RNA–Protein interactions for RNA: ENST00000258704.3

SPDYE1-201, Transcript of speedy/RINGO cell cycle regulator family member E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE1, Length 2,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE1-201ENST00000258704 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
SPDYE1-201ENST00000258704 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
SPDYE1-201ENST00000258704 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
SPDYE1-201ENST00000258704 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
SPDYE1-201ENST00000258704 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
SPDYE1-201ENST00000258704 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
SPDYE1-201ENST00000258704 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
SPDYE1-201ENST00000258704 ABCC9O60706 1549 aa20.36■□□□□ 0.85
SPDYE1-201ENST00000258704 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
SPDYE1-201ENST00000258704 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
SPDYE1-201ENST00000258704 NACADO15069 1562 aa20■□□□□ 0.79
SPDYE1-201ENST00000258704 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
SPDYE1-201ENST00000258704 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
SPDYE1-201ENST00000258704 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
SPDYE1-201ENST00000258704 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
SPDYE1-201ENST00000258704 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
SPDYE1-201ENST00000258704 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
SPDYE1-201ENST00000258704 WIZO95785 1651 aa19.42■□□□□ 0.7
SPDYE1-201ENST00000258704 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
SPDYE1-201ENST00000258704 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SPDYE1-201ENST00000258704 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
SPDYE1-201ENST00000258704 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
SPDYE1-201ENST00000258704 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
SPDYE1-201ENST00000258704 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
SPDYE1-201ENST00000258704 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
SPDYE1-201ENST00000258704 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
SPDYE1-201ENST00000258704 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
SPDYE1-201ENST00000258704 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
SPDYE1-201ENST00000258704 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
SPDYE1-201ENST00000258704 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
SPDYE1-201ENST00000258704 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
SPDYE1-201ENST00000258704 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
SPDYE1-201ENST00000258704 HRCP23327 699 aa18.88■□□□□ 0.61
SPDYE1-201ENST00000258704 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
SPDYE1-201ENST00000258704 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
SPDYE1-201ENST00000258704 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
SPDYE1-201ENST00000258704 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
SPDYE1-201ENST00000258704 SOGA1O94964 1423 aa18.64■□□□□ 0.58
SPDYE1-201ENST00000258704 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
SPDYE1-201ENST00000258704 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
SPDYE1-201ENST00000258704 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.57
SPDYE1-201ENST00000258704 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
SPDYE1-201ENST00000258704 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.55
SPDYE1-201ENST00000258704 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
SPDYE1-201ENST00000258704 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
SPDYE1-201ENST00000258704 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
SPDYE1-201ENST00000258704 EEA1Q15075 1411 aa18.43■□□□□ 0.54
SPDYE1-201ENST00000258704 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
SPDYE1-201ENST00000258704 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
SPDYE1-201ENST00000258704 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
SPDYE1-201ENST00000258704 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
SPDYE1-201ENST00000258704 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
SPDYE1-201ENST00000258704 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
SPDYE1-201ENST00000258704 CFTRP13569 1480 aa18.29■□□□□ 0.52
SPDYE1-201ENST00000258704 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
SPDYE1-201ENST00000258704 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
SPDYE1-201ENST00000258704 CUX1P39880 1505 aa18.23■□□□□ 0.51
SPDYE1-201ENST00000258704 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
SPDYE1-201ENST00000258704 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
SPDYE1-201ENST00000258704 KIF21BO75037 1637 aa18.19■□□□□ 0.5
SPDYE1-201ENST00000258704 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
SPDYE1-201ENST00000258704 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
SPDYE1-201ENST00000258704 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
SPDYE1-201ENST00000258704 CLIP1P30622 1438 aa18.1■□□□□ 0.49
SPDYE1-201ENST00000258704 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
SPDYE1-201ENST00000258704 KIF27Q86VH2 1401 aa18.05■□□□□ 0.48
SPDYE1-201ENST00000258704 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
SPDYE1-201ENST00000258704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
SPDYE1-201ENST00000258704 NESP48681 1621 aa18■□□□□ 0.47
SPDYE1-201ENST00000258704 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
SPDYE1-201ENST00000258704 CUX2O14529 1486 aa17.97■□□□□ 0.47
SPDYE1-201ENST00000258704 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
SPDYE1-201ENST00000258704 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
SPDYE1-201ENST00000258704 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.47
SPDYE1-201ENST00000258704 IGF1RP08069 1367 aa17.93■□□□□ 0.46
SPDYE1-201ENST00000258704 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.46
SPDYE1-201ENST00000258704 APLP2Q06481 763 aa17.88■□□□□ 0.45
SPDYE1-201ENST00000258704 ARAP1Q96P48 1450 aa17.85■□□□□ 0.45
SPDYE1-201ENST00000258704 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
SPDYE1-201ENST00000258704 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.44
SPDYE1-201ENST00000258704 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
SPDYE1-201ENST00000258704 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
SPDYE1-201ENST00000258704 POLA1P09884 1462 aaPredicted RBP17.8■□□□□ 0.44
SPDYE1-201ENST00000258704 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
SPDYE1-201ENST00000258704 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
SPDYE1-201ENST00000258704 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
SPDYE1-201ENST00000258704 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
SPDYE1-201ENST00000258704 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
SPDYE1-201ENST00000258704 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
SPDYE1-201ENST00000258704 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
SPDYE1-201ENST00000258704 TDRD9Q8NDG6 1382 aaKnown RBP17.67■□□□□ 0.42
SPDYE1-201ENST00000258704 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
SPDYE1-201ENST00000258704 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
SPDYE1-201ENST00000258704 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.4
SPDYE1-201ENST00000258704 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
SPDYE1-201ENST00000258704 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
SPDYE1-201ENST00000258704 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
SPDYE1-201ENST00000258704 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
SPDYE1-201ENST00000258704 CUL7Q14999 1698 aa17.52■□□□□ 0.4
SPDYE1-201ENST00000258704 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms