RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W FMS1P50264 508 aa10.68□□□□□ -0.7
SMM1YNR015W RPL8AP17076 256 aaKnown RBP10.67□□□□□ -0.7
SMM1YNR015W RXT2P38255 430 aa10.67□□□□□ -0.7
SMM1YNR015W YHL017WP38745 532 aa10.67□□□□□ -0.7
SMM1YNR015W CTF18P49956 741 aa10.67□□□□□ -0.7
SMM1YNR015W DUS4Q06063 367 aa10.67□□□□□ -0.7
SMM1YNR015W VIP1Q06685 1146 aaKnown RBP10.67□□□□□ -0.7
SMM1YNR015W PSK2Q08217 1101 aa10.67□□□□□ -0.7
SMM1YNR015W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
SMM1YNR015W MYO1P08964 1928 aa10.66□□□□□ -0.7
SMM1YNR015W CIT1P00890 479 aa10.66□□□□□ -0.7
SMM1YNR015W PHR1P05066 565 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
SMM1YNR015W SHP1P34223 423 aa10.66□□□□□ -0.7
SMM1YNR015W RPN10P38886 268 aaKnown RBP10.66□□□□□ -0.7
SMM1YNR015W TPM2P40414 161 aa10.66□□□□□ -0.7
SMM1YNR015W YGR125WP53273 1036 aa10.66□□□□□ -0.7
SMM1YNR015W RPL19AP0CX82 189 aaKnown RBP10.65□□□□□ -0.7
SMM1YNR015W RPL19BP0CX83 189 aaPredicted RBP10.65□□□□□ -0.7
SMM1YNR015W CBP3P21560 335 aa10.65□□□□□ -0.7
SMM1YNR015W MCR1P36060 302 aaKnown RBP10.65□□□□□ -0.7
SMM1YNR015W CCT3P39077 534 aaKnown RBP10.65□□□□□ -0.7
SMM1YNR015W MXR1P40029 184 aa10.65□□□□□ -0.7
SMM1YNR015W GDE1Q02979 1223 aa10.65□□□□□ -0.7
SMM1YNR015W DUS3Q06053 668 aaKnown RBP10.65□□□□□ -0.7
SMM1YNR015W YLR326WQ06170 240 aaKnown RBP10.65□□□□□ -0.7
SMM1YNR015W GUD1Q07729 489 aa10.65□□□□□ -0.7
SMM1YNR015W SRP40P32583 406 aaPredicted RBP10.64□□□□□ -0.71
SMM1YNR015W UGA4P32837 571 aa10.64□□□□□ -0.71
SMM1YNR015W VPS29P38759 282 aa10.64□□□□□ -0.71
SMM1YNR015W PSF2P40359 213 aa10.64□□□□□ -0.71
SMM1YNR015W ENT3P47160 408 aa10.64□□□□□ -0.71
SMM1YNR015W YGL138CP53122 345 aa10.64□□□□□ -0.71
SMM1YNR015W LIF1P53150 421 aa10.64□□□□□ -0.71
SMM1YNR015W BUL2Q03758 920 aaKnown RBP10.64□□□□□ -0.71
SMM1YNR015W VPS20Q04272 221 aa10.64□□□□□ -0.71
SMM1YNR015W PRE10P21242 288 aaKnown RBP RIP-Chip data10.63□□□□□ -0.71not detected
SMM1YNR015W PWP2P25635 923 aaKnown RBP10.63□□□□□ -0.71
SMM1YNR015W PAN5P38787 379 aa10.63□□□□□ -0.71
SMM1YNR015W TGL3P40308 642 aa10.63□□□□□ -0.71
SMM1YNR015W BUD6P41697 788 aa10.63□□□□□ -0.71
SMM1YNR015W ELG1Q12050 791 aa10.63□□□□□ -0.71
SMM1YNR015W ERP3Q12403 225 aa10.63□□□□□ -0.71
SMM1YNR015W CDC6P09119 513 aa10.62□□□□□ -0.71
SMM1YNR015W VPS1P21576 704 aaKnown RBP10.62□□□□□ -0.71
SMM1YNR015W NPA3P47122 385 aa10.62□□□□□ -0.71
SMM1YNR015W SLD5Q03406 294 aa10.62□□□□□ -0.71
SMM1YNR015W GIS4Q04233 774 aa10.62□□□□□ -0.71
SMM1YNR015W ISA1Q07821 250 aaPredicted RBP10.62□□□□□ -0.71
SMM1YNR015W MET7Q08645 548 aa10.62□□□□□ -0.71
SMM1YNR015W MAK11P20484 414 aaKnown RBP10.61□□□□□ -0.71
SMM1YNR015W RGT1P32862 1170 aa10.61□□□□□ -0.71
SMM1YNR015W ULP1Q02724 621 aa10.61□□□□□ -0.71
SMM1YNR015W SMD2Q06217 110 aaKnown RBP10.61□□□□□ -0.71
SMM1YNR015W OXR1Q08952 273 aa10.61□□□□□ -0.71
SMM1YNR015W ICL2Q12031 575 aa10.61□□□□□ -0.71
SMM1YNR015W YPL150WQ12152 901 aa10.61□□□□□ -0.71
SMM1YNR015W TY1B-AO13527 1196 aaKnown RBP10.6□□□□□ -0.71
SMM1YNR015W HSP82P02829 709 aaKnown RBP10.6□□□□□ -0.71
SMM1YNR015W TKL1P23254 680 aaKnown RBP10.6□□□□□ -0.71
SMM1YNR015W TTI1P36097 1038 aa10.6□□□□□ -0.71
SMM1YNR015W CTR1P49573 406 aa10.6□□□□□ -0.71
SMM1YNR015W PTA1Q01329 785 aaPredicted RBP10.6□□□□□ -0.71
SMM1YNR015W CEX1Q12453 761 aa10.6□□□□□ -0.71
SMM1YNR015W RKM4Q12504 494 aa10.6□□□□□ -0.71
SMM1YNR015W CPA2P03965 1118 aaKnown RBP10.59□□□□□ -0.71
SMM1YNR015W SDH2P21801 266 aa10.59□□□□□ -0.71
SMM1YNR015W DBP7P36120 742 aaKnown RBP10.59□□□□□ -0.71
SMM1YNR015W REG2P38232 338 aa10.59□□□□□ -0.71
SMM1YNR015W RFC5P38251 354 aa10.59□□□□□ -0.71
SMM1YNR015W SUL1P38359 859 aa10.59□□□□□ -0.71
SMM1YNR015W MSC6Q08818 692 aaKnown RBP10.59□□□□□ -0.71
SMM1YNR015W ARP6Q12509 438 aa10.59□□□□□ -0.71
SMM1YNR015W PCT1P13259 424 aa10.58□□□□□ -0.72
SMM1YNR015W MCM4P30665 933 aaKnown RBP10.58□□□□□ -0.72
SMM1YNR015W ASF1P32447 279 aa10.58□□□□□ -0.72
SMM1YNR015W SEC8P32855 1065 aa10.58□□□□□ -0.72
SMM1YNR015W YGL039WP53183 348 aaKnown RBP10.58□□□□□ -0.72
SMM1YNR015W RET3P53600 189 aa10.58□□□□□ -0.72
SMM1YNR015W NAF1P53919 492 aaKnown RBP10.58□□□□□ -0.72
SMM1YNR015W DCS2Q12123 353 aa10.58□□□□□ -0.72
SMM1YNR015W YUR1P26725 428 aa10.57□□□□□ -0.72
SMM1YNR015W TFC4P33339 1025 aa10.57□□□□□ -0.72
SMM1YNR015W SCS3P53012 380 aa10.57□□□□□ -0.72
SMM1YNR015W BNI5P53890 448 aaKnown RBP10.57□□□□□ -0.72
SMM1YNR015W ORC4P54791 529 aa10.57□□□□□ -0.72
SMM1YNR015W WHI4Q07655 649 aaKnown RBP10.57□□□□□ -0.72
SMM1YNR015W SRO9P25567 434 aaKnown RBP10.56□□□□□ -0.72
SMM1YNR015W PAH1P32567 862 aa10.56□□□□□ -0.72
SMM1YNR015W MAL33P38157 468 aa10.56□□□□□ -0.72
SMM1YNR015W BRE5P53741 515 aaKnown RBP10.56□□□□□ -0.72
SMM1YNR015W CSM3Q04659 317 aa10.56□□□□□ -0.72
SMM1YNR015W YMR321CQ04898 105 aa10.56□□□□□ -0.72
SMM1YNR015W GET3Q12154 354 aaKnown RBP10.56□□□□□ -0.72
SMM1YNR015W SUT2Q12286 268 aa10.56□□□□□ -0.72
SMM1YNR015W YDR461C-AQ2V2P7 80 aa10.56□□□□□ -0.72
SMM1YNR015W SAS3P34218 831 aa10.55□□□□□ -0.72
SMM1YNR015W PRX1P34227 261 aaKnown RBP10.55□□□□□ -0.72
SMM1YNR015W PAM1P37304 830 aaKnown RBP10.55□□□□□ -0.72
SMM1YNR015W AIM21P40563 679 aa10.55□□□□□ -0.72
SMM1YNR015W CIT3P43635 486 aa10.55□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms