RNA–Protein interactions for RNA: YLR103C

CDC45, Transcript of DNA replication initiation factor, yeast

Gene CDC45, Length 1,953 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC45	YLR103C	TOS4	Q06266	489 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	FRA1	Q07825	749 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	SSF2	Q12153	453 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC45	YLR103C	MCM16	Q12262	181 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	GRX6	Q12438	231 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	CTT1	P06115	562 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	BIK1	P11709	440 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	ROX1	P25042	368 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	MSP1	P28737	362 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CDC45	YLR103C	BOI1	P38041	980 aa	Known RBP	4.25	□□□□□ -1.73
CDC45	YLR103C	GSM1	P42950	618 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	IOC3	P43596	787 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	ENT3	P47160	408 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	CTF18	P49956	741 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	PPM2	Q08282	695 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	PSF3	Q12146	194 aa		4.25	□□□□□ -1.73
CDC45	YLR103C	CLC1	P17891	233 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	COQ1	P18900	473 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	ICL1	P28240	557 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC45	YLR103C	YKU70	P32807	602 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	SIS2	P36024	562 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	GEF1	P37020	779 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	SLN1	P39928	1220 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC45	YLR103C	KIN4	Q01919	800 aa		4.24	□□□□□ -1.73
CDC45	YLR103C	SPN1	Q06505	410 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC45	YLR103C	CRG1	P38892	291 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
CDC45	YLR103C	YER156C	P40093	338 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	YKE2	P52553	114 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	COG8	Q04632	607 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	HRQ1	Q05549	1077 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	WRS1	Q12109	432 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	ENO1	P00924	437 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	TOP1	P04786	769 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	CHO2	P05374	869 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	TEC1	P18412	486 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	FBP26	P32604	452 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	RTG2	P32608	588 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	RER2	P35196	286 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	TTI1	P36097	1038 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	ARL1	P38116	183 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	BDH2	P39713	417 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	PIP2	P52960	996 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	PEX14	P53112	341 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	HST1	P53685	503 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	UFD2	P54860	961 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	PRP42	Q03776	544 aa	Known RBP	4.23	□□□□□ -1.73
CDC45	YLR103C	EST2	Q06163	884 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	GAS5	Q08193	484 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	GSC2	P40989	1895 aa		4.23	□□□□□ -1.73
CDC45	YLR103C	ARG82	P07250	355 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	MATALPHA2	P0CY08	210 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	HMLALPHA2	P0CY09	210 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	SNF3	P10870	884 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	PEP12	P32854	288 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	PRX1	P34227	261 aa	Known RBP	4.22	□□□□□ -1.73
CDC45	YLR103C	ASH1	P34233	588 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	RPS15	Q01855	142 aa	Known RBP	4.22	□□□□□ -1.73
CDC45	YLR103C	MRD1	Q06106	887 aa	Known RBP	4.22	□□□□□ -1.73
CDC45	YLR103C	PSK2	Q08217	1101 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	CPA2	P03965	1118 aa	Known RBP	4.22	□□□□□ -1.73
CDC45	YLR103C	RPS7A	P26786	190 aa	Known RBP	4.22	□□□□□ -1.73
CDC45	YLR103C	YHL017W	P38745	532 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	RTS1	P38903	757 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	EPL1	P43572	832 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	ELG1	Q12050	791 aa		4.22	□□□□□ -1.73
CDC45	YLR103C	FLO1	P32768	1537 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	BUD6	P41697	788 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	CIR1	P42940	261 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	NSG2	P53898	299 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	HDA1	P53973	706 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	ECM23	Q02710	187 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	YPL260W	Q08977	551 aa		4.21	□□□□□ -1.74
CDC45	YLR103C	RRG1	Q12167	365 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC45	YLR103C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CDC45	YLR103C	HCA4	P20448	770 aa	Known RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	AFT1	P22149	690 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	ISF1	P32488	338 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	ANP1	P32629	500 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	AFG2	P32794	780 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	RFC5	P38251	354 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	YHL050C	P38721	697 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	HYR1	P40581	163 aa	Known RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	EMP47	P43555	445 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	PTK2	P47116	818 aa	Known RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	PEX19	Q07418	342 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	ACK1	Q07622	623 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	FLO11	P08640	1367 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	RIT1	P23796	513 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	RDS1	P25611	832 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	GUT2	P32191	649 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	SHC1	P39000	512 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	AKR1	P39010	764 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	VID27	P40157	782 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	RSM25	P40496	264 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	RPL34B	P40525	121 aa	Known RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	SEN54	Q02825	467 aa	Predicted RBP	4.2	□□□□□ -1.74
CDC45	YLR103C	YLR407W	Q06070	228 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	TFC6	Q06339	672 aa		4.2	□□□□□ -1.74
CDC45	YLR103C	KEL3	Q08979	651 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms