RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W YML133CQ03099 1374 aa5.23□□□□□ -1.57
TFB3YDR460W YLL067CQ07888 1374 aa5.23□□□□□ -1.57
TFB3YDR460W YLL066CQ99208 1374 aa5.23□□□□□ -1.57
TFB3YDR460W GCN2P15442 1659 aa5.22□□□□□ -1.57
TFB3YDR460W TAF13P11747 167 aa5.22□□□□□ -1.57
TFB3YDR460W RAD51P25454 400 aa5.22□□□□□ -1.57
TFB3YDR460W TOA1P32773 286 aa5.22□□□□□ -1.57
TFB3YDR460W SAP190P36123 1033 aa5.22□□□□□ -1.57
TFB3YDR460W UGA2P38067 497 aa5.22□□□□□ -1.57
TFB3YDR460W MED8P38304 223 aa5.22□□□□□ -1.57
TFB3YDR460W HXT8P40886 569 aa5.22□□□□□ -1.57
TFB3YDR460W ALD2P47771 506 aa5.22□□□□□ -1.57
TFB3YDR460W MTO1P53070 669 aa5.22□□□□□ -1.57
TFB3YDR460W SCW11P53189 542 aa5.22□□□□□ -1.57
TFB3YDR460W UFD2P54860 961 aa5.22□□□□□ -1.57
TFB3YDR460W MRS2Q01926 470 aa5.22□□□□□ -1.57
TFB3YDR460W TRS120Q04183 1289 aa5.22□□□□□ -1.57
TFB3YDR460W LCB5Q06147 687 aaKnown RBP5.22□□□□□ -1.57
TFB3YDR460W TY1A-BLQ12266 440 aa5.22□□□□□ -1.57
TFB3YDR460W VID30P53076 958 aa5.21□□□□□ -1.58
TFB3YDR460W YDR444WQ04093 687 aa5.21□□□□□ -1.58
TFB3YDR460W ECM16Q04217 1267 aaKnown RBP5.21□□□□□ -1.58
TFB3YDR460W GLE1Q12315 538 aa5.21□□□□□ -1.58
TFB3YDR460W YOL087CQ99247 1116 aa5.21□□□□□ -1.58
TFB3YDR460W KNS1P32350 737 aaPredicted RBP5.2□□□□□ -1.58
TFB3YDR460W SMC1P32908 1225 aa5.2□□□□□ -1.58
TFB3YDR460W SWH1P35845 1188 aa5.2□□□□□ -1.58
TFB3YDR460W MIC60P36112 540 aa5.2□□□□□ -1.58
TFB3YDR460W RTT107P38850 1070 aa5.2□□□□□ -1.58
TFB3YDR460W ECM1P39715 212 aa5.2□□□□□ -1.58
TFB3YDR460W RPN11P43588 306 aaKnown RBP5.2□□□□□ -1.58
TFB3YDR460W YOR389WQ08912 624 aa5.2□□□□□ -1.58
TFB3YDR460W SFI1Q12369 946 aa5.2□□□□□ -1.58
TFB3YDR460W TY3B-IQ7LHG5 1498 aaKnown RBP5.2□□□□□ -1.58
TFB3YDR460W TY4B-PA0A0B7P3V8 1104 aa5.19□□□□□ -1.58
TFB3YDR460W RGP1P16664 663 aa5.19□□□□□ -1.58
TFB3YDR460W MSN1P22148 382 aa5.19□□□□□ -1.58
TFB3YDR460W MRC1P25588 1096 aa5.19□□□□□ -1.58
TFB3YDR460W PSO2P30620 661 aa5.19□□□□□ -1.58
TFB3YDR460W PBY1P38254 753 aa5.19□□□□□ -1.58
TFB3YDR460W FIR1P40020 876 aa5.19□□□□□ -1.58
TFB3YDR460W DJP1P40564 432 aa5.19□□□□□ -1.58
TFB3YDR460W ITC1P53125 1264 aa5.19□□□□□ -1.58
TFB3YDR460W SUB1P54000 292 aaKnown RBP5.19□□□□□ -1.58
TFB3YDR460W NAM8Q00539 523 aaKnown RBP5.19□□□□□ -1.58
TFB3YDR460W MNL2Q12205 849 aa5.19□□□□□ -1.58
TFB3YDR460W YLL054CQ12244 843 aa5.19□□□□□ -1.58
TFB3YDR460W WHI5Q12416 295 aa5.19□□□□□ -1.58
TFB3YDR460W RRP14P36080 434 aaKnown RBP5.18□□□□□ -1.58
TFB3YDR460W EXO84P38261 753 aa5.18□□□□□ -1.58
TFB3YDR460W RSM25P40496 264 aa5.18□□□□□ -1.58
TFB3YDR460W MPP10P47083 593 aaKnown RBP5.18□□□□□ -1.58
TFB3YDR460W LYS4P49367 693 aaPredicted RBP5.18□□□□□ -1.58
TFB3YDR460W SKP1P52286 194 aa5.18□□□□□ -1.58
TFB3YDR460W PDS5Q04264 1277 aa5.18□□□□□ -1.58
TFB3YDR460W NDL1Q06568 189 aa5.18□□□□□ -1.58
TFB3YDR460W YOR296WQ08748 1289 aa5.18□□□□□ -1.58
TFB3YDR460W RAD50P12753 1312 aa5.18□□□□□ -1.58
TFB3YDR460W YRF1-4O13559 1382 aa5.17□□□□□ -1.58
TFB3YDR460W MRPL16P38064 232 aa5.17□□□□□ -1.58
TFB3YDR460W ISW1P38144 1129 aa5.17□□□□□ -1.58
TFB3YDR460W GIP1P38229 639 aa5.17□□□□□ -1.58
TFB3YDR460W YBR287WP38355 427 aa5.17□□□□□ -1.58
TFB3YDR460W RAD55P38953 406 aa5.17□□□□□ -1.58
TFB3YDR460W NTA1P40354 457 aa5.17□□□□□ -1.58
TFB3YDR460W RGD2P43556 714 aa5.17□□□□□ -1.58
TFB3YDR460W ALD3P54114 506 aa5.17□□□□□ -1.58
TFB3YDR460W CUS1Q02554 436 aaPredicted RBP5.17□□□□□ -1.58
TFB3YDR460W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
TFB3YDR460W GRX3Q03835 250 aa5.17□□□□□ -1.58
TFB3YDR460W GPI13Q07830 1017 aa5.17□□□□□ -1.58
TFB3YDR460W BMS1Q08965 1183 aaKnown RBP5.17□□□□□ -1.58
TFB3YDR460W STB3Q12427 513 aa5.17□□□□□ -1.58
TFB3YDR460W RVB2Q12464 471 aaKnown RBP5.17□□□□□ -1.58
TFB3YDR460W NHA1Q99271 985 aa5.17□□□□□ -1.58
TFB3YDR460W URB1P34241 1764 aaKnown RBP5.16□□□□□ -1.58
TFB3YDR460W NUP192P47054 1683 aa5.16□□□□□ -1.58
TFB3YDR460W MRPS28P21771 286 aa5.16□□□□□ -1.58
TFB3YDR460W MET4P32389 672 aa5.16□□□□□ -1.58
TFB3YDR460W ASF1P32447 279 aa5.16□□□□□ -1.58
TFB3YDR460W NAB2P32505 525 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
TFB3YDR460W BSD2P38356 321 aa5.16□□□□□ -1.58
TFB3YDR460W NPR2P39923 615 aa5.16□□□□□ -1.58
TFB3YDR460W IAH1P41734 238 aa5.16□□□□□ -1.58
TFB3YDR460W ROG3P43602 733 aa5.16□□□□□ -1.58
TFB3YDR460W MDG1P53885 366 aa5.16□□□□□ -1.58
TFB3YDR460W TY1A-MR1Q04215 440 aa5.16□□□□□ -1.58
TFB3YDR460W GIN4Q12263 1142 aa5.16□□□□□ -1.58
TFB3YDR460W SWI6P09959 803 aa5.15□□□□□ -1.59
TFB3YDR460W PRP45P28004 379 aaPredicted RBP5.15□□□□□ -1.59
TFB3YDR460W RPC82P32349 654 aa5.15□□□□□ -1.59
TFB3YDR460W IRS4P36115 615 aaKnown RBP5.15□□□□□ -1.59
TFB3YDR460W RPC37P36121 282 aa5.15□□□□□ -1.59
TFB3YDR460W NPR3P38742 1146 aa5.15□□□□□ -1.59
TFB3YDR460W PEA2P40091 420 aa5.15□□□□□ -1.59
TFB3YDR460W DOT5P40553 215 aa5.15□□□□□ -1.59
TFB3YDR460W SEC27P41811 889 aaKnown RBP5.15□□□□□ -1.59
TFB3YDR460W POL32P47110 350 aa5.15□□□□□ -1.59
TFB3YDR460W KIP3P53086 805 aaKnown RBP5.15□□□□□ -1.59
TFB3YDR460W RSC4Q02206 625 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms