RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
CASQ2-201ENST00000261448 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
CASQ2-201ENST00000261448 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
CASQ2-201ENST00000261448 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
CASQ2-201ENST00000261448 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
CASQ2-201ENST00000261448 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
CASQ2-201ENST00000261448 ABCC9O60706 1549 aa21.1■□□□□ 0.97
CASQ2-201ENST00000261448 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.97
CASQ2-201ENST00000261448 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
CASQ2-201ENST00000261448 NACADO15069 1562 aa20.87■□□□□ 0.93
CASQ2-201ENST00000261448 SCRIBQ14160 1630 aa20.83■□□□□ 0.92
CASQ2-201ENST00000261448 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
CASQ2-201ENST00000261448 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.86
CASQ2-201ENST00000261448 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
CASQ2-201ENST00000261448 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
CASQ2-201ENST00000261448 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
CASQ2-201ENST00000261448 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
CASQ2-201ENST00000261448 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
CASQ2-201ENST00000261448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.06■□□□□ 0.8
CASQ2-201ENST00000261448 WIZO95785 1651 aa20.04■□□□□ 0.8
CASQ2-201ENST00000261448 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
CASQ2-201ENST00000261448 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
CASQ2-201ENST00000261448 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
CASQ2-201ENST00000261448 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
CASQ2-201ENST00000261448 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
CASQ2-201ENST00000261448 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
CASQ2-201ENST00000261448 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
CASQ2-201ENST00000261448 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
CASQ2-201ENST00000261448 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
CASQ2-201ENST00000261448 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
CASQ2-201ENST00000261448 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
CASQ2-201ENST00000261448 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
CASQ2-201ENST00000261448 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
CASQ2-201ENST00000261448 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
CASQ2-201ENST00000261448 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
CASQ2-201ENST00000261448 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
CASQ2-201ENST00000261448 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
CASQ2-201ENST00000261448 SOGA1O94964 1423 aa19.09■□□□□ 0.65
CASQ2-201ENST00000261448 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
CASQ2-201ENST00000261448 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
CASQ2-201ENST00000261448 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
CASQ2-201ENST00000261448 CFTRP13569 1480 aa19■□□□□ 0.63
CASQ2-201ENST00000261448 EEA1Q15075 1411 aa18.98■□□□□ 0.63
CASQ2-201ENST00000261448 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
CASQ2-201ENST00000261448 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
CASQ2-201ENST00000261448 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
CASQ2-201ENST00000261448 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
CASQ2-201ENST00000261448 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
CASQ2-201ENST00000261448 CUX1P39880 1505 aa18.85■□□□□ 0.61
CASQ2-201ENST00000261448 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
CASQ2-201ENST00000261448 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
CASQ2-201ENST00000261448 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
CASQ2-201ENST00000261448 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
CASQ2-201ENST00000261448 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
CASQ2-201ENST00000261448 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
CASQ2-201ENST00000261448 KIF21BO75037 1637 aa18.74■□□□□ 0.59
CASQ2-201ENST00000261448 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
CASQ2-201ENST00000261448 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
CASQ2-201ENST00000261448 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
CASQ2-201ENST00000261448 FANCD2Q9BXW9 1451 aa18.66■□□□□ 0.58
CASQ2-201ENST00000261448 NESP48681 1621 aa18.66■□□□□ 0.58
CASQ2-201ENST00000261448 HRCP23327 699 aa18.64■□□□□ 0.57
CASQ2-201ENST00000261448 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
CASQ2-201ENST00000261448 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
CASQ2-201ENST00000261448 PRXQ9BXM0 1461 aa18.6■□□□□ 0.57
CASQ2-201ENST00000261448 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
CASQ2-201ENST00000261448 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
CASQ2-201ENST00000261448 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
CASQ2-201ENST00000261448 CUX2O14529 1486 aa18.52■□□□□ 0.56
CASQ2-201ENST00000261448 CLIP1P30622 1438 aa18.52■□□□□ 0.56
CASQ2-201ENST00000261448 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
CASQ2-201ENST00000261448 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
CASQ2-201ENST00000261448 IGF1RP08069 1367 aa18.48■□□□□ 0.55
CASQ2-201ENST00000261448 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
CASQ2-201ENST00000261448 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
CASQ2-201ENST00000261448 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
CASQ2-201ENST00000261448 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
CASQ2-201ENST00000261448 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
CASQ2-201ENST00000261448 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
CASQ2-201ENST00000261448 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.54
CASQ2-201ENST00000261448 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
CASQ2-201ENST00000261448 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
CASQ2-201ENST00000261448 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
CASQ2-201ENST00000261448 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
CASQ2-201ENST00000261448 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
CASQ2-201ENST00000261448 ARHGAP35Q9NRY4 1499 aa18.25■□□□□ 0.51
CASQ2-201ENST00000261448 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
CASQ2-201ENST00000261448 ABCA5Q8WWZ7 1642 aa18.21■□□□□ 0.5
CASQ2-201ENST00000261448 APLP2Q06481 763 aa18.2■□□□□ 0.5
CASQ2-201ENST00000261448 CUL7Q14999 1698 aa18.19■□□□□ 0.5
CASQ2-201ENST00000261448 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
CASQ2-201ENST00000261448 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
CASQ2-201ENST00000261448 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
CASQ2-201ENST00000261448 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
CASQ2-201ENST00000261448 KANK4Q5T7N3 995 aaPredicted RBP18.1■□□□□ 0.49
CASQ2-201ENST00000261448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
CASQ2-201ENST00000261448 WDR62O43379 1518 aa18.07■□□□□ 0.48
CASQ2-201ENST00000261448 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
CASQ2-201ENST00000261448 CTTNBP2Q8WZ74 1663 aa18.05■□□□□ 0.48
CASQ2-201ENST00000261448 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms