RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	LOS1	P33418	1100 aa	Predicted RBP	4.73	□□□□□ -1.65
UPC2	YDR213W	NPL4	P33755	580 aa		4.73	□□□□□ -1.65
UPC2	YDR213W	SIP3	P38717	1229 aa		4.73	□□□□□ -1.65
UPC2	YDR213W	HOS4	P40480	1083 aa		4.73	□□□□□ -1.65
UPC2	YDR213W	HCR1	Q05775	265 aa	Known RBP	4.73	□□□□□ -1.65
UPC2	YDR213W	ADE6	P38972	1358 aa	Known RBP	4.73	□□□□□ -1.65
UPC2	YDR213W	PEP12	P32854	288 aa		4.73	□□□□□ -1.65
UPC2	YDR213W	ARO80	Q04052	950 aa		4.73	□□□□□ -1.65
UPC2	YDR213W	HXK1	P04806	485 aa	Known RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	PMR1	P13586	950 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	PHO13	P19881	312 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	SIT4	P20604	311 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	NUF2	P33895	451 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	MRX1	P40050	688 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	ATG36	P46983	293 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	YKE2	P52553	114 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	ZPR1	P53303	486 aa	Known RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	PLP2	Q12017	286 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	RRP6	Q12149	733 aa	Known RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	RRP5	Q05022	1729 aa	Known RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	CDC3	P32457	520 aa	Known RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	PKH3	Q03306	898 aa	Predicted RBP	4.72	□□□□□ -1.65
UPC2	YDR213W	OSH2	Q12451	1283 aa		4.72	□□□□□ -1.65
UPC2	YDR213W	MTF2	P10849	440 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	TGL4	P36165	910 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	SLI15	P38283	698 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	SPO22	P40511	975 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	YPR097W	Q06839	1073 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	YOL057W	Q08225	711 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	TY4A-H	Q6Q5P6	413 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	VAN1	P23642	535 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	FBP26	P32604	452 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	SEC66	P33754	206 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	YET1	P35723	206 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	YKT6	P36015	200 aa	Known RBP	4.71	□□□□□ -1.66
UPC2	YDR213W	YPL109C	Q02981	657 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	ERV41	Q04651	352 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	VAC14	Q06708	880 aa		4.71	□□□□□ -1.66
UPC2	YDR213W	RIB2	Q12362	591 aa	Known RBP	4.71	□□□□□ -1.66
UPC2	YDR213W	ARG4	P04076	463 aa	Predicted RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	CDC37	P06101	506 aa	Known RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	ADE17	P38009	592 aa	Known RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	YHL017W	P38745	532 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	RSC8	P43609	557 aa	Known RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	DAS1	P47005	663 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	PXR1	P53335	271 aa	Predicted RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	GFD1	Q04839	188 aa	Known RBP	4.7	□□□□□ -1.66
UPC2	YDR213W	DPL1	Q05567	589 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	PSK2	Q08217	1101 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	SPO12	P17123	173 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	MRPS28	P21771	286 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
UPC2	YDR213W	LSC2	P53312	427 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	SFB2	P53953	876 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	ADA2	Q02336	434 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	UME1	Q03010	460 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	STE23	Q06010	1027 aa		4.7	□□□□□ -1.66
UPC2	YDR213W	SUP35	P05453	685 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	LPD1	P09624	499 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	GCD2	P12754	651 aa	Predicted RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	GAL11	P19659	1081 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	PRP4	P20053	465 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	ASF1	P32447	279 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	FZO1	P38297	855 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	KIC1	P38692	1080 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	TOM71	P38825	639 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	YMR147W	P40218	223 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	SPR3	P41901	512 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	MLC1	P53141	149 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	TFB2	Q02939	513 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	SOV1	Q04748	898 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	ALE1	Q08548	619 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	ARD1	P07347	238 aa	Predicted RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	MATALPHA2	P0CY08	210 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	HMLALPHA2	P0CY09	210 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	BUD2	P33314	1104 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	YMR124W	P39523	943 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	YAP5	P40574	245 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	MAL13	P53338	473 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	ALF1	P53904	254 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	ERG5	P54781	538 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	EIS1	Q05050	843 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	NSE3	Q05541	303 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	YSH1	Q06224	779 aa	Predicted RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	CSR1	Q06705	408 aa	Known RBP	4.69	□□□□□ -1.66
UPC2	YDR213W	PSR2	Q07949	397 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	MMP1	Q12372	583 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	WHI5	Q12416	295 aa		4.69	□□□□□ -1.66
UPC2	YDR213W	CDC8	P00572	216 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	IME1	P21190	360 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	PHO87	P25360	923 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	BUD14	P27637	709 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YEL043W	P32618	956 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	RPC25	P35718	212 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	UBP12	P39538	1254 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	FYV8	P46949	817 aa	Known RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	ILM1	P47155	203 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YKU80	Q04437	629 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YLR287C	Q05881	355 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YLR407W	Q06070	228 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms