RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TPP1Q03796 238 aa7.51□□□□□ -1.21
VPS28YPL065W GAS1P22146 559 aaKnown RBP7.5□□□□□ -1.21
VPS28YPL065W UTP5Q04177 643 aaKnown RBP7.5□□□□□ -1.21
VPS28YPL065W DAL4Q04895 635 aa7.5□□□□□ -1.21
VPS28YPL065W SEC20P28791 383 aa7.49□□□□□ -1.21
VPS28YPL065W HRK1Q08732 759 aaKnown RBP7.49□□□□□ -1.21
VPS28YPL065W RET1P22276 1149 aaKnown RBP7.48□□□□□ -1.21
VPS28YPL065W PTC7P38797 343 aa7.48□□□□□ -1.21
VPS28YPL065W ULP1Q02724 621 aa7.48□□□□□ -1.21
VPS28YPL065W YLR257WQ06146 321 aaKnown RBP7.48□□□□□ -1.21
VPS28YPL065W XKS1P42826 600 aa7.47□□□□□ -1.21
VPS28YPL065W WHI5Q12416 295 aa7.47□□□□□ -1.21
VPS28YPL065W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
VPS28YPL065W THI12P42883 340 aa7.46□□□□□ -1.22
VPS28YPL065W THI5P43534 340 aa7.46□□□□□ -1.22
VPS28YPL065W THI11P47183 340 aa7.46□□□□□ -1.22
VPS28YPL065W THI13Q07748 340 aa7.46□□□□□ -1.22
VPS28YPL065W LPX1Q12405 387 aaKnown RBP7.46□□□□□ -1.22
VPS28YPL065W MET4P32389 672 aa7.45□□□□□ -1.22
VPS28YPL065W PEX28P38848 579 aa7.45□□□□□ -1.22
VPS28YPL065W GTS1P40956 396 aa7.45□□□□□ -1.22
VPS28YPL065W DAK2P43550 591 aa7.45□□□□□ -1.22
VPS28YPL065W RKM2Q03942 479 aa7.45□□□□□ -1.22
VPS28YPL065W RSA3Q05942 220 aaKnown RBP7.45□□□□□ -1.22
VPS28YPL065W MDL2P33311 773 aa7.44□□□□□ -1.22
VPS28YPL065W YHL012WP38709 493 aa7.44□□□□□ -1.22
VPS28YPL065W FOL2P51601 243 aaKnown RBP7.44□□□□□ -1.22
VPS28YPL065W UGA4P32837 571 aa7.43□□□□□ -1.22
VPS28YPL065W VPS53P47061 822 aa7.43□□□□□ -1.22
VPS28YPL065W ADI1Q03677 179 aa7.43□□□□□ -1.22
VPS28YPL065W ADD66P36040 267 aa7.42□□□□□ -1.22
VPS28YPL065W YNR063WP53749 607 aa7.42□□□□□ -1.22
VPS28YPL065W CDA2Q06703 312 aa7.42□□□□□ -1.22
VPS28YPL065W TSA1P34760 196 aaKnown RBP7.41□□□□□ -1.22
VPS28YPL065W SAM35P14693 329 aa7.4□□□□□ -1.22
VPS28YPL065W SRO9P25567 434 aaKnown RBP7.4□□□□□ -1.22
VPS28YPL065W QNS1P38795 714 aaKnown RBP7.4□□□□□ -1.22
VPS28YPL065W YPL109CQ02981 657 aa7.4□□□□□ -1.22
VPS28YPL065W ATE1P16639 503 aa7.39□□□□□ -1.23
VPS28YPL065W RDH54P38086 958 aa7.39□□□□□ -1.23
VPS28YPL065W POL32P47110 350 aa7.39□□□□□ -1.23
VPS28YPL065W YGL140CP53120 1219 aa7.39□□□□□ -1.23
VPS28YPL065W NMD3P38861 518 aaKnown RBP7.38□□□□□ -1.23
VPS28YPL065W RRP15Q06511 250 aaPredicted RBP7.38□□□□□ -1.23
VPS28YPL065W NBA1Q08229 501 aaKnown RBP7.38□□□□□ -1.23
VPS28YPL065W RPT1P33299 467 aaKnown RBP7.37□□□□□ -1.23
VPS28YPL065W YJL045WP47052 634 aa7.37□□□□□ -1.23
VPS28YPL065W TAF13P11747 167 aa7.36□□□□□ -1.23
VPS28YPL065W SEC23P15303 768 aaKnown RBP7.36□□□□□ -1.23
VPS28YPL065W PRP6P19735 899 aaPredicted RBP7.36□□□□□ -1.23
VPS28YPL065W ENV11P53246 860 aa7.36□□□□□ -1.23
VPS28YPL065W MRPL22P53881 309 aa7.36□□□□□ -1.23
VPS28YPL065W EST2Q06163 884 aa7.36□□□□□ -1.23
VPS28YPL065W HXK1P04806 485 aaKnown RBP7.35□□□□□ -1.23
VPS28YPL065W SNU71P53207 620 aaKnown RBP7.35□□□□□ -1.23
VPS28YPL065W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
VPS28YPL065W ASF1P32447 279 aa7.34□□□□□ -1.23
VPS28YPL065W AIM26P32858 118 aa7.34□□□□□ -1.23
VPS28YPL065W YKL222CP35995 705 aa7.34□□□□□ -1.23
VPS28YPL065W FAA3P39002 694 aa7.34□□□□□ -1.23
VPS28YPL065W SNO2P53823 222 aa7.34□□□□□ -1.23
VPS28YPL065W TOS4Q06266 489 aa7.34□□□□□ -1.23
VPS28YPL065W ESC8Q08119 714 aa7.34□□□□□ -1.23
VPS28YPL065W COQ4O13525 335 aa7.33□□□□□ -1.24
VPS28YPL065W YCR015CP25616 317 aa7.33□□□□□ -1.24
VPS28YPL065W YSC84P32793 468 aa7.33□□□□□ -1.24
VPS28YPL065W MCD1Q12158 566 aa7.33□□□□□ -1.24
VPS28YPL065W ETP1P38748 585 aaKnown RBP7.32□□□□□ -1.24
VPS28YPL065W RIM8P53179 542 aa7.32□□□□□ -1.24
VPS28YPL065W YDL177CQ12257 170 aa7.32□□□□□ -1.24
VPS28YPL065W THI80P35202 319 aa7.31□□□□□ -1.24
VPS28YPL065W CCZ1P38273 704 aa7.31□□□□□ -1.24
VPS28YPL065W MRPS18P42847 217 aa7.31□□□□□ -1.24
VPS28YPL065W YGR122WP53272 402 aa7.31□□□□□ -1.24
VPS28YPL065W RSC58Q07979 502 aa7.31□□□□□ -1.24
VPS28YPL065W PTC5Q12511 572 aa7.31□□□□□ -1.24
VPS28YPL065W SPS1P08458 490 aa7.3□□□□□ -1.24
VPS28YPL065W HEM13P11353 328 aaKnown RBP7.3□□□□□ -1.24
VPS28YPL065W AIM3P38266 947 aaKnown RBP7.3□□□□□ -1.24
VPS28YPL065W PRE9P23638 258 aaKnown RBP7.29□□□□□ -1.24
VPS28YPL065W SEC8P32855 1065 aa7.29□□□□□ -1.24
VPS28YPL065W PIC2P40035 300 aa7.29□□□□□ -1.24
VPS28YPL065W SOD2P00447 233 aa7.28□□□□□ -1.24
VPS28YPL065W KIP1P28742 1111 aa7.28□□□□□ -1.24
VPS28YPL065W PAM1P37304 830 aaKnown RBP7.28□□□□□ -1.24
VPS28YPL065W MGE1P38523 228 aa7.28□□□□□ -1.24
VPS28YPL065W TNA1P53322 534 aa7.28□□□□□ -1.24
VPS28YPL065W YOR352WQ08816 343 aa7.28□□□□□ -1.24
VPS28YPL065W DED1P06634 604 aaKnown RBP7.27□□□□□ -1.25
VPS28YPL065W AFG2P32794 780 aa7.27□□□□□ -1.25
VPS28YPL065W ENT3P47160 408 aa7.27□□□□□ -1.25
VPS28YPL065W NOP7P53261 605 aaKnown RBP7.27□□□□□ -1.25
VPS28YPL065W HOS3Q02959 697 aaKnown RBP7.27□□□□□ -1.25
VPS28YPL065W OYE2Q03558 400 aaKnown RBP7.27□□□□□ -1.25
VPS28YPL065W YPL260WQ08977 551 aa7.27□□□□□ -1.25
VPS28YPL065W ALG3P38179 458 aa7.26□□□□□ -1.25
VPS28YPL065W YJR107WP47145 328 aa7.26□□□□□ -1.25
VPS28YPL065W RSB1Q08417 382 aa7.26□□□□□ -1.25
VPS28YPL065W GIP4P39732 760 aa7.25□□□□□ -1.25
VPS28YPL065W RPN3P40016 523 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms