RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	RET1	P22276	1149 aa	Known RBP	3.51	□□□□□ -1.85
CSN9	YDR179C	SRO9	P25567	434 aa	Known RBP	3.51	□□□□□ -1.85
CSN9	YDR179C	SLS1	P42900	643 aa		3.51	□□□□□ -1.85
CSN9	YDR179C	RKM2	Q03942	479 aa		3.51	□□□□□ -1.85
CSN9	YDR179C	GPI13	Q07830	1017 aa		3.51	□□□□□ -1.85
CSN9	YDR179C	OXR1	Q08952	273 aa		3.51	□□□□□ -1.85
CSN9	YDR179C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
CSN9	YDR179C	MSH3	P25336	1018 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	SQT1	P35184	431 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	NEM1	P38757	446 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	GTS1	P40956	396 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	VPS53	P47061	822 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	RSM26	P47141	266 aa		3.5	□□□□□ -1.85
CSN9	YDR179C	UTP5	Q04177	643 aa	Known RBP	3.5	□□□□□ -1.85
CSN9	YDR179C	YLR257W	Q06146	321 aa	Known RBP	3.5	□□□□□ -1.85
CSN9	YDR179C	NBA1	Q08229	501 aa	Known RBP	3.5	□□□□□ -1.85
CSN9	YDR179C	PRP40	P33203	583 aa	Known RBP	3.49	□□□□□ -1.85
CSN9	YDR179C	STM1	P39015	273 aa	Known RBP	3.49	□□□□□ -1.85
CSN9	YDR179C	XKS1	P42826	600 aa		3.49	□□□□□ -1.85
CSN9	YDR179C	RIM8	P53179	542 aa		3.49	□□□□□ -1.85
CSN9	YDR179C	SNO2	P53823	222 aa		3.49	□□□□□ -1.85
CSN9	YDR179C	MRPL22	P53881	309 aa		3.49	□□□□□ -1.85
CSN9	YDR179C	PEX13	P80667	386 aa		3.49	□□□□□ -1.85
CSN9	YDR179C	RSA3	Q05942	220 aa	Known RBP	3.49	□□□□□ -1.85
CSN9	YDR179C	SOD2	P00447	233 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	TAF13	P11747	167 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	SAM35	P14693	329 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	PPX1	P38698	397 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	YHL050C	P38721	697 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	YHR219W	P38900	624 aa		3.48	□□□□□ -1.85
CSN9	YDR179C	PHO4	P07270	312 aa	Known RBP	3.47	□□□□□ -1.85
CSN9	YDR179C	ADD66	P36040	267 aa		3.47	□□□□□ -1.85
CSN9	YDR179C	QNS1	P38795	714 aa	Known RBP	3.47	□□□□□ -1.85
CSN9	YDR179C	ULP1	Q02724	621 aa		3.47	□□□□□ -1.85
CSN9	YDR179C	COQ4	O13525	335 aa		3.46	□□□□□ -1.86
CSN9	YDR179C	AIM3	P38266	947 aa	Known RBP	3.46	□□□□□ -1.86
CSN9	YDR179C	PEX28	P38848	579 aa		3.46	□□□□□ -1.86
CSN9	YDR179C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
CSN9	YDR179C	DAL4	Q04895	635 aa		3.46	□□□□□ -1.86
CSN9	YDR179C	YOR352W	Q08816	343 aa		3.46	□□□□□ -1.86
CSN9	YDR179C	SEC20	P28791	383 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	AIM26	P32858	118 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	RDH54	P38086	958 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	CCZ1	P38273	704 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	ETP1	P38748	585 aa	Known RBP	3.45	□□□□□ -1.86
CSN9	YDR179C	SSF1	P38789	453 aa	Predicted RBP	3.45	□□□□□ -1.86
CSN9	YDR179C	HNT2	P49775	206 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	ADI1	Q03677	179 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	YDL177C	Q12257	170 aa		3.45	□□□□□ -1.86
CSN9	YDR179C	SPS1	P08458	490 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	YSC84	P32793	468 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	DAK2	P43550	591 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	YJL045W	P47052	634 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	YNR063W	P53749	607 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	GSF2	Q04697	403 aa	Known RBP	3.44	□□□□□ -1.86
CSN9	YDR179C	RSC58	Q07979	502 aa		3.44	□□□□□ -1.86
CSN9	YDR179C	MSC6	Q08818	692 aa	Known RBP	3.44	□□□□□ -1.86
CSN9	YDR179C	YLR358C	O13565	187 aa		3.43	□□□□□ -1.86
CSN9	YDR179C	RPS13	P05756	151 aa	Known RBP	3.43	□□□□□ -1.86
CSN9	YDR179C	SEC23	P15303	768 aa	Known RBP	3.43	□□□□□ -1.86
CSN9	YDR179C	ENT3	P47160	408 aa		3.43	□□□□□ -1.86
CSN9	YDR179C	YGL140C	P53120	1219 aa		3.43	□□□□□ -1.86
CSN9	YDR179C	YPL109C	Q02981	657 aa		3.43	□□□□□ -1.86
CSN9	YDR179C	EST2	Q06163	884 aa		3.43	□□□□□ -1.86
CSN9	YDR179C	MET4	P32389	672 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	NMD3	P38861	518 aa	Known RBP	3.42	□□□□□ -1.86
CSN9	YDR179C	RPN3	P40016	523 aa	Known RBP	3.42	□□□□□ -1.86
CSN9	YDR179C	TNA1	P53322	534 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	HOS3	Q02959	697 aa	Known RBP	3.42	□□□□□ -1.86
CSN9	YDR179C	RSB1	Q08417	382 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	YPL260W	Q08977	551 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	YPL277C	Q08989	487 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	MCD1	Q12158	566 aa		3.42	□□□□□ -1.86
CSN9	YDR179C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
CSN9	YDR179C	UGA4	P32837	571 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	TOD6	P34219	525 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	BAP2	P38084	609 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	PIK1	P39104	1066 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	SEC26	P41810	973 aa	Known RBP	3.41	□□□□□ -1.86
CSN9	YDR179C	YML122C	Q03207	126 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	URN1	Q06525	465 aa	Known RBP	3.41	□□□□□ -1.86
CSN9	YDR179C	PTC5	Q12511	572 aa		3.41	□□□□□ -1.86
CSN9	YDR179C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
CSN9	YDR179C	KIP1	P28742	1111 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	SLD2	P34252	453 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	THI12	P42883	340 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	THI5	P43534	340 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	THI11	P47183	340 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	CLU1	Q03690	1277 aa	Known RBP	3.4	□□□□□ -1.87
CSN9	YDR179C	SGD1	Q06132	899 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	THI13	Q07748	340 aa		3.4	□□□□□ -1.87
CSN9	YDR179C	HXK1	P04806	485 aa	Known RBP	3.39	□□□□□ -1.87
CSN9	YDR179C	PRE9	P23638	258 aa	Known RBP	3.39	□□□□□ -1.87
CSN9	YDR179C	RPT1	P33299	467 aa	Known RBP	3.39	□□□□□ -1.87
CSN9	YDR179C	ABZ1	P37254	787 aa	Predicted RBP	3.39	□□□□□ -1.87
CSN9	YDR179C	MRPS18	P42847	217 aa		3.39	□□□□□ -1.87
CSN9	YDR179C	YGR122W	P53272	402 aa		3.39	□□□□□ -1.87
CSN9	YDR179C	DOM34	P33309	386 aa		3.38	□□□□□ -1.87
CSN9	YDR179C	ALG3	P38179	458 aa		3.38	□□□□□ -1.87
CSN9	YDR179C	LAM1	P38851	1228 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms