RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
NDUFB3-201ENST00000237889 ABCC9O60706 1549 aa23.22■■□□□ 1.31
NDUFB3-201ENST00000237889 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
NDUFB3-201ENST00000237889 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
NDUFB3-201ENST00000237889 CCDC180Q9P1Z9 1646 aa22.32■■□□□ 1.16
NDUFB3-201ENST00000237889 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
NDUFB3-201ENST00000237889 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
NDUFB3-201ENST00000237889 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
NDUFB3-201ENST00000237889 NACADO15069 1562 aa21.44■■□□□ 1.02
NDUFB3-201ENST00000237889 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
NDUFB3-201ENST00000237889 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
NDUFB3-201ENST00000237889 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
NDUFB3-201ENST00000237889 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
NDUFB3-201ENST00000237889 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
NDUFB3-201ENST00000237889 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
NDUFB3-201ENST00000237889 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
NDUFB3-201ENST00000237889 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
NDUFB3-201ENST00000237889 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
NDUFB3-201ENST00000237889 CUX2O14529 1486 aa20.38■□□□□ 0.85
NDUFB3-201ENST00000237889 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
NDUFB3-201ENST00000237889 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
NDUFB3-201ENST00000237889 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
NDUFB3-201ENST00000237889 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
NDUFB3-201ENST00000237889 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
NDUFB3-201ENST00000237889 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
NDUFB3-201ENST00000237889 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
NDUFB3-201ENST00000237889 NESP48681 1621 aa19.65■□□□□ 0.74
NDUFB3-201ENST00000237889 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
NDUFB3-201ENST00000237889 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
NDUFB3-201ENST00000237889 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
NDUFB3-201ENST00000237889 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
NDUFB3-201ENST00000237889 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
NDUFB3-201ENST00000237889 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
NDUFB3-201ENST00000237889 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
NDUFB3-201ENST00000237889 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
NDUFB3-201ENST00000237889 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
NDUFB3-201ENST00000237889 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
NDUFB3-201ENST00000237889 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
NDUFB3-201ENST00000237889 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
NDUFB3-201ENST00000237889 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
NDUFB3-201ENST00000237889 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
NDUFB3-201ENST00000237889 WDR62O43379 1518 aa19.19■□□□□ 0.66
NDUFB3-201ENST00000237889 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
NDUFB3-201ENST00000237889 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
NDUFB3-201ENST00000237889 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
NDUFB3-201ENST00000237889 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
NDUFB3-201ENST00000237889 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
NDUFB3-201ENST00000237889 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
NDUFB3-201ENST00000237889 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
NDUFB3-201ENST00000237889 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
NDUFB3-201ENST00000237889 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
NDUFB3-201ENST00000237889 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
NDUFB3-201ENST00000237889 CFTRP13569 1480 aa18.81■□□□□ 0.6
NDUFB3-201ENST00000237889 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
NDUFB3-201ENST00000237889 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
NDUFB3-201ENST00000237889 FBLN2P98095 1184 aa18.72■□□□□ 0.59
NDUFB3-201ENST00000237889 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
NDUFB3-201ENST00000237889 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
NDUFB3-201ENST00000237889 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
NDUFB3-201ENST00000237889 WIZO95785 1651 aa18.59■□□□□ 0.57
NDUFB3-201ENST00000237889 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
NDUFB3-201ENST00000237889 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
NDUFB3-201ENST00000237889 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
NDUFB3-201ENST00000237889 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
NDUFB3-201ENST00000237889 EIF4G3O43432 1585 aaKnown RBP18.46■□□□□ 0.55
NDUFB3-201ENST00000237889 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
NDUFB3-201ENST00000237889 FOXD1Q16676 465 aa18.38■□□□□ 0.53
NDUFB3-201ENST00000237889 CHD1O14646 1710 aa18.37■□□□□ 0.53
NDUFB3-201ENST00000237889 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
NDUFB3-201ENST00000237889 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
NDUFB3-201ENST00000237889 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
NDUFB3-201ENST00000237889 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
NDUFB3-201ENST00000237889 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
NDUFB3-201ENST00000237889 SOGA1O94964 1423 aa18.28■□□□□ 0.52
NDUFB3-201ENST00000237889 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
NDUFB3-201ENST00000237889 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.51
NDUFB3-201ENST00000237889 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
NDUFB3-201ENST00000237889 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
NDUFB3-201ENST00000237889 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
NDUFB3-201ENST00000237889 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
NDUFB3-201ENST00000237889 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
NDUFB3-201ENST00000237889 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
NDUFB3-201ENST00000237889 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
NDUFB3-201ENST00000237889 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
NDUFB3-201ENST00000237889 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
NDUFB3-201ENST00000237889 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
NDUFB3-201ENST00000237889 NPM1P06748 294 aaKnown RBP eCLIP18.06■□□□□ 0.48
NDUFB3-201ENST00000237889 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
NDUFB3-201ENST00000237889 FGD5Q6ZNL6 1462 aa18.02■□□□□ 0.48
NDUFB3-201ENST00000237889 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
NDUFB3-201ENST00000237889 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
NDUFB3-201ENST00000237889 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
NDUFB3-201ENST00000237889 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
NDUFB3-201ENST00000237889 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
NDUFB3-201ENST00000237889 NUP160Q12769 1436 aa17.85■□□□□ 0.45
NDUFB3-201ENST00000237889 CUX1P39880 1505 aa17.83■□□□□ 0.45
NDUFB3-201ENST00000237889 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
NDUFB3-201ENST00000237889 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
NDUFB3-201ENST00000237889 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
NDUFB3-201ENST00000237889 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms