RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
CCL13-201ENST00000225844 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
CCL13-201ENST00000225844 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
CCL13-201ENST00000225844 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CCL13-201ENST00000225844 ABCC9O60706 1549 aa16.65■□□□□ 0.26
CCL13-201ENST00000225844 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
CCL13-201ENST00000225844 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
CCL13-201ENST00000225844 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
CCL13-201ENST00000225844 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
CCL13-201ENST00000225844 FOXD1Q16676 465 aa15.51■□□□□ 0.07
CCL13-201ENST00000225844 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCL13-201ENST00000225844 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
CCL13-201ENST00000225844 NACADO15069 1562 aa15.41■□□□□ 0.06
CCL13-201ENST00000225844 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
CCL13-201ENST00000225844 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
CCL13-201ENST00000225844 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
CCL13-201ENST00000225844 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
CCL13-201ENST00000225844 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
CCL13-201ENST00000225844 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
CCL13-201ENST00000225844 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
CCL13-201ENST00000225844 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
CCL13-201ENST00000225844 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
CCL13-201ENST00000225844 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
CCL13-201ENST00000225844 ADRA2BP18089 450 aa14.87□□□□□ -0.03
CCL13-201ENST00000225844 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
CCL13-201ENST00000225844 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
CCL13-201ENST00000225844 SCRIBQ14160 1630 aa14.79□□□□□ -0.04
CCL13-201ENST00000225844 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
CCL13-201ENST00000225844 CUX2O14529 1486 aa14.44□□□□□ -0.1
CCL13-201ENST00000225844 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
CCL13-201ENST00000225844 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
CCL13-201ENST00000225844 MSH5O43196 834 aa14.2□□□□□ -0.14
CCL13-201ENST00000225844 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
CCL13-201ENST00000225844 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
CCL13-201ENST00000225844 NESP48681 1621 aa14.16□□□□□ -0.14
CCL13-201ENST00000225844 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
CCL13-201ENST00000225844 HMGXB3Q12766 1538 aa14.08□□□□□ -0.16
CCL13-201ENST00000225844 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
CCL13-201ENST00000225844 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
CCL13-201ENST00000225844 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
CCL13-201ENST00000225844 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
CCL13-201ENST00000225844 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.18
CCL13-201ENST00000225844 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
CCL13-201ENST00000225844 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
CCL13-201ENST00000225844 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
CCL13-201ENST00000225844 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
CCL13-201ENST00000225844 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
CCL13-201ENST00000225844 MROH2BQ7Z745 1585 aa13.81□□□□□ -0.2
CCL13-201ENST00000225844 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
CCL13-201ENST00000225844 WDR62O43379 1518 aa13.78□□□□□ -0.2
CCL13-201ENST00000225844 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
CCL13-201ENST00000225844 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.22
CCL13-201ENST00000225844 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
CCL13-201ENST00000225844 WIZO95785 1651 aa13.59□□□□□ -0.23
CCL13-201ENST00000225844 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
CCL13-201ENST00000225844 CFTRP13569 1480 aa13.57□□□□□ -0.24
CCL13-201ENST00000225844 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
CCL13-201ENST00000225844 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
CCL13-201ENST00000225844 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
CCL13-201ENST00000225844 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
CCL13-201ENST00000225844 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
CCL13-201ENST00000225844 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
CCL13-201ENST00000225844 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
CCL13-201ENST00000225844 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
CCL13-201ENST00000225844 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
CCL13-201ENST00000225844 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
CCL13-201ENST00000225844 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
CCL13-201ENST00000225844 IFT140Q96RY7 1462 aa13.46□□□□□ -0.25
CCL13-201ENST00000225844 FBLN2P98095 1184 aa13.42□□□□□ -0.26
CCL13-201ENST00000225844 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
CCL13-201ENST00000225844 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
CCL13-201ENST00000225844 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
CCL13-201ENST00000225844 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
CCL13-201ENST00000225844 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCL13-201ENST00000225844 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
CCL13-201ENST00000225844 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
CCL13-201ENST00000225844 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
CCL13-201ENST00000225844 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
CCL13-201ENST00000225844 CHD1O14646 1710 aa13.25□□□□□ -0.29
CCL13-201ENST00000225844 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
CCL13-201ENST00000225844 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
CCL13-201ENST00000225844 KCNA4P22459 653 aa13.22□□□□□ -0.29
CCL13-201ENST00000225844 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
CCL13-201ENST00000225844 CHMP7Q8WUX9 453 aaPredicted RBP13.22□□□□□ -0.29
CCL13-201ENST00000225844 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
CCL13-201ENST00000225844 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
CCL13-201ENST00000225844 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
CCL13-201ENST00000225844 SOGA1O94964 1423 aa13.18□□□□□ -0.3
CCL13-201ENST00000225844 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
CCL13-201ENST00000225844 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
CCL13-201ENST00000225844 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
CCL13-201ENST00000225844 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
CCL13-201ENST00000225844 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
CCL13-201ENST00000225844 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
CCL13-201ENST00000225844 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
CCL13-201ENST00000225844 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
CCL13-201ENST00000225844 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
CCL13-201ENST00000225844 SYNJ2O15056 1496 aa13.07□□□□□ -0.32
CCL13-201ENST00000225844 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
CCL13-201ENST00000225844 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms