Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm25239-201ENSMUST00000174915 86 ntBASIC87.29■■■■■ 11.56
Gm35339A0A140LHH9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC81.36■■■■■ 10.62
Gm35339A0A140LHH9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC79.47■■■■■ 10.31
Gm35339A0A140LHH9 Gm24109-201ENSMUST00000175489 103 ntBASIC76.48■■■■■ 9.83
Gm35339A0A140LHH9 Gm15042-201ENSMUST00000120212 883 ntBASIC75.5■■■■■ 9.68
Gm35339A0A140LHH9 Gm15045-201ENSMUST00000117359 883 ntBASIC74.11■■■■■ 9.45
Gm35339A0A140LHH9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC73.87■■■■■ 9.42
Gm35339A0A140LHH9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC73.31■■■■■ 9.33
Gm35339A0A140LHH9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC73.24■■■■■ 9.31
Gm35339A0A140LHH9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC73.1■■■■■ 9.29
Gm35339A0A140LHH9 Gm23366-201ENSMUST00000175022 89 ntBASIC72.63■■■■■ 9.22
Gm35339A0A140LHH9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC71.24■■■■■ 9
Gm35339A0A140LHH9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC70.61■■■■■ 8.89
Gm35339A0A140LHH9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC70.54■■■■■ 8.88
Gm35339A0A140LHH9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC70.43■■■■■ 8.87
Gm35339A0A140LHH9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC70.2■■■■■ 8.83
Gm35339A0A140LHH9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC69.85■■■■■ 8.77
Gm35339A0A140LHH9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC69.55■■■■■ 8.72
Gm35339A0A140LHH9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC69.43■■■■■ 8.71
Gm35339A0A140LHH9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC69.37■■■■■ 8.7
Gm35339A0A140LHH9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC69.31■■■■■ 8.69
Gm35339A0A140LHH9 Gm25238-201ENSMUST00000174914 89 ntBASIC69.17■■■■■ 8.66
Gm35339A0A140LHH9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC69.12■■■■■ 8.65
Gm35339A0A140LHH9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC68.69■■■■■ 8.59
Gm35339A0A140LHH9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC68.17■■■■■ 8.5
Gm35339A0A140LHH9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC68.01■■■■■ 8.48
Gm35339A0A140LHH9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC67.62■■■■■ 8.42
Gm35339A0A140LHH9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC67.59■■■■■ 8.41
Gm35339A0A140LHH9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC67.43■■■■■ 8.38
Gm35339A0A140LHH9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC67.29■■■■■ 8.36
Gm35339A0A140LHH9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC67.29■■■■■ 8.36
Gm35339A0A140LHH9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC67.18■■■■■ 8.34
Gm35339A0A140LHH9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC66.96■■■■■ 8.31
Gm35339A0A140LHH9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC66.89■■■■■ 8.3
Gm35339A0A140LHH9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC66.88■■■■■ 8.3
Gm35339A0A140LHH9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC66.87■■■■■ 8.3
Gm35339A0A140LHH9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC66.8■■■■■ 8.28
Gm35339A0A140LHH9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC66.68■■■■■ 8.27
Gm35339A0A140LHH9 Gm25262-201ENSMUST00000174934 133 ntBASIC66.36■■■■■ 8.21
Gm35339A0A140LHH9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC66.06■■■■■ 8.17
Gm35339A0A140LHH9 Gm27325-201ENSMUST00000175467 74 ntBASIC65.93■■■■■ 8.15
Gm35339A0A140LHH9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC65.89■■■■■ 8.14
Gm35339A0A140LHH9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC65.88■■■■■ 8.14
Gm35339A0A140LHH9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC65.71■■■■■ 8.11
Gm35339A0A140LHH9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC65.58■■■■■ 8.09
Gm35339A0A140LHH9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC65.52■■■■■ 8.08
Gm35339A0A140LHH9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC65.41■■■■■ 8.06
Gm35339A0A140LHH9 Rab21-202ENSMUST00000218831 843 ntBASIC65.3■■■■■ 8.04
Gm35339A0A140LHH9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC65.18■■■■■ 8.02
Gm35339A0A140LHH9 Gm26115-201ENSMUST00000175605 87 ntBASIC65.15■■■■■ 8.02
Gm35339A0A140LHH9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC65.08■■■■■ 8.01
Gm35339A0A140LHH9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC64.99■■■■■ 7.99
Gm35339A0A140LHH9 Gm8109-201ENSMUST00000194076 746 ntBASIC64.97■■■■■ 7.99
Gm35339A0A140LHH9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC64.91■■■■■ 7.98
Gm35339A0A140LHH9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC64.9■■■■■ 7.98
Gm35339A0A140LHH9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC64.77■■■■■ 7.96
Gm35339A0A140LHH9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC64.73■■■■■ 7.95
Gm35339A0A140LHH9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC64.72■■■■■ 7.95
Gm35339A0A140LHH9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC64.67■■■■■ 7.94
Gm35339A0A140LHH9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC64.66■■■■■ 7.94
Gm35339A0A140LHH9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC64.65■■■■■ 7.94
Gm35339A0A140LHH9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC64.37■■■■■ 7.9
Gm35339A0A140LHH9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC64.15■■■■■ 7.86
Gm35339A0A140LHH9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC64.14■■■■■ 7.86
Gm35339A0A140LHH9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC64.06■■■■■ 7.84
Gm35339A0A140LHH9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC64.01■■■■■ 7.84
Gm35339A0A140LHH9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC63.76■■■■■ 7.8
Gm35339A0A140LHH9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC63.59■■■■■ 7.77
Gm35339A0A140LHH9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC63.58■■■■■ 7.77
Gm35339A0A140LHH9 Psd-208ENSMUST00000224556 2034 ntBASIC63.57■■■■■ 7.77
Gm35339A0A140LHH9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC63.55■■■■■ 7.76
Gm35339A0A140LHH9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC63.55■■■■■ 7.76
Gm35339A0A140LHH9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC63.54■■■■■ 7.76
Gm35339A0A140LHH9 Gm17082-201ENSMUST00000166043 1091 ntBASIC63.51■■■■■ 7.76
Gm35339A0A140LHH9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC63.44■■■■■ 7.75
Gm35339A0A140LHH9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC63.3■■■■■ 7.72
Gm35339A0A140LHH9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC63.23■■■■■ 7.71
Gm35339A0A140LHH9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC63.2■■■■■ 7.71
Gm35339A0A140LHH9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC63.16■■■■■ 7.7
Gm35339A0A140LHH9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC63.07■■■■■ 7.69
Gm35339A0A140LHH9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC62.94■■■■■ 7.67
Gm35339A0A140LHH9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC62.86■■■■■ 7.65
Gm35339A0A140LHH9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC62.82■■■■■ 7.65
Gm35339A0A140LHH9 Gm24804-201ENSMUST00000174982 85 ntBASIC62.78■■■■■ 7.64
Gm35339A0A140LHH9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC62.75■■■■■ 7.64
Gm35339A0A140LHH9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC62.72■■■■■ 7.63
Gm35339A0A140LHH9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC62.46■■■■■ 7.59
Gm35339A0A140LHH9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC62.46■■■■■ 7.59
Gm35339A0A140LHH9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC62.42■■■■■ 7.58
Gm35339A0A140LHH9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC62.36■■■■■ 7.57
Gm35339A0A140LHH9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC62.34■■■■■ 7.57
Gm35339A0A140LHH9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC62.3■■■■■ 7.56
Gm35339A0A140LHH9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC62.26■■■■■ 7.56
Gm35339A0A140LHH9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC62.25■■■■■ 7.56
Gm35339A0A140LHH9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC62.2■■■■■ 7.55
Gm35339A0A140LHH9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC62.17■■■■■ 7.54
Gm35339A0A140LHH9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC62.17■■■■■ 7.54
Gm35339A0A140LHH9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC62.09■■■■■ 7.53
Gm35339A0A140LHH9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC62.08■■■■■ 7.53
Gm35339A0A140LHH9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC62.03■■■■■ 7.52
Retrieved 100 of 76,532 protein–RNA pairs in 700.2 ms