RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C RKM2Q03942 479 aa7.19□□□□□ -1.26
CTF18YMR078C YLR225CQ05948 407 aaKnown RBP7.19□□□□□ -1.26
CTF18YMR078C YPL066WQ12194 479 aa7.19□□□□□ -1.26
CTF18YMR078C SYP1P25623 870 aaKnown RBP7.18□□□□□ -1.26
CTF18YMR078C SRP40P32583 406 aaPredicted RBP7.18□□□□□ -1.26
CTF18YMR078C MOT2P34909 587 aaKnown RBP7.18□□□□□ -1.26
CTF18YMR078C MAE1P36013 669 aaKnown RBP7.18□□□□□ -1.26
CTF18YMR078C RRM3P38766 723 aa7.18□□□□□ -1.26
CTF18YMR078C KIP3P53086 805 aaKnown RBP7.18□□□□□ -1.26
CTF18YMR078C YNR063WP53749 607 aa7.18□□□□□ -1.26
CTF18YMR078C AGP1P25376 633 aa7.17□□□□□ -1.26
CTF18YMR078C DSE4P53753 1117 aa7.17□□□□□ -1.26
CTF18YMR078C FPR4Q06205 392 aaPredicted RBP7.17□□□□□ -1.26
CTF18YMR078C YFL066CP43538 392 aa7.17□□□□□ -1.26
CTF18YMR078C YGR045CP53229 120 aa7.17□□□□□ -1.26
CTF18YMR078C FAR11P53917 953 aa7.17□□□□□ -1.26
CTF18YMR078C YMR074CQ04773 145 aa7.17□□□□□ -1.26
CTF18YMR078C AOS1Q06624 347 aa7.17□□□□□ -1.26
CTF18YMR078C GAS5Q08193 484 aa7.17□□□□□ -1.26
CTF18YMR078C TY1A-NL1Q12391 440 aaKnown RBP7.17□□□□□ -1.26
CTF18YMR078C RAD4P14736 754 aa7.16□□□□□ -1.26
CTF18YMR078C HUL5P53119 910 aa7.16□□□□□ -1.26
CTF18YMR078C DBP5P20449 482 aaKnown RBP7.16□□□□□ -1.26
CTF18YMR078C ALG3P38179 458 aa7.16□□□□□ -1.26
CTF18YMR078C YAR028WP39548 234 aa7.16□□□□□ -1.26
CTF18YMR078C BOI2P39969 1040 aa7.16□□□□□ -1.26
CTF18YMR078C BUD6P41697 788 aa7.16□□□□□ -1.26
CTF18YMR078C CNN1P43618 361 aa7.16□□□□□ -1.26
CTF18YMR078C NCE103P53615 221 aa7.16□□□□□ -1.26
CTF18YMR078C RPN4Q03465 531 aa7.16□□□□□ -1.26
CTF18YMR078C CDC53Q12018 815 aaKnown RBP7.16□□□□□ -1.26
CTF18YMR078C INO1P11986 533 aa7.15□□□□□ -1.26
CTF18YMR078C STI1P15705 589 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
CTF18YMR078C YKL091CP33324 310 aaKnown RBP7.15□□□□□ -1.26
CTF18YMR078C VBA5P36172 582 aa7.15□□□□□ -1.26
CTF18YMR078C YHR020WP38708 688 aaKnown RBP7.15□□□□□ -1.26
CTF18YMR078C NAN1Q02931 896 aaKnown RBP7.15□□□□□ -1.26
CTF18YMR078C SPO20Q04359 397 aa7.15□□□□□ -1.26
CTF18YMR078C CIT2P08679 460 aa7.15□□□□□ -1.27
CTF18YMR078C TRK2P28584 889 aa7.15□□□□□ -1.27
CTF18YMR078C MPH1P40562 993 aa7.15□□□□□ -1.27
CTF18YMR078C YBR184WP38299 523 aa7.14□□□□□ -1.27
CTF18YMR078C SHE9Q04172 456 aa7.14□□□□□ -1.27
CTF18YMR078C AI1P03875 834 aa7.13□□□□□ -1.27
CTF18YMR078C PUF4P25339 888 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
CTF18YMR078C SBA1P28707 216 aaKnown RBP7.13□□□□□ -1.27
CTF18YMR078C YNR014WP53719 212 aa7.13□□□□□ -1.27
CTF18YMR078C ELA1P53861 379 aaPredicted RBP7.13□□□□□ -1.27
CTF18YMR078C YOR223WQ12015 292 aa7.13□□□□□ -1.27
CTF18YMR078C YLL054CQ12244 843 aa7.13□□□□□ -1.27
CTF18YMR078C BUD9P53226 547 aa7.13□□□□□ -1.27
CTF18YMR078C PPM2Q08282 695 aa7.13□□□□□ -1.27
CTF18YMR078C PBP2P38151 413 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
CTF18YMR078C PFD1P46988 109 aa7.12□□□□□ -1.27
CTF18YMR078C DOT1Q04089 582 aaKnown RBP7.12□□□□□ -1.27
CTF18YMR078C AVO1Q08236 1176 aa7.12□□□□□ -1.27
CTF18YMR078C PTC5Q12511 572 aa7.12□□□□□ -1.27
CTF18YMR078C TIM54P47045 478 aa7.11□□□□□ -1.27
CTF18YMR078C TDA6Q06466 467 aa7.11□□□□□ -1.27
CTF18YMR078C MLS1P30952 554 aa7.11□□□□□ -1.27
CTF18YMR078C YGL176CP46945 554 aa7.11□□□□□ -1.27
CTF18YMR078C YPL062WQ02781 134 aa7.11□□□□□ -1.27
CTF18YMR078C RSA3Q05942 220 aaKnown RBP7.11□□□□□ -1.27
CTF18YMR078C RKM4Q12504 494 aa7.11□□□□□ -1.27
CTF18YMR078C THI72Q08579 599 aa7.1□□□□□ -1.27
CTF18YMR078C MDJ1P35191 511 aa7.09□□□□□ -1.27
CTF18YMR078C GPT2P36148 743 aa7.09□□□□□ -1.27
CTF18YMR078C MCM7P38132 845 aa7.09□□□□□ -1.27
CTF18YMR078C ATG14P38270 344 aa7.09□□□□□ -1.27
CTF18YMR078C QNS1P38795 714 aaKnown RBP7.09□□□□□ -1.27
CTF18YMR078C MSH4P40965 878 aaPredicted RBP7.09□□□□□ -1.27
CTF18YMR078C LAP2Q10740 671 aa7.09□□□□□ -1.27
CTF18YMR078C MRP8P35719 219 aa7.09□□□□□ -1.27
CTF18YMR078C MCX1P38323 520 aaPredicted RBP7.09□□□□□ -1.27
CTF18YMR078C RGD1P38339 666 aa7.09□□□□□ -1.27
CTF18YMR078C MBP1P39678 833 aa7.09□□□□□ -1.27
CTF18YMR078C SIP5P40210 489 aaKnown RBP7.09□□□□□ -1.27
CTF18YMR078C IRR1P40541 1150 aa7.09□□□□□ -1.27
CTF18YMR078C RNH70P53331 553 aa7.09□□□□□ -1.27
CTF18YMR078C FMP25Q08023 583 aa7.09□□□□□ -1.27
CTF18YMR078C RET1P22276 1149 aaKnown RBP7.08□□□□□ -1.28
CTF18YMR078C RPL8BP29453 256 aaKnown RBP7.08□□□□□ -1.28
CTF18YMR078C SFA1P32771 386 aa7.08□□□□□ -1.28
CTF18YMR078C YKL107WP34251 309 aa7.08□□□□□ -1.28
CTF18YMR078C FLC1Q08967 793 aa7.08□□□□□ -1.28
CTF18YMR078C AI3P03877 415 aa7.08□□□□□ -1.28
CTF18YMR078C VPS53P47061 822 aa7.08□□□□□ -1.28
CTF18YMR078C NMD3P38861 518 aaKnown RBP7.07□□□□□ -1.28
CTF18YMR078C HNT2P49775 206 aa7.07□□□□□ -1.28
CTF18YMR078C SBP1P10080 294 aaKnown RBP7.07□□□□□ -1.28
CTF18YMR078C PRY1P47032 299 aa7.07□□□□□ -1.28
CTF18YMR078C YLR257WQ06146 321 aaKnown RBP7.07□□□□□ -1.28
CTF18YMR078C YER152CP10356 443 aa7.06□□□□□ -1.28
CTF18YMR078C KIP1P28742 1111 aa7.06□□□□□ -1.28
CTF18YMR078C SMY2P32909 740 aaKnown RBP7.06□□□□□ -1.28
CTF18YMR078C PIN4P34217 668 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
CTF18YMR078C YCK2P23292 546 aaKnown RBP7.05□□□□□ -1.28
CTF18YMR078C PBY1P38254 753 aa7.05□□□□□ -1.28
CTF18YMR078C GNT1Q12096 491 aa7.05□□□□□ -1.28
CTF18YMR078C YOR131CQ12486 218 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms