RNA–Protein interactions for RNA: ENST00000241261.6

TNFSF10-201, Transcript of TNF superfamily member 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF10, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-201ENST00000241261 NISCHQ9Y2I1 1504 aa25.24■■□□□ 1.63
TNFSF10-201ENST00000241261 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
TNFSF10-201ENST00000241261 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
TNFSF10-201ENST00000241261 ABCC9O60706 1549 aa21.67■■□□□ 1.06
TNFSF10-201ENST00000241261 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
TNFSF10-201ENST00000241261 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
TNFSF10-201ENST00000241261 NACADO15069 1562 aa20.95■□□□□ 0.94
TNFSF10-201ENST00000241261 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
TNFSF10-201ENST00000241261 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
TNFSF10-201ENST00000241261 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.93
TNFSF10-201ENST00000241261 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
TNFSF10-201ENST00000241261 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
TNFSF10-201ENST00000241261 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
TNFSF10-201ENST00000241261 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
TNFSF10-201ENST00000241261 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
TNFSF10-201ENST00000241261 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
TNFSF10-201ENST00000241261 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
TNFSF10-201ENST00000241261 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
TNFSF10-201ENST00000241261 CECR2Q9BXF3 1484 aa19.66■□□□□ 0.74
TNFSF10-201ENST00000241261 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
TNFSF10-201ENST00000241261 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
TNFSF10-201ENST00000241261 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
TNFSF10-201ENST00000241261 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
TNFSF10-201ENST00000241261 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
TNFSF10-201ENST00000241261 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
TNFSF10-201ENST00000241261 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
TNFSF10-201ENST00000241261 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
TNFSF10-201ENST00000241261 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
TNFSF10-201ENST00000241261 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
TNFSF10-201ENST00000241261 WIZO95785 1651 aa19.3■□□□□ 0.68
TNFSF10-201ENST00000241261 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
TNFSF10-201ENST00000241261 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
TNFSF10-201ENST00000241261 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
TNFSF10-201ENST00000241261 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
TNFSF10-201ENST00000241261 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
TNFSF10-201ENST00000241261 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
TNFSF10-201ENST00000241261 NESP48681 1621 aa18.83■□□□□ 0.61
TNFSF10-201ENST00000241261 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
TNFSF10-201ENST00000241261 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
TNFSF10-201ENST00000241261 CFTRP13569 1480 aa18.7■□□□□ 0.58
TNFSF10-201ENST00000241261 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
TNFSF10-201ENST00000241261 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
TNFSF10-201ENST00000241261 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
TNFSF10-201ENST00000241261 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
TNFSF10-201ENST00000241261 FANCD2Q9BXW9 1451 aa18.56■□□□□ 0.56
TNFSF10-201ENST00000241261 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
TNFSF10-201ENST00000241261 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
TNFSF10-201ENST00000241261 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
TNFSF10-201ENST00000241261 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
TNFSF10-201ENST00000241261 WDR62O43379 1518 aa18.39■□□□□ 0.54
TNFSF10-201ENST00000241261 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
TNFSF10-201ENST00000241261 CUX2O14529 1486 aa18.36■□□□□ 0.53
TNFSF10-201ENST00000241261 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
TNFSF10-201ENST00000241261 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
TNFSF10-201ENST00000241261 ABCC8Q09428 1581 aa18.27■□□□□ 0.51
TNFSF10-201ENST00000241261 CUX1P39880 1505 aa18.26■□□□□ 0.51
TNFSF10-201ENST00000241261 SYNJ1O43426 1573 aa18.18■□□□□ 0.5
TNFSF10-201ENST00000241261 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
TNFSF10-201ENST00000241261 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
TNFSF10-201ENST00000241261 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
TNFSF10-201ENST00000241261 TOP2BQ02880 1626 aa18.15■□□□□ 0.5
TNFSF10-201ENST00000241261 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
TNFSF10-201ENST00000241261 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
TNFSF10-201ENST00000241261 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
TNFSF10-201ENST00000241261 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
TNFSF10-201ENST00000241261 FOXD1Q16676 465 aa18.08■□□□□ 0.48
TNFSF10-201ENST00000241261 SOGA1O94964 1423 aa18.06■□□□□ 0.48
TNFSF10-201ENST00000241261 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
TNFSF10-201ENST00000241261 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
TNFSF10-201ENST00000241261 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
TNFSF10-201ENST00000241261 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
TNFSF10-201ENST00000241261 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
TNFSF10-201ENST00000241261 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
TNFSF10-201ENST00000241261 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
TNFSF10-201ENST00000241261 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
TNFSF10-201ENST00000241261 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
TNFSF10-201ENST00000241261 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
TNFSF10-201ENST00000241261 GRIN2BQ13224 1484 aa17.83■□□□□ 0.44
TNFSF10-201ENST00000241261 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
TNFSF10-201ENST00000241261 CHD1O14646 1710 aa17.76■□□□□ 0.43
TNFSF10-201ENST00000241261 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
TNFSF10-201ENST00000241261 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
TNFSF10-201ENST00000241261 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
TNFSF10-201ENST00000241261 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
TNFSF10-201ENST00000241261 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
TNFSF10-201ENST00000241261 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
TNFSF10-201ENST00000241261 IGF1RP08069 1367 aa17.68■□□□□ 0.42
TNFSF10-201ENST00000241261 CUL7Q14999 1698 aa17.66■□□□□ 0.42
TNFSF10-201ENST00000241261 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
TNFSF10-201ENST00000241261 FBLN2P98095 1184 aa17.64■□□□□ 0.41
TNFSF10-201ENST00000241261 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
TNFSF10-201ENST00000241261 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
TNFSF10-201ENST00000241261 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
TNFSF10-201ENST00000241261 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
TNFSF10-201ENST00000241261 EEA1Q15075 1411 aa17.56■□□□□ 0.4
TNFSF10-201ENST00000241261 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
TNFSF10-201ENST00000241261 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
TNFSF10-201ENST00000241261 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
TNFSF10-201ENST00000241261 NUP160Q12769 1436 aa17.53■□□□□ 0.4
TNFSF10-201ENST00000241261 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms