RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C FPR4Q06205 392 aaPredicted RBP4□□□□□ -1.77
SHH3YMR118C AOS1Q06624 347 aa4□□□□□ -1.77
SHH3YMR118C YDR215CQ12240 137 aa4□□□□□ -1.77
SHH3YMR118C RPS31P05759 152 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C RNA1P11745 407 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C PDC5P16467 563 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C ATE1P16639 503 aa3.99□□□□□ -1.77
SHH3YMR118C TPM1P17536 199 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C MNR2P35724 969 aa3.99□□□□□ -1.77
SHH3YMR118C TTI1P36097 1038 aa3.99□□□□□ -1.77
SHH3YMR118C TAT1P38085 619 aa3.99□□□□□ -1.77
SHH3YMR118C RIX1P38883 763 aaPredicted RBP3.99□□□□□ -1.77
SHH3YMR118C YGR122WP53272 402 aa3.99□□□□□ -1.77
SHH3YMR118C YNR029CP53729 429 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C NSE3Q05541 303 aa3.99□□□□□ -1.77
SHH3YMR118C MCA1Q08601 432 aa3.99□□□□□ -1.77
SHH3YMR118C NOP14Q99207 810 aaKnown RBP3.99□□□□□ -1.77
SHH3YMR118C MRP7P12687 371 aa3.98□□□□□ -1.77
SHH3YMR118C FRS2P15625 503 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C CLB1P24868 471 aa3.98□□□□□ -1.77
SHH3YMR118C SWC3P31376 625 aa3.98□□□□□ -1.77
SHH3YMR118C DEP1P31385 405 aa3.98□□□□□ -1.77
SHH3YMR118C HSP104P31539 908 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C AAP1P37898 856 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C ECM21P38167 1117 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C AIM9P40053 627 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C RNT1Q02555 471 aa3.98□□□□□ -1.77
SHH3YMR118C TY1A-DR2Q03964 440 aaKnown RBP3.98□□□□□ -1.77
SHH3YMR118C SGD1Q06132 899 aa3.98□□□□□ -1.77
SHH3YMR118C YPQ2Q06328 317 aa3.98□□□□□ -1.77
SHH3YMR118C YOL057WQ08225 711 aa3.98□□□□□ -1.77
SHH3YMR118C RIM20Q12033 661 aa3.98□□□□□ -1.77
SHH3YMR118C NCB2Q92317 146 aa3.98□□□□□ -1.77
SHH3YMR118C TRS33Q99394 268 aa3.98□□□□□ -1.77
SHH3YMR118C PDR18P53756 1333 aa3.97□□□□□ -1.77
SHH3YMR118C MRC1P25588 1096 aa3.97□□□□□ -1.77
SHH3YMR118C SPO22P40511 975 aa3.97□□□□□ -1.77
SHH3YMR118C CTF4Q01454 927 aa3.97□□□□□ -1.77
SHH3YMR118C RMD1Q03441 430 aa3.97□□□□□ -1.77
SHH3YMR118C BRE1Q07457 700 aaKnown RBP3.97□□□□□ -1.77
SHH3YMR118C CPA2P03965 1118 aaKnown RBP3.96□□□□□ -1.78
SHH3YMR118C LEU1P07264 779 aaKnown RBP3.96□□□□□ -1.78
SHH3YMR118C PET111P08468 800 aa3.96□□□□□ -1.78
SHH3YMR118C RAD4P14736 754 aa3.96□□□□□ -1.78
SHH3YMR118C MBR1P23493 339 aa3.96□□□□□ -1.78
SHH3YMR118C YTA6P40328 754 aa3.96□□□□□ -1.78
SHH3YMR118C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SHH3YMR118C PRP31P49704 494 aaPredicted RBP3.96□□□□□ -1.78
SHH3YMR118C CTF18P49956 741 aa3.96□□□□□ -1.78
SHH3YMR118C MRS2Q01926 470 aa3.96□□□□□ -1.78
SHH3YMR118C YDR306CQ06640 478 aa3.96□□□□□ -1.78
SHH3YMR118C DDP1Q99321 188 aaKnown RBP3.96□□□□□ -1.78
SHH3YMR118C GLT1Q12680 2145 aaKnown RBP3.95□□□□□ -1.78
SHH3YMR118C RPP1AP05318 106 aaPredicted RBP3.95□□□□□ -1.78
SHH3YMR118C RPS6AP0CX37 236 aaKnown RBP3.95□□□□□ -1.78
SHH3YMR118C RPS6BP0CX38 236 aaPredicted RBP3.95□□□□□ -1.78
SHH3YMR118C KCC4P25389 1037 aa3.95□□□□□ -1.78
SHH3YMR118C SPC110P32380 944 aa3.95□□□□□ -1.78
SHH3YMR118C RRM3P38766 723 aa3.95□□□□□ -1.78
SHH3YMR118C SSF1P38789 453 aaPredicted RBP3.95□□□□□ -1.78
SHH3YMR118C DSN1P40568 576 aa3.95□□□□□ -1.78
SHH3YMR118C YFL034WP43564 1073 aa3.95□□□□□ -1.78
SHH3YMR118C PRY1P47032 299 aa3.95□□□□□ -1.78
SHH3YMR118C CTH1P47976 325 aa3.95□□□□□ -1.78
SHH3YMR118C RIM21P48565 533 aa3.95□□□□□ -1.78
SHH3YMR118C MRPS35P53292 345 aa3.95□□□□□ -1.78
SHH3YMR118C YNL165WP53891 406 aa3.95□□□□□ -1.78
SHH3YMR118C ARP5P53946 755 aa3.95□□□□□ -1.78
SHH3YMR118C PSK2Q08217 1101 aa3.95□□□□□ -1.78
SHH3YMR118C ELG1Q12050 791 aa3.95□□□□□ -1.78
SHH3YMR118C YPL150WQ12152 901 aa3.95□□□□□ -1.78
SHH3YMR118C APC1P53886 1748 aa3.95□□□□□ -1.78
SHH3YMR118C GPA1P08539 472 aa3.94□□□□□ -1.78
SHH3YMR118C RGP1P16664 663 aa3.94□□□□□ -1.78
SHH3YMR118C RDS2P19541 446 aaKnown RBP3.94□□□□□ -1.78
SHH3YMR118C RDS1P25611 832 aa3.94□□□□□ -1.78
SHH3YMR118C NUP133P36161 1157 aa3.94□□□□□ -1.78
SHH3YMR118C MED8P38304 223 aa3.94□□□□□ -1.78
SHH3YMR118C MSC7P38694 644 aa3.94□□□□□ -1.78
SHH3YMR118C ECM1P39715 212 aa3.94□□□□□ -1.78
SHH3YMR118C YER130CP39959 443 aa3.94□□□□□ -1.78
SHH3YMR118C TFG2P41896 400 aaPredicted RBP3.94□□□□□ -1.78
SHH3YMR118C YJL007CP47080 104 aa3.94□□□□□ -1.78
SHH3YMR118C ENT3P47160 408 aa3.94□□□□□ -1.78
SHH3YMR118C ALD2P47771 506 aa3.94□□□□□ -1.78
SHH3YMR118C YPT11P48559 417 aa3.94□□□□□ -1.78
SHH3YMR118C MLC1P53141 149 aa3.94□□□□□ -1.78
SHH3YMR118C COG4Q06096 861 aa3.94□□□□□ -1.78
SHH3YMR118C GIN4Q12263 1142 aa3.94□□□□□ -1.78
SHH3YMR118C YRF1-2P40105 1681 aa3.94□□□□□ -1.78
SHH3YMR118C PET123P17558 318 aa3.93□□□□□ -1.78
SHH3YMR118C MAL33P38157 468 aa3.93□□□□□ -1.78
SHH3YMR118C YHL017WP38745 532 aa3.93□□□□□ -1.78
SHH3YMR118C RTT107P38850 1070 aa3.93□□□□□ -1.78
SHH3YMR118C VPS41P38959 992 aa3.93□□□□□ -1.78
SHH3YMR118C STM1P39015 273 aaKnown RBP3.93□□□□□ -1.78
SHH3YMR118C VID28P40547 921 aa3.93□□□□□ -1.78
SHH3YMR118C OSW7P43611 510 aa3.93□□□□□ -1.78
SHH3YMR118C YGL140CP53120 1219 aa3.93□□□□□ -1.78
SHH3YMR118C YGL082WP53155 381 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms