RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W CTR1P49573 406 aa4.43□□□□□ -1.7
ROD1YOR018W YML083CQ04526 418 aa4.43□□□□□ -1.7
ROD1YOR018W GSC2P40989 1895 aa4.43□□□□□ -1.7
ROD1YOR018W MATALPHA2P0CY08 210 aa4.42□□□□□ -1.7
ROD1YOR018W HMLALPHA2P0CY09 210 aa4.42□□□□□ -1.7
ROD1YOR018W YBL028CP38202 106 aa4.42□□□□□ -1.7
ROD1YOR018W VMS1Q04311 632 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W YLR407WQ06070 228 aa4.42□□□□□ -1.7
ROD1YOR018W YDL124WQ07551 312 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W ACK1Q07622 623 aaPredicted RBP4.42□□□□□ -1.7
ROD1YOR018W LAP2Q10740 671 aa4.42□□□□□ -1.7
ROD1YOR018W HSP82P02829 709 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W SRP54P20424 541 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W SSA4P22202 642 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W MAK31P23059 88 aa4.42□□□□□ -1.7
ROD1YOR018W RDS1P25611 832 aa4.42□□□□□ -1.7
ROD1YOR018W PRX1P34227 261 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W RFC5P38251 354 aa4.42□□□□□ -1.7
ROD1YOR018W MSH4P40965 878 aaPredicted RBP4.42□□□□□ -1.7
ROD1YOR018W ENP2P48234 707 aaKnown RBP4.42□□□□□ -1.7
ROD1YOR018W YNL115CP53925 644 aa4.42□□□□□ -1.7
ROD1YOR018W SPP1Q03012 353 aa4.42□□□□□ -1.7
ROD1YOR018W GIS4Q04233 774 aa4.42□□□□□ -1.7
ROD1YOR018W SSF2Q12153 453 aaPredicted RBP4.42□□□□□ -1.7
ROD1YOR018W PMA1P05030 918 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W PDR1P12383 1068 aa4.41□□□□□ -1.7
ROD1YOR018W FRS2P15625 503 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W SEC2P17065 759 aa4.41□□□□□ -1.7
ROD1YOR018W SLY41P22215 453 aa4.41□□□□□ -1.7
ROD1YOR018W RAD53P22216 821 aa4.41□□□□□ -1.7
ROD1YOR018W VPS8P39702 1274 aa4.41□□□□□ -1.7
ROD1YOR018W SPO22P40511 975 aa4.41□□□□□ -1.7
ROD1YOR018W CIR1P42940 261 aa4.41□□□□□ -1.7
ROD1YOR018W STR2P47164 639 aa4.41□□□□□ -1.7
ROD1YOR018W NMA111P53920 997 aa4.41□□□□□ -1.7
ROD1YOR018W YNL035CP53962 389 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W RAD61Q99359 647 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-DR4O74302 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-HP0C2I4 478 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W TY1A-AP0CX57 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-PR1P0CX58 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-ORP0CX59 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-PR2P0CX60 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-DR5P0CX65 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-ER2P0CX66 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-GR3P0CX67 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-LR1P0CX68 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-MR2P0CX69 440 aa4.41□□□□□ -1.7
ROD1YOR018W BIK1P11709 440 aa4.41□□□□□ -1.7
ROD1YOR018W TRM1P15565 570 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W PFK2P16862 959 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
ROD1YOR018W SRM1P21827 482 aa4.41□□□□□ -1.7
ROD1YOR018W PRE8P23639 250 aa4.41□□□□□ -1.7
ROD1YOR018W SWI4P25302 1093 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W KNS1P32350 737 aaPredicted RBP4.41□□□□□ -1.7
ROD1YOR018W PEP12P32854 288 aa4.41□□□□□ -1.7
ROD1YOR018W DID4P36108 232 aa4.41□□□□□ -1.7
ROD1YOR018W MAL33P38157 468 aa4.41□□□□□ -1.7
ROD1YOR018W RPN10P38886 268 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W PCI8P40512 444 aa4.41□□□□□ -1.7
ROD1YOR018W EMP47P43555 445 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-JR2P47099 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-DR1Q03856 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-ML1Q04706 440 aaKnown RBP4.41□□□□□ -1.7
ROD1YOR018W APC11Q12157 165 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-BRQ12217 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-NL2Q12470 440 aa4.41□□□□□ -1.7
ROD1YOR018W TY1A-GR2Q12485 440 aa4.41□□□□□ -1.7
ROD1YOR018W KEX2P13134 814 aa4.4□□□□□ -1.7
ROD1YOR018W RAM1P22007 431 aa4.4□□□□□ -1.7
ROD1YOR018W MSP1P28737 362 aa4.4□□□□□ -1.7
ROD1YOR018W YKE2P52553 114 aa4.4□□□□□ -1.7
ROD1YOR018W SSL2Q00578 843 aa4.4□□□□□ -1.7
ROD1YOR018W TIM50Q02776 476 aa4.4□□□□□ -1.7
ROD1YOR018W VPS30Q02948 557 aa4.4□□□□□ -1.7
ROD1YOR018W MYO5Q04439 1219 aaKnown RBP4.4□□□□□ -1.7
ROD1YOR018W ISU2Q12056 156 aa4.4□□□□□ -1.7
ROD1YOR018W DCS2Q12123 353 aa4.4□□□□□ -1.7
ROD1YOR018W PSF3Q12146 194 aa4.4□□□□□ -1.7
ROD1YOR018W ROX1P25042 368 aa4.4□□□□□ -1.71
ROD1YOR018W MCM4P30665 933 aaKnown RBP4.4□□□□□ -1.71
ROD1YOR018W BUD6P41697 788 aa4.4□□□□□ -1.71
ROD1YOR018W RPT6Q01939 405 aaKnown RBP4.4□□□□□ -1.71
ROD1YOR018W CRF1Q04930 467 aa4.4□□□□□ -1.71
ROD1YOR018W MET6P05694 767 aaKnown RBP4.39□□□□□ -1.71
ROD1YOR018W FBP1P09201 348 aa4.39□□□□□ -1.71
ROD1YOR018W RPP1BP10622 106 aaKnown RBP4.39□□□□□ -1.71
ROD1YOR018W NUD1P32336 851 aa4.39□□□□□ -1.71
ROD1YOR018W VPS24P36095 224 aaKnown RBP4.39□□□□□ -1.71
ROD1YOR018W NIT1P40447 199 aa4.39□□□□□ -1.71
ROD1YOR018W ELG1Q12050 791 aa4.39□□□□□ -1.71
ROD1YOR018W LDB19Q12502 818 aa4.39□□□□□ -1.71
ROD1YOR018W YDR461C-AQ2V2P7 80 aa4.39□□□□□ -1.71
ROD1YOR018W RPL8BP29453 256 aaKnown RBP4.39□□□□□ -1.71
ROD1YOR018W LYS14P40971 790 aa4.39□□□□□ -1.71
ROD1YOR018W PEX21P50091 288 aa4.39□□□□□ -1.71
ROD1YOR018W TRS33Q99394 268 aa4.39□□□□□ -1.71
ROD1YOR018W ASE1P50275 885 aa4.38□□□□□ -1.71
ROD1YOR018W SKG3Q06315 1026 aa4.38□□□□□ -1.71
ROD1YOR018W PEX19Q07418 342 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms