RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	PGI1	P12709	554 aa	Known RBP	13.26	□□□□□ -0.29
TCD2	YKL027W	TY3A-G	Q12173	290 aa		13.26	□□□□□ -0.29
TCD2	YKL027W	TY3A-I	Q99219	290 aa		13.26	□□□□□ -0.29
TCD2	YKL027W	CDC6	P09119	513 aa		13.25	□□□□□ -0.29
TCD2	YKL027W	PKC1	P24583	1151 aa		13.25	□□□□□ -0.29
TCD2	YKL027W	RRD1	P40454	393 aa	Known RBP	13.25	□□□□□ -0.29
TCD2	YKL027W	ASE1	P50275	885 aa		13.25	□□□□□ -0.29
TCD2	YKL027W	CSC1	Q06538	782 aa		13.25	□□□□□ -0.29
TCD2	YKL027W	TGL1	P34163	548 aa		13.24	□□□□□ -0.29
TCD2	YKL027W	SAS3	P34218	831 aa		13.24	□□□□□ -0.29
TCD2	YKL027W	MAL33	P38157	468 aa		13.24	□□□□□ -0.29
TCD2	YKL027W	BDH2	P39713	417 aa		13.24	□□□□□ -0.29
TCD2	YKL027W	FMS1	P50264	508 aa		13.24	□□□□□ -0.29
TCD2	YKL027W	PIL1	P53252	339 aa	Known RBP	13.24	□□□□□ -0.29
TCD2	YKL027W	EUG1	P32474	517 aa		13.23	□□□□□ -0.29
TCD2	YKL027W	HST1	P53685	503 aa		13.23	□□□□□ -0.29
TCD2	YKL027W	GIS4	Q04233	774 aa		13.23	□□□□□ -0.29
TCD2	YKL027W	TMA64	Q04600	565 aa	Known RBP	13.23	□□□□□ -0.29
TCD2	YKL027W	SPH1	Q06160	661 aa		13.23	□□□□□ -0.29
TCD2	YKL027W	GET3	Q12154	354 aa	Known RBP	13.23	□□□□□ -0.29
TCD2	YKL027W	CDC19	P00549	500 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	SAM1	P10659	382 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	VPS1	P21576	704 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	PAN5	P38787	379 aa		13.22	□□□□□ -0.29
TCD2	YKL027W	HYR1	P40581	163 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	RET3	P53600	189 aa		13.22	□□□□□ -0.29
TCD2	YKL027W	BNI5	P53890	448 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	YLR225C	Q05948	407 aa	Known RBP	13.22	□□□□□ -0.29
TCD2	YKL027W	GUD1	Q07729	489 aa		13.22	□□□□□ -0.29
TCD2	YKL027W	DCS2	Q12123	353 aa		13.22	□□□□□ -0.29
TCD2	YKL027W	IME2	P32581	645 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	UTR4	P32626	227 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	LIF1	P53150	421 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	YGL081W	P53156	320 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	SMD2	Q06217	110 aa	Known RBP	13.21	□□□□□ -0.29
TCD2	YKL027W	TIP41	Q12199	356 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	NBL1	Q3E7Y6	73 aa		13.21	□□□□□ -0.29
TCD2	YKL027W	SRO9	P25567	434 aa	Known RBP	13.2	□□□□□ -0.3
TCD2	YKL027W	RDS1	P25611	832 aa		13.2	□□□□□ -0.3
TCD2	YKL027W	YGR125W	P53273	1036 aa		13.2	□□□□□ -0.3
TCD2	YKL027W	SGD1	Q06132	899 aa		13.2	□□□□□ -0.3
TCD2	YKL027W	TY1B-A	O13527	1196 aa	Known RBP	13.19	□□□□□ -0.3
TCD2	YKL027W	UGA4	P32837	571 aa		13.19	□□□□□ -0.3
TCD2	YKL027W	NDT80	P38830	627 aa		13.19	□□□□□ -0.3
TCD2	YKL027W	ATG1	P53104	897 aa		13.19	□□□□□ -0.3
TCD2	YKL027W	CSM3	Q04659	317 aa		13.19	□□□□□ -0.3
TCD2	YKL027W	THR4	P16120	514 aa	Known RBP	13.18	□□□□□ -0.3
TCD2	YKL027W	MCR1	P36060	302 aa	Known RBP	13.18	□□□□□ -0.3
TCD2	YKL027W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.17	□□□□□ -0.3	not detected
TCD2	YKL027W	SUL1	P38359	859 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	NCS6	P53088	359 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	DSE4	P53753	1117 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	RTC4	P53850	401 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	PEX19	Q07418	342 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	YOR296W	Q08748	1289 aa		13.17	□□□□□ -0.3
TCD2	YKL027W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.17	□□□□□ -0.3	not detected
TCD2	YKL027W	SES1	P07284	462 aa	Known RBP	13.16	□□□□□ -0.3
TCD2	YKL027W	DUS3	Q06053	668 aa	Known RBP	13.16	□□□□□ -0.3
TCD2	YKL027W	OXR1	Q08952	273 aa		13.16	□□□□□ -0.3
TCD2	YKL027W	HXK1	P04806	485 aa	Known RBP	13.15	□□□□□ -0.3
TCD2	YKL027W	ALG1	P16661	449 aa		13.15	□□□□□ -0.3
TCD2	YKL027W	SHP1	P34223	423 aa		13.15	□□□□□ -0.3
TCD2	YKL027W	STT3	P39007	718 aa	Known RBP	13.15	□□□□□ -0.3
TCD2	YKL027W	OYE2	Q03558	400 aa	Known RBP	13.15	□□□□□ -0.3
TCD2	YKL027W	TRS120	Q04183	1289 aa		13.15	□□□□□ -0.3
TCD2	YKL027W	ISA1	Q07821	250 aa	Predicted RBP	13.15	□□□□□ -0.3
TCD2	YKL027W	SLK19	Q08581	821 aa	Known RBP	13.15	□□□□□ -0.3
TCD2	YKL027W	RKM4	Q12504	494 aa		13.15	□□□□□ -0.3
TCD2	YKL027W	RGP1	P16664	663 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	MBR1	P23493	339 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	ELM1	P32801	640 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	DJP1	P40564	432 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	CIT3	P43635	486 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	HAP5	Q02516	242 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	COG8	Q04632	607 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	ARP6	Q12509	438 aa		13.14	□□□□□ -0.31
TCD2	YKL027W	KEX1	P09620	729 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	SRP40	P32583	406 aa	Predicted RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	RFT1	P38206	574 aa	Predicted RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	VPS29	P38759	282 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	MXR1	P40029	184 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	EAF7	P53911	425 aa	Known RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	PTA1	Q01329	785 aa	Predicted RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	EIS1	Q05050	843 aa	Known RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	DUS4	Q06063	367 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	MCM3	P24279	971 aa	Known RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	SEC8	P32855	1065 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	MFM1	Q02783	413 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	YLR326W	Q06170	240 aa	Known RBP	13.13	□□□□□ -0.31
TCD2	YKL027W	ERP3	Q12403	225 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	PTC5	Q12511	572 aa		13.13	□□□□□ -0.31
TCD2	YKL027W	TKL1	P23254	680 aa	Known RBP	13.12	□□□□□ -0.31
TCD2	YKL027W	URA1	P28272	314 aa	Predicted RBP	13.12	□□□□□ -0.31
TCD2	YKL027W	MSP1	P28737	362 aa		13.12	□□□□□ -0.31
TCD2	YKL027W	RGT1	P32862	1170 aa		13.12	□□□□□ -0.31
TCD2	YKL027W	ISW1	P38144	1129 aa		13.12	□□□□□ -0.31
TCD2	YKL027W	YGR273C	P53329	174 aa		13.12	□□□□□ -0.31
TCD2	YKL027W	ORC4	P54791	529 aa		13.12	□□□□□ -0.31
TCD2	YKL027W	BUL2	Q03758	920 aa	Known RBP	13.12	□□□□□ -0.31
TCD2	YKL027W	AIM33	Q04516	312 aa		13.12	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 89 ms