RNA–Protein interactions for RNA: ENSMUST00000077935.5

Trps1-201, Transcript of Zinc finger transcription factor Trps1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trps1, Length 4,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1-201ENSMUST00000077935 Rhox8Q6VSS7 320 aa12.7□□□□□ -0.38
Trps1-201ENSMUST00000077935 Rtl1Q7M732 1744 aa12.6□□□□□ -0.39
Trps1-201ENSMUST00000077935 NischQ80TM9 1593 aa12.12□□□□□ -0.47
Trps1-201ENSMUST00000077935 Rpgrip1Q9EPQ2 1331 aa12□□□□□ -0.49
Trps1-201ENSMUST00000077935 Gm35339A0A140LHH9 1649 aa11.78□□□□□ -0.52
Trps1-201ENSMUST00000077935 Ccdc180J3QNE4 1664 aa11.78□□□□□ -0.52
Trps1-201ENSMUST00000077935 Dcaf1Q80TR8 1506 aa11.65□□□□□ -0.54
Trps1-201ENSMUST00000077935 Myt1Q8CFC2 1127 aa11.6□□□□□ -0.55
Trps1-201ENSMUST00000077935 Abcc9P70170 1546 aa11.44□□□□□ -0.58
Trps1-201ENSMUST00000077935 Esf1Q3V1V3 845 aaKnown RBP11.37□□□□□ -0.59
Trps1-201ENSMUST00000077935 Ccdc136Q3TVA9 1136 aa11.36□□□□□ -0.59
Trps1-201ENSMUST00000077935 Trim41Q5NCC3 630 aa11.35□□□□□ -0.59
Trps1-201ENSMUST00000077935 Abcc8B2RUS7 1588 aa11.25□□□□□ -0.61
Trps1-201ENSMUST00000077935 Cngb1E1AZ71 1325 aa11.22□□□□□ -0.61
Trps1-201ENSMUST00000077935 Zcchc6Q5BLK4 1491 aaKnown RBP11.09□□□□□ -0.63
Trps1-201ENSMUST00000077935 CatipB9EKE5 520 aa11.02□□□□□ -0.64
Trps1-201ENSMUST00000077935 Zeb1Q64318 1117 aa10.99□□□□□ -0.65
Trps1-201ENSMUST00000077935 Npm2Q80W85 207 aa10.97□□□□□ -0.65
Trps1-201ENSMUST00000077935 Gab3Q8BSM5 595 aa10.89□□□□□ -0.67
Trps1-201ENSMUST00000077935 Acin1Q9JIX8 1338 aaKnown RBP10.78□□□□□ -0.68
Trps1-201ENSMUST00000077935 HrcG5E8J6 738 aa10.77□□□□□ -0.69
Trps1-201ENSMUST00000077935 Pcgf6Q99NA9 353 aa10.77□□□□□ -0.69
Trps1-201ENSMUST00000077935 Myt1lP97500 1187 aa10.77□□□□□ -0.69
Trps1-201ENSMUST00000077935 Ehmt2Q9Z148 1263 aaKnown RBP10.71□□□□□ -0.69
Trps1-201ENSMUST00000077935 NacadQ5SWP3 1504 aa10.7□□□□□ -0.7
Trps1-201ENSMUST00000077935 Il27Q8K3I6 234 aa10.69□□□□□ -0.7
Trps1-201ENSMUST00000077935 Ube2uB1AUC4 352 aa10.67□□□□□ -0.7
Trps1-201ENSMUST00000077935 Rb1cc1Q9ESK9 1588 aa10.64□□□□□ -0.71
Trps1-201ENSMUST00000077935 Las1lA2BE28 776 aaKnown RBP10.6□□□□□ -0.71
Trps1-201ENSMUST00000077935 Brd4Q9ESU6 1400 aaKnown RBP10.59□□□□□ -0.71
Trps1-201ENSMUST00000077935 Npm1Q61937 292 aaKnown RBP10.54□□□□□ -0.72
Trps1-201ENSMUST00000077935 Baz1aO88379 1555 aa10.46□□□□□ -0.74
Trps1-201ENSMUST00000077935 CenpbP27790 599 aa10.43□□□□□ -0.74
Trps1-201ENSMUST00000077935 DiexfQ8BTT6 772 aaKnown RBP10.43□□□□□ -0.74
Trps1-201ENSMUST00000077935 Kdm5dQ62240 1548 aa10.42□□□□□ -0.74
Trps1-201ENSMUST00000077935 Wdr66E9Q743 1299 aa10.4□□□□□ -0.74
Trps1-201ENSMUST00000077935 UbtfP25976 765 aaKnown RBP10.4□□□□□ -0.74
Trps1-201ENSMUST00000077935 Unc13aQ4KUS2 1712 aa10.4□□□□□ -0.74
Trps1-201ENSMUST00000077935 NefmP08553 848 aa10.39□□□□□ -0.75
Trps1-201ENSMUST00000077935 Ubl4bQ9CQ84 188 aa10.35□□□□□ -0.75
Trps1-201ENSMUST00000077935 Aplp2Q06335 707 aa10.34□□□□□ -0.75
Trps1-201ENSMUST00000077935 Cdk11bP24788 784 aaKnown RBP10.31□□□□□ -0.76
Trps1-201ENSMUST00000077935 Ercc6F8VPZ5 1481 aa10.3□□□□□ -0.76
Trps1-201ENSMUST00000077935 Ap3b1Q9Z1T1 1105 aa10.26□□□□□ -0.77
Trps1-201ENSMUST00000077935 Pds5bQ4VA53 1446 aaKnown RBP10.24□□□□□ -0.77
Trps1-201ENSMUST00000077935 Sycp2Q9CUU3 1500 aa10.23□□□□□ -0.77
Trps1-201ENSMUST00000077935 Anks4bQ8K3X6 423 aa10.22□□□□□ -0.77
Trps1-201ENSMUST00000077935 Cep164Q5DU05 1446 aa10.21□□□□□ -0.77
Trps1-201ENSMUST00000077935 Rsf1E9PWW9 1441 aaKnown RBP10.21□□□□□ -0.78
Trps1-201ENSMUST00000077935 Fam50aQ9WV03 339 aaKnown RBP10.21□□□□□ -0.78
Trps1-201ENSMUST00000077935 Crybg2B7ZCC2 1516 aa10.2□□□□□ -0.78
Trps1-201ENSMUST00000077935 NclP09405 707 aaKnown RBP10.16□□□□□ -0.78
Trps1-201ENSMUST00000077935 Golga3P55937 1487 aa10.15□□□□□ -0.78
Trps1-201ENSMUST00000077935 Smarca2Q6DIC0 1577 aa10.14□□□□□ -0.79
Trps1-201ENSMUST00000077935 Kif15Q6P9L6 1387 aa10.13□□□□□ -0.79
Trps1-201ENSMUST00000077935 Bcl11aQ9QYE3 773 aa10.13□□□□□ -0.79
Trps1-201ENSMUST00000077935 ScribQ80U72 1612 aa10.13□□□□□ -0.79
Trps1-201ENSMUST00000077935 Chic1Q8CBW7 227 aa10.1□□□□□ -0.79
Trps1-201ENSMUST00000077935 Ccdc18Q640L5 1455 aa10.1□□□□□ -0.79
Trps1-201ENSMUST00000077935 Stra8P70278 393 aa10.08□□□□□ -0.8
Trps1-201ENSMUST00000077935 Lmod2Q3UHZ5 550 aa10.06□□□□□ -0.8
Trps1-201ENSMUST00000077935 Clip1Q922J3 1391 aa10.06□□□□□ -0.8
Trps1-201ENSMUST00000077935 Rtl5Q5DTT4 599 aa10.05□□□□□ -0.8
Trps1-201ENSMUST00000077935 Plekhg3Q4VAC9 1341 aa10.02□□□□□ -0.81
Trps1-201ENSMUST00000077935 Anp32bQ9EST5 272 aaKnown RBP10.01□□□□□ -0.81
Trps1-201ENSMUST00000077935 Camsap1A2AHC3 1581 aa10□□□□□ -0.81
Trps1-201ENSMUST00000077935 Hdac5Q9Z2V6 1113 aa10□□□□□ -0.81
Trps1-201ENSMUST00000077935 Atad2bE9Q166 1460 aaKnown RBP10□□□□□ -0.81
Trps1-201ENSMUST00000077935 Os9Q8K2C7 672 aa10□□□□□ -0.81
Trps1-201ENSMUST00000077935 Lamc1P02468 1607 aaKnown RBP9.99□□□□□ -0.81
Trps1-201ENSMUST00000077935 NrdcQ8BHG1 1161 aa9.97□□□□□ -0.81
Trps1-201ENSMUST00000077935 Pelp1Q9DBD5 1123 aaKnown RBP9.97□□□□□ -0.81
Trps1-201ENSMUST00000077935 1700123L14RikQ3V2K7 440 aa9.96□□□□□ -0.81
Trps1-201ENSMUST00000077935 Ifnlr1Q8CGK5 535 aa9.96□□□□□ -0.81
Trps1-201ENSMUST00000077935 Ythdc1E9Q5K9 736 aaKnown RBP9.96□□□□□ -0.82
Trps1-201ENSMUST00000077935 TonslQ6NZL6 1363 aa9.95□□□□□ -0.82
Trps1-201ENSMUST00000077935 Neurod1Q60867 357 aa9.94□□□□□ -0.82
Trps1-201ENSMUST00000077935 Fkbp15Q6P9Q6 1216 aaKnown RBP9.94□□□□□ -0.82
Trps1-201ENSMUST00000077935 Ccdc9Q8VC31 543 aaKnown RBP9.94□□□□□ -0.82
Trps1-201ENSMUST00000077935 Col17a1Q07563 1470 aa9.94□□□□□ -0.82
Trps1-201ENSMUST00000077935 Ccer2J3QPU5 274 aa9.93□□□□□ -0.82
Trps1-201ENSMUST00000077935 Phldb1Q6PDH0 1371 aaKnown RBP9.93□□□□□ -0.82
Trps1-201ENSMUST00000077935 Mier1Q5UAK0 511 aa9.93□□□□□ -0.82
Trps1-201ENSMUST00000077935 Fgd1P52734 960 aa9.92□□□□□ -0.82
Trps1-201ENSMUST00000077935 CftrP26361 1476 aa9.92□□□□□ -0.82
Trps1-201ENSMUST00000077935 Hnrnpul2Q00PI9 745 aaKnown RBP9.91□□□□□ -0.82
Trps1-201ENSMUST00000077935 Fmn1Q05860 1466 aa9.91□□□□□ -0.82
Trps1-201ENSMUST00000077935 Ttbk1Q6PCN3 1308 aa9.91□□□□□ -0.82
Trps1-201ENSMUST00000077935 Gm13697A2AK42 830 aa9.91□□□□□ -0.82
Trps1-201ENSMUST00000077935 Setd5Q5XJV7 1441 aa9.9□□□□□ -0.82
Trps1-201ENSMUST00000077935 Smarca4Q3TKT4 1613 aaKnown RBP9.9□□□□□ -0.82
Trps1-201ENSMUST00000077935 TchhA0A0B4J1F9 1599 aa9.9□□□□□ -0.82
Trps1-201ENSMUST00000077935 Slc24a1Q91WD8 1130 aa9.87□□□□□ -0.83
Trps1-201ENSMUST00000077935 Camsap2Q8C1B1 1461 aa9.86□□□□□ -0.83
Trps1-201ENSMUST00000077935 Zbtb7cQ8VCZ7 619 aa9.86□□□□□ -0.83
Trps1-201ENSMUST00000077935 BlmO88700 1416 aa9.86□□□□□ -0.83
Trps1-201ENSMUST00000077935 Cecr2E9Q2Z1 1453 aa9.85□□□□□ -0.83
Trps1-201ENSMUST00000077935 Clstn2Q9ER65 966 aa9.85□□□□□ -0.83
Trps1-201ENSMUST00000077935 Eea1Q8BL66 1411 aa9.84□□□□□ -0.83
Trps1-201ENSMUST00000077935 Cux2P70298 1426 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms