RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C GCR1P07261 785 aa6.22□□□□□ -1.41
SMD3YLR147C NFS1P25374 497 aa6.22□□□□□ -1.41
SMD3YLR147C PEP7P32609 515 aa6.22□□□□□ -1.41
SMD3YLR147C SMY2P32909 740 aaKnown RBP6.22□□□□□ -1.41
SMD3YLR147C NNK1P36003 928 aa6.22□□□□□ -1.41
SMD3YLR147C MMM1P41800 426 aa6.22□□□□□ -1.41
SMD3YLR147C EST2Q06163 884 aa6.22□□□□□ -1.41
SMD3YLR147C HDA2Q06629 674 aa6.22□□□□□ -1.41
SMD3YLR147C TAF13P11747 167 aa6.21□□□□□ -1.42
SMD3YLR147C AFG2P32794 780 aa6.21□□□□□ -1.42
SMD3YLR147C RKM2Q03942 479 aa6.21□□□□□ -1.42
SMD3YLR147C MED7Q08278 222 aa6.21□□□□□ -1.42
SMD3YLR147C RET1P22276 1149 aaKnown RBP6.2□□□□□ -1.42
SMD3YLR147C HXT13P39924 564 aa6.2□□□□□ -1.42
SMD3YLR147C INP52P50942 1183 aa6.2□□□□□ -1.42
SMD3YLR147C HXT17P53631 564 aa6.2□□□□□ -1.42
SMD3YLR147C YNR063WP53749 607 aa6.2□□□□□ -1.42
SMD3YLR147C HXT15P54854 567 aa6.2□□□□□ -1.42
SMD3YLR147C CYC7P00045 113 aa6.19□□□□□ -1.42
SMD3YLR147C CIT3P43635 486 aa6.19□□□□□ -1.42
SMD3YLR147C RSA3Q05942 220 aaKnown RBP6.19□□□□□ -1.42
SMD3YLR147C YLR257WQ06146 321 aaKnown RBP6.19□□□□□ -1.42
SMD3YLR147C GCD1P09032 578 aaPredicted RBP6.18□□□□□ -1.42
SMD3YLR147C CTH1P47976 325 aa6.18□□□□□ -1.42
SMD3YLR147C SIW14P53965 281 aa6.18□□□□□ -1.42
SMD3YLR147C RCM1P53972 490 aa6.18□□□□□ -1.42
SMD3YLR147C ROD1Q02805 837 aa6.18□□□□□ -1.42
SMD3YLR147C LAP2Q10740 671 aa6.18□□□□□ -1.42
SMD3YLR147C YVC1Q12324 675 aa6.18□□□□□ -1.42
SMD3YLR147C OMA1P36163 345 aa6.17□□□□□ -1.42
SMD3YLR147C ATG14P38270 344 aa6.17□□□□□ -1.42
SMD3YLR147C TOS1P38288 455 aa6.17□□□□□ -1.42
SMD3YLR147C QNS1P38795 714 aaKnown RBP6.17□□□□□ -1.42
SMD3YLR147C NMD3P38861 518 aaKnown RBP6.17□□□□□ -1.42
SMD3YLR147C OYE3P41816 400 aaPredicted RBP6.17□□□□□ -1.42
SMD3YLR147C MRL1Q06815 381 aa6.17□□□□□ -1.42
SMD3YLR147C YOR059CQ08448 450 aaKnown RBP6.17□□□□□ -1.42
SMD3YLR147C PUS7Q08647 676 aaKnown RBP6.17□□□□□ -1.42
SMD3YLR147C DED1P06634 604 aaKnown RBP6.16□□□□□ -1.42
SMD3YLR147C PUB1P32588 453 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SMD3YLR147C DUT1P33317 147 aa6.16□□□□□ -1.42
SMD3YLR147C HSE1P38753 452 aa6.16□□□□□ -1.42
SMD3YLR147C ENT3P47160 408 aa6.16□□□□□ -1.42
SMD3YLR147C MKK2P32491 506 aa6.15□□□□□ -1.42
SMD3YLR147C RAT1Q02792 1006 aaKnown RBP6.15□□□□□ -1.42
SMD3YLR147C TPP1Q03796 238 aa6.15□□□□□ -1.42
SMD3YLR147C MAG2Q06436 670 aaKnown RBP6.15□□□□□ -1.42
SMD3YLR147C RTT10Q08924 1013 aa6.15□□□□□ -1.42
SMD3YLR147C SEA4P38164 1038 aa6.14□□□□□ -1.43
SMD3YLR147C PEX7P39108 375 aa6.14□□□□□ -1.43
SMD3YLR147C VPS53P47061 822 aa6.14□□□□□ -1.43
SMD3YLR147C PET112P33893 541 aa6.13□□□□□ -1.43
SMD3YLR147C ALG3P38179 458 aa6.13□□□□□ -1.43
SMD3YLR147C SDH1Q00711 640 aa6.13□□□□□ -1.43
SMD3YLR147C BRE4Q07660 1125 aa6.13□□□□□ -1.43
SMD3YLR147C PTC5Q12511 572 aa6.13□□□□□ -1.43
SMD3YLR147C CDC34P14682 295 aa6.12□□□□□ -1.43
SMD3YLR147C MAC1P35192 417 aa6.12□□□□□ -1.43
SMD3YLR147C RER2P35196 286 aa6.12□□□□□ -1.43
SMD3YLR147C MNR2P35724 969 aa6.12□□□□□ -1.43
SMD3YLR147C YJL045WP47052 634 aa6.12□□□□□ -1.43
SMD3YLR147C SNU71P53207 620 aaKnown RBP6.12□□□□□ -1.43
SMD3YLR147C TRE1Q08919 783 aa6.12□□□□□ -1.43
SMD3YLR147C SAM35P14693 329 aa6.11□□□□□ -1.43
SMD3YLR147C KIP1P28742 1111 aa6.11□□□□□ -1.43
SMD3YLR147C HRK1Q08732 759 aaKnown RBP6.11□□□□□ -1.43
SMD3YLR147C SYP1P25623 870 aaKnown RBP6.1□□□□□ -1.43
SMD3YLR147C RAD27P26793 382 aa6.1□□□□□ -1.43
SMD3YLR147C SVF1Q05515 481 aa6.1□□□□□ -1.43
SMD3YLR147C TMA46Q12000 345 aaKnown RBP6.1□□□□□ -1.43
SMD3YLR147C NSI1Q12457 570 aa6.1□□□□□ -1.43
SMD3YLR147C LIP5P32875 414 aa6.09□□□□□ -1.43
SMD3YLR147C PAM1P37304 830 aaKnown RBP6.09□□□□□ -1.43
SMD3YLR147C MET10P39692 1035 aa6.09□□□□□ -1.43
SMD3YLR147C NRD1P53617 575 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
SMD3YLR147C EEB1Q02891 456 aa6.09□□□□□ -1.43
SMD3YLR147C SSY1Q03770 852 aa6.09□□□□□ -1.43
SMD3YLR147C DBP5P20449 482 aaKnown RBP6.08□□□□□ -1.44
SMD3YLR147C YSC84P32793 468 aa6.08□□□□□ -1.44
SMD3YLR147C GPB2P39717 880 aa6.08□□□□□ -1.44
SMD3YLR147C CNN1P43618 361 aa6.08□□□□□ -1.44
SMD3YLR147C YHL012WP38709 493 aa6.07□□□□□ -1.44
SMD3YLR147C MPH1P40562 993 aa6.07□□□□□ -1.44
SMD3YLR147C TIF35Q04067 274 aaKnown RBP6.07□□□□□ -1.44
SMD3YLR147C YPL260WQ08977 551 aa6.07□□□□□ -1.44
SMD3YLR147C ADP1P25371 1049 aa6.06□□□□□ -1.44
SMD3YLR147C MLS1P30952 554 aa6.06□□□□□ -1.44
SMD3YLR147C PRO1P32264 428 aa6.06□□□□□ -1.44
SMD3YLR147C RGD1P38339 666 aa6.06□□□□□ -1.44
SMD3YLR147C PTC7P38797 343 aa6.06□□□□□ -1.44
SMD3YLR147C YGR053CP53234 283 aa6.06□□□□□ -1.44
SMD3YLR147C VPS16Q03308 798 aa6.06□□□□□ -1.44
SMD3YLR147C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
SMD3YLR147C JIP5Q06214 492 aaPredicted RBP6.06□□□□□ -1.44
SMD3YLR147C RCL1Q08096 367 aaPredicted RBP6.06□□□□□ -1.44
SMD3YLR147C PIN2Q12057 282 aa6.06□□□□□ -1.44
SMD3YLR147C LPX1Q12405 387 aaKnown RBP6.06□□□□□ -1.44
SMD3YLR147C SPO21Q12411 609 aa6.06□□□□□ -1.44
SMD3YLR147C SRO9P25567 434 aaKnown RBP6.05□□□□□ -1.44
SMD3YLR147C LYP1P32487 611 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms