RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W VPS53P47061 822 aa2.24□□□□□ -2.05
MDS3YGL197W UTP22P53254 1237 aaPredicted RBP2.24□□□□□ -2.05
MDS3YGL197W CDC55Q00362 526 aa2.24□□□□□ -2.05
MDS3YGL197W FOX2Q02207 900 aaKnown RBP2.24□□□□□ -2.05
MDS3YGL197W YMR074CQ04773 145 aa2.24□□□□□ -2.05
MDS3YGL197W IML1P47170 1584 aa2.24□□□□□ -2.05
MDS3YGL197W TED1P40533 473 aa2.24□□□□□ -2.05
MDS3YGL197W SNO2P53823 222 aa2.24□□□□□ -2.05
MDS3YGL197W RCM1P53972 490 aa2.24□□□□□ -2.05
MDS3YGL197W MDS3P53094 1487 aa2.24□□□□□ -2.05
MDS3YGL197W THS1P04801 734 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W SUV3P32580 737 aa2.23□□□□□ -2.05
MDS3YGL197W YOR352WQ08816 343 aa2.23□□□□□ -2.05
MDS3YGL197W PUP1P25043 261 aa2.23□□□□□ -2.05
MDS3YGL197W YKR073CP36153 106 aa2.23□□□□□ -2.05
MDS3YGL197W AVT1P47082 602 aa2.23□□□□□ -2.05
MDS3YGL197W YNL011CP53980 444 aa2.23□□□□□ -2.05
MDS3YGL197W HAS1Q03532 505 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W EMG1Q06287 252 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W AVO1Q08236 1176 aa2.23□□□□□ -2.05
MDS3YGL197W TRM732Q03496 1420 aa2.23□□□□□ -2.05
MDS3YGL197W VPS35P34110 944 aa2.23□□□□□ -2.05
MDS3YGL197W YJR124CP47159 448 aa2.23□□□□□ -2.05
MDS3YGL197W ALO1P54783 526 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W DOT1Q04089 582 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W DFG16Q99234 619 aa2.23□□□□□ -2.05
MDS3YGL197W RIM11P38615 370 aa2.23□□□□□ -2.05
MDS3YGL197W RPN3P40016 523 aaKnown RBP2.23□□□□□ -2.05
MDS3YGL197W HDA2Q06629 674 aa2.23□□□□□ -2.05
MDS3YGL197W COQ4O13525 335 aa2.22□□□□□ -2.05
MDS3YGL197W CCZ1P38273 704 aa2.22□□□□□ -2.05
MDS3YGL197W RGD2P43556 714 aa2.22□□□□□ -2.05
MDS3YGL197W ALT1P52893 592 aa2.22□□□□□ -2.05
MDS3YGL197W APC1P53886 1748 aa2.22□□□□□ -2.05
MDS3YGL197W SSA1P10591 642 aaKnown RBP2.22□□□□□ -2.05
MDS3YGL197W VMA4P22203 233 aaKnown RBP2.22□□□□□ -2.05
MDS3YGL197W BSD2P38356 321 aa2.22□□□□□ -2.05
MDS3YGL197W BSC2Q05611 235 aa2.22□□□□□ -2.05
MDS3YGL197W PDR15Q04182 1529 aaKnown RBP2.22□□□□□ -2.05
MDS3YGL197W SEC20P28791 383 aa2.22□□□□□ -2.05
MDS3YGL197W CDC3P32457 520 aaKnown RBP2.22□□□□□ -2.05
MDS3YGL197W TRS120Q04183 1289 aa2.22□□□□□ -2.05
MDS3YGL197W SOD2P00447 233 aa2.21□□□□□ -2.06
MDS3YGL197W PRP6P19735 899 aaPredicted RBP2.21□□□□□ -2.06
MDS3YGL197W YCR015CP25616 317 aa2.21□□□□□ -2.06
MDS3YGL197W PYC2P32327 1180 aaKnown RBP2.21□□□□□ -2.06
MDS3YGL197W AKR1P39010 764 aa2.21□□□□□ -2.06
MDS3YGL197W PBP1P53297 722 aaKnown RBP2.21□□□□□ -2.06
MDS3YGL197W MCA1Q08601 432 aa2.21□□□□□ -2.06
MDS3YGL197W HTS1P07263 546 aaKnown RBP2.21□□□□□ -2.06
MDS3YGL197W SLD2P34252 453 aa2.21□□□□□ -2.06
MDS3YGL197W IOC3P43596 787 aa2.21□□□□□ -2.06
MDS3YGL197W OXR1Q08952 273 aa2.21□□□□□ -2.06
MDS3YGL197W TIF6Q12522 245 aaKnown RBP2.21□□□□□ -2.06
MDS3YGL197W YLR358CO13565 187 aa2.21□□□□□ -2.06
MDS3YGL197W STE11P23561 717 aa2.21□□□□□ -2.06
MDS3YGL197W STM1P39015 273 aaKnown RBP2.21□□□□□ -2.06
MDS3YGL197W BUD4P47136 1447 aa2.2□□□□□ -2.06
MDS3YGL197W REI1P38344 393 aaPredicted RBP2.2□□□□□ -2.06
MDS3YGL197W NOG1Q02892 647 aaKnown RBP2.2□□□□□ -2.06
MDS3YGL197W TRE1Q08919 783 aa2.2□□□□□ -2.06
MDS3YGL197W RPS4AP0CX35 261 aaKnown RBP2.2□□□□□ -2.06
MDS3YGL197W RPS4BP0CX36 261 aaKnown RBP2.2□□□□□ -2.06
MDS3YGL197W DOM34P33309 386 aa2.2□□□□□ -2.06
MDS3YGL197W YNR065CP53751 1116 aa2.2□□□□□ -2.06
MDS3YGL197W KAR5Q04746 504 aa2.2□□□□□ -2.06
MDS3YGL197W FLP1P03870 423 aa2.2□□□□□ -2.06
MDS3YGL197W CPS1P27614 576 aa2.2□□□□□ -2.06
MDS3YGL197W ASF1P32447 279 aa2.2□□□□□ -2.06
MDS3YGL197W YPL260WQ08977 551 aa2.2□□□□□ -2.06
MDS3YGL197W NFS1P25374 497 aa2.19□□□□□ -2.06
MDS3YGL197W YJL181WP46987 611 aa2.19□□□□□ -2.06
MDS3YGL197W SUT1P53032 299 aaKnown RBP2.19□□□□□ -2.06
MDS3YGL197W KIP3P53086 805 aaKnown RBP2.19□□□□□ -2.06
MDS3YGL197W YCS4Q06156 1176 aa2.19□□□□□ -2.06
MDS3YGL197W TRP3P00937 484 aa2.19□□□□□ -2.06
MDS3YGL197W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
MDS3YGL197W NPR1P22211 790 aa2.19□□□□□ -2.06
MDS3YGL197W RMD1Q03441 430 aa2.19□□□□□ -2.06
MDS3YGL197W NOC3Q07896 663 aaPredicted RBP2.19□□□□□ -2.06
MDS3YGL197W SMC4Q12267 1418 aa2.19□□□□□ -2.06
MDS3YGL197W YKL222CP35995 705 aa2.19□□□□□ -2.06
MDS3YGL197W CTH1P47976 325 aa2.19□□□□□ -2.06
MDS3YGL197W NUT1P53114 1132 aa2.19□□□□□ -2.06
MDS3YGL197W YAF9P53930 226 aa2.19□□□□□ -2.06
MDS3YGL197W MCM5P29496 775 aaKnown RBP2.18□□□□□ -2.06
MDS3YGL197W PPX1P38698 397 aa2.18□□□□□ -2.06
MDS3YGL197W PIK1P39104 1066 aa2.18□□□□□ -2.06
MDS3YGL197W GIS1Q03833 894 aa2.18□□□□□ -2.06
MDS3YGL197W HAP1P0CE41 1502 aa2.18□□□□□ -2.06
MDS3YGL197W TFA2P36145 328 aa2.18□□□□□ -2.06
MDS3YGL197W YHL012WP38709 493 aa2.18□□□□□ -2.06
MDS3YGL197W YHL008CP38750 627 aa2.18□□□□□ -2.06
MDS3YGL197W YAR028WP39548 234 aa2.18□□□□□ -2.06
MDS3YGL197W TNA1P53322 534 aa2.18□□□□□ -2.06
MDS3YGL197W DMA2P53924 522 aa2.18□□□□□ -2.06
MDS3YGL197W GEF1P37020 779 aa2.18□□□□□ -2.06
MDS3YGL197W POL12P38121 705 aaPredicted RBP2.18□□□□□ -2.06
MDS3YGL197W OYE3P41816 400 aaPredicted RBP2.18□□□□□ -2.06
MDS3YGL197W ESC8Q08119 714 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms