RNA–Protein interactions for RNA: ENST00000261834.9

ATG2B-201, Transcript of autophagy related 2B, humanhuman

TSL 2

Gene ATG2B, Length 1,920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-201ENST00000261834 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
ATG2B-201ENST00000261834 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
ATG2B-201ENST00000261834 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
ATG2B-201ENST00000261834 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.05
ATG2B-201ENST00000261834 ABCC9O60706 1549 aa15.3■□□□□ 0.04
ATG2B-201ENST00000261834 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
ATG2B-201ENST00000261834 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
ATG2B-201ENST00000261834 NACADO15069 1562 aa15.08■□□□□ 0.01
ATG2B-201ENST00000261834 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
ATG2B-201ENST00000261834 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
ATG2B-201ENST00000261834 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
ATG2B-201ENST00000261834 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
ATG2B-201ENST00000261834 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
ATG2B-201ENST00000261834 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
ATG2B-201ENST00000261834 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG2B-201ENST00000261834 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
ATG2B-201ENST00000261834 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
ATG2B-201ENST00000261834 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
ATG2B-201ENST00000261834 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
ATG2B-201ENST00000261834 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
ATG2B-201ENST00000261834 WIZO95785 1651 aa14.19□□□□□ -0.14
ATG2B-201ENST00000261834 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
ATG2B-201ENST00000261834 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
ATG2B-201ENST00000261834 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
ATG2B-201ENST00000261834 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
ATG2B-201ENST00000261834 ATAD2BQ9ULI0 1458 aa14.02□□□□□ -0.17
ATG2B-201ENST00000261834 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
ATG2B-201ENST00000261834 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
ATG2B-201ENST00000261834 NCAPD3P42695 1498 aa13.9□□□□□ -0.19
ATG2B-201ENST00000261834 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
ATG2B-201ENST00000261834 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
ATG2B-201ENST00000261834 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
ATG2B-201ENST00000261834 HRCP23327 699 aa13.78□□□□□ -0.2
ATG2B-201ENST00000261834 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
ATG2B-201ENST00000261834 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
ATG2B-201ENST00000261834 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
ATG2B-201ENST00000261834 CFTRP13569 1480 aa13.59□□□□□ -0.23
ATG2B-201ENST00000261834 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
ATG2B-201ENST00000261834 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
ATG2B-201ENST00000261834 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
ATG2B-201ENST00000261834 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
ATG2B-201ENST00000261834 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
ATG2B-201ENST00000261834 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
ATG2B-201ENST00000261834 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
ATG2B-201ENST00000261834 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
ATG2B-201ENST00000261834 NESP48681 1621 aa13.41□□□□□ -0.26
ATG2B-201ENST00000261834 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
ATG2B-201ENST00000261834 CUX1P39880 1505 aa13.38□□□□□ -0.27
ATG2B-201ENST00000261834 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
ATG2B-201ENST00000261834 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
ATG2B-201ENST00000261834 EEA1Q15075 1411 aa13.35□□□□□ -0.27
ATG2B-201ENST00000261834 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
ATG2B-201ENST00000261834 SOGA1O94964 1423 aa13.32□□□□□ -0.28
ATG2B-201ENST00000261834 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
ATG2B-201ENST00000261834 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
ATG2B-201ENST00000261834 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
ATG2B-201ENST00000261834 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
ATG2B-201ENST00000261834 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
ATG2B-201ENST00000261834 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
ATG2B-201ENST00000261834 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
ATG2B-201ENST00000261834 MYT1Q01538 1121 aa13.24□□□□□ -0.29
ATG2B-201ENST00000261834 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
ATG2B-201ENST00000261834 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
ATG2B-201ENST00000261834 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
ATG2B-201ENST00000261834 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
ATG2B-201ENST00000261834 PPARGC1BQ86YN6 1023 aaKnown RBP13.18□□□□□ -0.3
ATG2B-201ENST00000261834 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
ATG2B-201ENST00000261834 MRC2Q9UBG0 1479 aa13.17□□□□□ -0.3
ATG2B-201ENST00000261834 KIF21BO75037 1637 aa13.17□□□□□ -0.3
ATG2B-201ENST00000261834 CUX2O14529 1486 aa13.16□□□□□ -0.3
ATG2B-201ENST00000261834 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
ATG2B-201ENST00000261834 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
ATG2B-201ENST00000261834 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
ATG2B-201ENST00000261834 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
ATG2B-201ENST00000261834 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
ATG2B-201ENST00000261834 WDR62O43379 1518 aa13.11□□□□□ -0.31
ATG2B-201ENST00000261834 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
ATG2B-201ENST00000261834 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
ATG2B-201ENST00000261834 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
ATG2B-201ENST00000261834 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.32
ATG2B-201ENST00000261834 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
ATG2B-201ENST00000261834 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
ATG2B-201ENST00000261834 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
ATG2B-201ENST00000261834 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
ATG2B-201ENST00000261834 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
ATG2B-201ENST00000261834 IGF1RP08069 1367 aa13.04□□□□□ -0.32
ATG2B-201ENST00000261834 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
ATG2B-201ENST00000261834 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
ATG2B-201ENST00000261834 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
ATG2B-201ENST00000261834 CUL7Q14999 1698 aa13.01□□□□□ -0.33
ATG2B-201ENST00000261834 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
ATG2B-201ENST00000261834 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
ATG2B-201ENST00000261834 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
ATG2B-201ENST00000261834 PBRM1Q86U86 1689 aa12.95□□□□□ -0.34
ATG2B-201ENST00000261834 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
ATG2B-201ENST00000261834 CLIP1P30622 1438 aa12.93□□□□□ -0.34
ATG2B-201ENST00000261834 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATG2B-201ENST00000261834 EIF4G3O43432 1585 aaKnown RBP12.91□□□□□ -0.34
ATG2B-201ENST00000261834 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
ATG2B-201ENST00000261834 ZNF608Q9ULD9 1512 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms