RNA–Protein interactions for RNA: YLR085C

ARP6, Transcript of Actin-related protein that binds nucleosomes, yeast

Gene ARP6, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARP6	YLR085C	YKT6	P36015	200 aa	Known RBP	11.29	□□□□□ -0.6
ARP6	YLR085C	RRM3	P38766	723 aa		11.29	□□□□□ -0.6
ARP6	YLR085C	SOL3	P38858	249 aa		11.29	□□□□□ -0.6
ARP6	YLR085C	SHC1	P39000	512 aa		11.29	□□□□□ -0.6
ARP6	YLR085C	GIS4	Q04233	774 aa		11.29	□□□□□ -0.6
ARP6	YLR085C	CIT1	P00890	479 aa		11.28	□□□□□ -0.6
ARP6	YLR085C	SES1	P07284	462 aa	Known RBP	11.28	□□□□□ -0.6
ARP6	YLR085C	MSM1	P22438	575 aa		11.28	□□□□□ -0.6
ARP6	YLR085C	MCM2	P29469	868 aa		11.28	□□□□□ -0.6
ARP6	YLR085C	NOC2	P39744	710 aa	Known RBP	11.28	□□□□□ -0.6
ARP6	YLR085C	CRF1	Q04930	467 aa		11.28	□□□□□ -0.6
ARP6	YLR085C	EIS1	Q05050	843 aa	Known RBP	11.28	□□□□□ -0.6
ARP6	YLR085C	PCL8	Q08966	492 aa		11.28	□□□□□ -0.6
ARP6	YLR085C	MCM4	P30665	933 aa	Known RBP	11.27	□□□□□ -0.61
ARP6	YLR085C	FAR11	P53917	953 aa		11.27	□□□□□ -0.61
ARP6	YLR085C	TRM44	Q02648	567 aa	Known RBP	11.27	□□□□□ -0.61
ARP6	YLR085C	CEX1	Q12453	761 aa		11.27	□□□□□ -0.61
ARP6	YLR085C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
ARP6	YLR085C	PRE8	P23639	250 aa		11.26	□□□□□ -0.61
ARP6	YLR085C	URA1	P28272	314 aa	Predicted RBP	11.26	□□□□□ -0.61
ARP6	YLR085C	ASF1	P32447	279 aa		11.26	□□□□□ -0.61
ARP6	YLR085C	FYV10	P40492	516 aa		11.26	□□□□□ -0.61
ARP6	YLR085C	NAF1	P53919	492 aa	Known RBP	11.26	□□□□□ -0.61
ARP6	YLR085C	VPS30	Q02948	557 aa		11.26	□□□□□ -0.61
ARP6	YLR085C	SMD2	Q06217	110 aa	Known RBP	11.26	□□□□□ -0.61
ARP6	YLR085C	YDL124W	Q07551	312 aa	Known RBP	11.26	□□□□□ -0.61
ARP6	YLR085C	SRM1	P21827	482 aa		11.25	□□□□□ -0.61
ARP6	YLR085C	SRP40	P32583	406 aa	Predicted RBP	11.25	□□□□□ -0.61
ARP6	YLR085C	SAC6	P32599	642 aa	Known RBP	11.25	□□□□□ -0.61
ARP6	YLR085C	YBL028C	P38202	106 aa		11.25	□□□□□ -0.61
ARP6	YLR085C	PRE3	P38624	215 aa		11.25	□□□□□ -0.61
ARP6	YLR085C	FOL1	P53848	824 aa		11.25	□□□□□ -0.61
ARP6	YLR085C	CLF1	Q12309	687 aa	Predicted RBP	11.25	□□□□□ -0.61
ARP6	YLR085C	GSY2	P27472	705 aa		11.24	□□□□□ -0.61
ARP6	YLR085C	CHS3	P29465	1165 aa		11.24	□□□□□ -0.61
ARP6	YLR085C	PEX29	Q03370	554 aa		11.24	□□□□□ -0.61
ARP6	YLR085C	ATG20	Q07528	640 aa		11.24	□□□□□ -0.61
ARP6	YLR085C	ADP1	P25371	1049 aa		11.23	□□□□□ -0.61
ARP6	YLR085C	VPS4	P52917	437 aa		11.23	□□□□□ -0.61
ARP6	YLR085C	SQS1	P53866	767 aa	Known RBP	11.23	□□□□□ -0.61
ARP6	YLR085C	MDM1	Q01846	1127 aa		11.23	□□□□□ -0.61
ARP6	YLR085C	YOR296W	Q08748	1289 aa		11.23	□□□□□ -0.61
ARP6	YLR085C	RPS9B	P05755	195 aa	Known RBP	11.22	□□□□□ -0.61
ARP6	YLR085C	NUC1	P08466	329 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	MNN4	P36044	1178 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	STV1	P37296	890 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	TOM71	P38825	639 aa	Known RBP	11.22	□□□□□ -0.61
ARP6	YLR085C	YGL138C	P53122	345 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	MMR1	Q06324	491 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	TIP41	Q12199	356 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	PTC5	Q12511	572 aa		11.22	□□□□□ -0.61
ARP6	YLR085C	PMA1	P05030	918 aa	Known RBP	11.21	□□□□□ -0.61
ARP6	YLR085C	SRP54	P20424	541 aa	Known RBP	11.21	□□□□□ -0.61
ARP6	YLR085C	CDC15	P27636	974 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	CST26	P38226	397 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	MTC3	P53077	123 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	CUE3	P53137	624 aa	Known RBP	11.21	□□□□□ -0.61
ARP6	YLR085C	RTC4	P53850	401 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	ELP4	Q02884	456 aa	Known RBP	11.21	□□□□□ -0.61
ARP6	YLR085C	PSR2	Q07949	397 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	DSE3	Q08729	430 aa		11.21	□□□□□ -0.61
ARP6	YLR085C	GSC2	P40989	1895 aa		11.21	□□□□□ -0.62
ARP6	YLR085C	GAP1	P19145	602 aa	Predicted RBP	11.2	□□□□□ -0.62
ARP6	YLR085C	EBP2	P36049	427 aa	Known RBP	11.2	□□□□□ -0.62
ARP6	YLR085C	VPS45	P38932	577 aa		11.2	□□□□□ -0.62
ARP6	YLR085C	TIM50	Q02776	476 aa		11.2	□□□□□ -0.62
ARP6	YLR085C	TRS120	Q04183	1289 aa		11.2	□□□□□ -0.62
ARP6	YLR085C	AIM7	Q12156	149 aa		11.2	□□□□□ -0.62
ARP6	YLR085C	CYC8	P14922	966 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	SAM2	P19358	384 aa	Known RBP	11.19	□□□□□ -0.62
ARP6	YLR085C	BMH1	P29311	267 aa	Known RBP	11.19	□□□□□ -0.62
ARP6	YLR085C	SAS3	P34218	831 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	MPE1	P35728	441 aa	Known RBP	11.19	□□□□□ -0.62
ARP6	YLR085C	SLI15	P38283	698 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	CTR9	P89105	1077 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	SKG3	Q06315	1026 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	LAP2	Q10740	671 aa		11.19	□□□□□ -0.62
ARP6	YLR085C	HIS4	P00815	799 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	TUF1	P02992	437 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	KIN1	P13185	1064 aa		11.18	□□□□□ -0.62
ARP6	YLR085C	THR4	P16120	514 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	HPR1	P17629	752 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	MFT1	P33441	392 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	CCT3	P39077	534 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	PES4	P39684	611 aa		11.18	□□□□□ -0.62
ARP6	YLR085C	UTP7	P40055	554 aa	Known RBP	11.18	□□□□□ -0.62
ARP6	YLR085C	MID1	P41821	548 aa		11.18	□□□□□ -0.62
ARP6	YLR085C	WAR1	Q03631	944 aa		11.18	□□□□□ -0.62
ARP6	YLR085C	CBP1	P07252	654 aa		11.17	□□□□□ -0.62
ARP6	YLR085C	ALG1	P16661	449 aa		11.17	□□□□□ -0.62
ARP6	YLR085C	MCM3	P24279	971 aa	Known RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	STT3	P39007	718 aa	Known RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	TPM2	P40414	161 aa		11.17	□□□□□ -0.62
ARP6	YLR085C	TFG2	P41896	400 aa	Predicted RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	ASE1	P50275	885 aa		11.17	□□□□□ -0.62
ARP6	YLR085C	SNU71	P53207	620 aa	Known RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	SDA1	P53313	767 aa	Known RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	DSE4	P53753	1117 aa		11.17	□□□□□ -0.62
ARP6	YLR085C	BNI5	P53890	448 aa	Known RBP	11.17	□□□□□ -0.62
ARP6	YLR085C	CSM3	Q04659	317 aa		11.17	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms