RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C MEF2P39677 819 aa1.21□□□□□ -2.22
NIP1YMR309C RVS167P39743 482 aaKnown RBP1.21□□□□□ -2.22
NIP1YMR309C SLI1P53304 468 aa1.21□□□□□ -2.22
NIP1YMR309C CDC55Q00362 526 aa1.21□□□□□ -2.22
NIP1YMR309C NOG1Q02892 647 aaKnown RBP1.21□□□□□ -2.22
NIP1YMR309C GCN5Q03330 439 aa1.21□□□□□ -2.22
NIP1YMR309C BSC2Q05611 235 aa1.21□□□□□ -2.22
NIP1YMR309C RSA3Q05942 220 aaKnown RBP1.21□□□□□ -2.22
NIP1YMR309C GLO3P38682 493 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C HSE1P38753 452 aa1.2□□□□□ -2.22
NIP1YMR309C LAM1P38851 1228 aa1.2□□□□□ -2.22
NIP1YMR309C ACF4P47129 309 aa1.2□□□□□ -2.22
NIP1YMR309C MSE1P48525 536 aa1.2□□□□□ -2.22
NIP1YMR309C HNT2P49775 206 aa1.2□□□□□ -2.22
NIP1YMR309C SGD1Q06132 899 aa1.2□□□□□ -2.22
NIP1YMR309C SUB2Q07478 446 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C RSC58Q07979 502 aa1.2□□□□□ -2.22
NIP1YMR309C STE11P23561 717 aa1.2□□□□□ -2.22
NIP1YMR309C MCM5P29496 775 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C AIM26P32858 118 aa1.2□□□□□ -2.22
NIP1YMR309C QDR1P40475 563 aa1.2□□□□□ -2.22
NIP1YMR309C MTR4P47047 1073 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C SPT20P50875 604 aa1.2□□□□□ -2.22
NIP1YMR309C ATG1P53104 897 aa1.2□□□□□ -2.22
NIP1YMR309C UTP5Q04177 643 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C TRS120Q04183 1289 aa1.2□□□□□ -2.22
NIP1YMR309C DUS4Q06063 367 aa1.2□□□□□ -2.22
NIP1YMR309C URN1Q06525 465 aaKnown RBP1.2□□□□□ -2.22
NIP1YMR309C SPS1P08458 490 aa1.19□□□□□ -2.22
NIP1YMR309C YSC84P32793 468 aa1.19□□□□□ -2.22
NIP1YMR309C CTF4Q01454 927 aa1.19□□□□□ -2.22
NIP1YMR309C LAP2Q10740 671 aa1.19□□□□□ -2.22
NIP1YMR309C VMA4P22203 233 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C RAD53P22216 821 aa1.19□□□□□ -2.22
NIP1YMR309C PUF4P25339 888 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22 RIP-Chip
NIP1YMR309C HCM1P25364 564 aa1.19□□□□□ -2.22
NIP1YMR309C PMI40P29952 429 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C BAP2P38084 609 aa1.19□□□□□ -2.22
NIP1YMR309C QNS1P38795 714 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C CHS7P38843 316 aa1.19□□□□□ -2.22
NIP1YMR309C NMD3P38861 518 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C YJL045WP47052 634 aa1.19□□□□□ -2.22
NIP1YMR309C MNN10P50108 393 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C RKM2Q03942 479 aa1.19□□□□□ -2.22
NIP1YMR309C INP54Q08227 384 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C NBA1Q08229 501 aaKnown RBP1.19□□□□□ -2.22
NIP1YMR309C YOR352WQ08816 343 aa1.19□□□□□ -2.22
NIP1YMR309C SSA1P10591 642 aaKnown RBP1.18□□□□□ -2.22
NIP1YMR309C CDC20P26309 610 aa1.18□□□□□ -2.22
NIP1YMR309C GRS1P38088 690 aaKnown RBP1.18□□□□□ -2.22
NIP1YMR309C SEC26P41810 973 aaKnown RBP1.18□□□□□ -2.22
NIP1YMR309C XKS1P42826 600 aa1.18□□□□□ -2.22
NIP1YMR309C VPS53P47061 822 aa1.18□□□□□ -2.22
NIP1YMR309C MON1P53129 644 aa1.18□□□□□ -2.22
NIP1YMR309C SUN4P53616 420 aa1.18□□□□□ -2.22
NIP1YMR309C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
NIP1YMR309C NTO1Q12311 748 aa1.18□□□□□ -2.22
NIP1YMR309C COQ4O13525 335 aa1.18□□□□□ -2.22
NIP1YMR309C CYC1P00044 109 aaPredicted RBP1.18□□□□□ -2.22
NIP1YMR309C LST4P34239 828 aa1.18□□□□□ -2.22
NIP1YMR309C ATG14P38270 344 aa1.18□□□□□ -2.22
NIP1YMR309C PLB2Q03674 706 aa1.18□□□□□ -2.22
NIP1YMR309C YCS4Q06156 1176 aa1.18□□□□□ -2.22
NIP1YMR309C ACK1Q07622 623 aaPredicted RBP1.18□□□□□ -2.22
NIP1YMR309C RCL1Q08096 367 aaPredicted RBP1.18□□□□□ -2.22
NIP1YMR309C PMA1P05030 918 aaKnown RBP1.17□□□□□ -2.22
NIP1YMR309C SCP160P06105 1222 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22 RIP-Chip
NIP1YMR309C CDC6P09119 513 aa1.17□□□□□ -2.22
NIP1YMR309C MSH3P25336 1018 aa1.17□□□□□ -2.22
NIP1YMR309C CDC3P32457 520 aaKnown RBP1.17□□□□□ -2.22
NIP1YMR309C RDH54P38086 958 aa1.17□□□□□ -2.22
NIP1YMR309C CCZ1P38273 704 aa1.17□□□□□ -2.22
NIP1YMR309C PIK1P39104 1066 aa1.17□□□□□ -2.22
NIP1YMR309C AIM21P40563 679 aa1.17□□□□□ -2.22
NIP1YMR309C SAM37P50110 327 aa1.17□□□□□ -2.22
NIP1YMR309C NOC3Q07896 663 aaPredicted RBP1.17□□□□□ -2.22
NIP1YMR309C TRL1P09880 827 aaKnown RBP1.17□□□□□ -2.22
NIP1YMR309C SNF5P18480 905 aa1.17□□□□□ -2.22
NIP1YMR309C DCG1P32460 244 aa1.17□□□□□ -2.22
NIP1YMR309C RPN3P40016 523 aaKnown RBP1.17□□□□□ -2.22
NIP1YMR309C MCM6P53091 1017 aaKnown RBP1.17□□□□□ -2.22
NIP1YMR309C TNA1P53322 534 aa1.17□□□□□ -2.22
NIP1YMR309C ROT1Q03691 256 aa1.17□□□□□ -2.22
NIP1YMR309C RXT3Q07458 294 aa1.17□□□□□ -2.22
NIP1YMR309C SRM1P21827 482 aa1.16□□□□□ -2.22
NIP1YMR309C DEF1P35732 738 aaKnown RBP1.16□□□□□ -2.22
NIP1YMR309C ADD66P36040 267 aa1.16□□□□□ -2.22
NIP1YMR309C GEF1P37020 779 aa1.16□□□□□ -2.22
NIP1YMR309C VPS62P53285 467 aa1.16□□□□□ -2.22
NIP1YMR309C LGE1Q02796 332 aaKnown RBP1.16□□□□□ -2.22
NIP1YMR309C HOS3Q02959 697 aaKnown RBP1.16□□□□□ -2.22
NIP1YMR309C TMA10Q06177 86 aa1.16□□□□□ -2.22
NIP1YMR309C GPI13Q07830 1017 aa1.16□□□□□ -2.22
NIP1YMR309C GPB1Q08886 897 aa1.16□□□□□ -2.22
NIP1YMR309C HAT1Q12341 374 aa1.16□□□□□ -2.22
NIP1YMR309C YBL113CQ7M4S9 792 aa1.16□□□□□ -2.22
NIP1YMR309C GAL10P04397 699 aa1.16□□□□□ -2.22
NIP1YMR309C KIP1P28742 1111 aa1.16□□□□□ -2.22
NIP1YMR309C AFG2P32794 780 aa1.16□□□□□ -2.22
NIP1YMR309C CIC1P38779 376 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms