAMP7-201ENST00000262640_PAR_Y RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
VAMP7-201ENST00000262640_PAR_Y SYNJ2O15056 1496 aa20.52■□□□□ 0.87
VAMP7-201ENST00000262640_PAR_Y GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms