RNA–Protein interactions for RNA: YPL021W

ECM23, Transcript of Non-essential protein of unconfirmed function, yeast

Gene ECM23, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM23	YPL021W	CUS1	Q02554	436 aa	Predicted RBP	5.72	□□□□□ -1.49
ECM23	YPL021W	RAT1	Q02792	1006 aa	Known RBP	5.72	□□□□□ -1.49
ECM23	YPL021W	YMR187C	Q03236	431 aa		5.72	□□□□□ -1.49
ECM23	YPL021W	RTT109	Q07794	436 aa		5.72	□□□□□ -1.49
ECM23	YPL021W	BMS1	Q08965	1183 aa	Known RBP	5.72	□□□□□ -1.49
ECM23	YPL021W	PMD1	P32634	1753 aa		5.72	□□□□□ -1.49
ECM23	YPL021W	APL2	P36000	726 aa	Predicted RBP	5.71	□□□□□ -1.5
ECM23	YPL021W	MCX1	P38323	520 aa	Predicted RBP	5.71	□□□□□ -1.5
ECM23	YPL021W	QDR2	P40474	542 aa		5.71	□□□□□ -1.5
ECM23	YPL021W	GYP7	P48365	746 aa		5.71	□□□□□ -1.5
ECM23	YPL021W	HEF3	P53978	1044 aa	Known RBP	5.71	□□□□□ -1.5
ECM23	YPL021W	ZDS2	P54786	942 aa		5.71	□□□□□ -1.5
ECM23	YPL021W	FAS2	P19097	1887 aa	Known RBP	5.71	□□□□□ -1.5
ECM23	YPL021W	SMY1	P32364	656 aa	Known RBP	5.7	□□□□□ -1.5
ECM23	YPL021W	PUF6	Q04373	656 aa	Known RBP	5.7	□□□□□ -1.5
ECM23	YPL021W	YDL144C	Q07589	356 aa		5.7	□□□□□ -1.5
ECM23	YPL021W	RPC31	P17890	251 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	SUV3	P32580	737 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	YBR287W	P38355	427 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	APM2	P38700	605 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	ERO1	Q03103	563 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	DIB1	Q06819	143 aa	Predicted RBP	5.69	□□□□□ -1.5
ECM23	YPL021W	BDF2	Q07442	638 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	YOL057W	Q08225	711 aa		5.69	□□□□□ -1.5
ECM23	YPL021W	DYS1	P38791	387 aa		5.68	□□□□□ -1.5
ECM23	YPL021W	PRK1	P40494	810 aa		5.68	□□□□□ -1.5
ECM23	YPL021W	HAT1	Q12341	374 aa		5.68	□□□□□ -1.5
ECM23	YPL021W	CAF20	P12962	161 aa	Known RBP	5.67	□□□□□ -1.5
ECM23	YPL021W	MRPL33	P20084	86 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	SKN7	P38889	622 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	CCT8	P47079	568 aa	Known RBP	5.67	□□□□□ -1.5
ECM23	YPL021W	YJR008W	P47085	338 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
ECM23	YPL021W	SQS1	P53866	767 aa	Known RBP	5.67	□□□□□ -1.5
ECM23	YPL021W	VPS64	Q03944	604 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	IRC3	Q06683	689 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	PUN1	Q06991	263 aa		5.67	□□□□□ -1.5
ECM23	YPL021W	SSK22	P25390	1331 aa	Predicted RBP	5.67	□□□□□ -1.5
ECM23	YPL021W	VMA3	P25515	160 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	ALG14	P38242	237 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	YBR197C	P38306	217 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	DNM1	P54861	757 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	UBP16	Q02863	499 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	SRT1	Q03175	343 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	SYF1	Q04048	859 aa	Predicted RBP	5.66	□□□□□ -1.5
ECM23	YPL021W	YDR306C	Q06640	478 aa		5.66	□□□□□ -1.5
ECM23	YPL021W	HKR1	P41809	1802 aa		5.65	□□□□□ -1.5
ECM23	YPL021W	RPP0	P05317	312 aa	Known RBP	5.65	□□□□□ -1.5
ECM23	YPL021W	SRS2	P12954	1174 aa		5.65	□□□□□ -1.5
ECM23	YPL021W	SUI2	P20459	304 aa	Known RBP	5.65	□□□□□ -1.5
ECM23	YPL021W	ICL1	P28240	557 aa	Predicted RBP	5.65	□□□□□ -1.5
ECM23	YPL021W	LDH1	P38139	375 aa		5.65	□□□□□ -1.5
ECM23	YPL021W	NHA1	Q99271	985 aa		5.65	□□□□□ -1.5
ECM23	YPL021W	SWI1	P09547	1314 aa		5.65	□□□□□ -1.51
ECM23	YPL021W	RPS9B	P05755	195 aa	Known RBP	5.64	□□□□□ -1.51
ECM23	YPL021W	FRD1	P32614	470 aa	Known RBP	5.64	□□□□□ -1.51
ECM23	YPL021W	ISC10	P32645	267 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	YKU70	P32807	602 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	PGM2	P37012	569 aa	Known RBP	5.64	□□□□□ -1.51
ECM23	YPL021W	SHC1	P39000	512 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	YNR040W	P53736	256 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	FCP1	Q03254	732 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	YOR296W	Q08748	1289 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	YDR215C	Q12240	137 aa		5.64	□□□□□ -1.51
ECM23	YPL021W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
ECM23	YPL021W	VPS27	P40343	622 aa	Known RBP	5.63	□□□□□ -1.51
ECM23	YPL021W	YML083C	Q04526	418 aa		5.63	□□□□□ -1.51
ECM23	YPL021W	RLF2	Q12495	606 aa		5.63	□□□□□ -1.51
ECM23	YPL021W	TOP1	P04786	769 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	MRP7	P12687	371 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	RET1	P22276	1149 aa	Known RBP	5.62	□□□□□ -1.51
ECM23	YPL021W	YCK2	P23292	546 aa	Known RBP	5.62	□□□□□ -1.51
ECM23	YPL021W	TAT1	P38085	619 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	GIP1	P38229	639 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	TPS3	P38426	1054 aa	Known RBP	5.62	□□□□□ -1.51
ECM23	YPL021W	PKH1	Q03407	766 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	GIS4	Q04233	774 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	NOB1	Q08444	459 aa	Known RBP	5.62	□□□□□ -1.51
ECM23	YPL021W	GRX6	Q12438	231 aa		5.62	□□□□□ -1.51
ECM23	YPL021W	IDI1	P15496	288 aa		5.61	□□□□□ -1.51
ECM23	YPL021W	NUP133	P36161	1157 aa		5.61	□□□□□ -1.51
ECM23	YPL021W	ITC1	P53125	1264 aa		5.61	□□□□□ -1.51
ECM23	YPL021W	SBP1	P10080	294 aa	Known RBP	5.6	□□□□□ -1.51
ECM23	YPL021W	NAR1	P23503	491 aa	Known RBP	5.6	□□□□□ -1.51
ECM23	YPL021W	RRN6	P32786	894 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	ISW1	P38144	1129 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	BSD2	P38356	321 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	SLN1	P39928	1220 aa	Predicted RBP	5.6	□□□□□ -1.51
ECM23	YPL021W	YGR122W	P53272	402 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	CWC15	Q03772	175 aa	Known RBP	5.6	□□□□□ -1.51
ECM23	YPL021W	RSC2	Q06488	889 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	CDC45	Q08032	650 aa		5.6	□□□□□ -1.51
ECM23	YPL021W	SAC3	P46674	1301 aa		5.59	□□□□□ -1.51
ECM23	YPL021W	YLR278C	Q05854	1341 aa		5.59	□□□□□ -1.51
ECM23	YPL021W	KRE2	P27809	442 aa		5.59	□□□□□ -1.51
ECM23	YPL021W	SWC3	P31376	625 aa		5.58	□□□□□ -1.52
ECM23	YPL021W	PRY1	P47032	299 aa		5.58	□□□□□ -1.52
ECM23	YPL021W	PNP1	Q05788	311 aa		5.58	□□□□□ -1.52
ECM23	YPL021W	RVB2	Q12464	471 aa	Known RBP	5.58	□□□□□ -1.52
ECM23	YPL021W	DUR1,2	P32528	1835 aa	Known RBP	5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 116.3 ms