RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C LYP1P32487 611 aa5.9□□□□□ -1.47
TRM1YDR120C REI1P38344 393 aaPredicted RBP5.9□□□□□ -1.47
TRM1YDR120C NSE3Q05541 303 aa5.9□□□□□ -1.47
TRM1YDR120C TDA5Q06417 326 aaKnown RBP5.9□□□□□ -1.47
TRM1YDR120C SRP40P32583 406 aaPredicted RBP5.89□□□□□ -1.47
TRM1YDR120C FAR11P53917 953 aa5.89□□□□□ -1.47
TRM1YDR120C RKM2Q03942 479 aa5.89□□□□□ -1.47
TRM1YDR120C THO2P53552 1597 aaKnown RBP5.89□□□□□ -1.47
TRM1YDR120C DSE4P53753 1117 aa5.88□□□□□ -1.47
TRM1YDR120C YLL054CQ12244 843 aa5.88□□□□□ -1.47
TRM1YDR120C MAE1P36013 669 aaKnown RBP5.88□□□□□ -1.47
TRM1YDR120C SPO74P45819 413 aa5.88□□□□□ -1.47
TRM1YDR120C RAT1Q02792 1006 aaKnown RBP5.88□□□□□ -1.47
TRM1YDR120C SPO20Q04359 397 aa5.88□□□□□ -1.47
TRM1YDR120C YMR074CQ04773 145 aa5.88□□□□□ -1.47
TRM1YDR120C STI1P15705 589 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
TRM1YDR120C AGP1P25376 633 aa5.87□□□□□ -1.47
TRM1YDR120C SYP1P25623 870 aaKnown RBP5.87□□□□□ -1.47
TRM1YDR120C AFG2P32794 780 aa5.87□□□□□ -1.47
TRM1YDR120C SEA4P38164 1038 aa5.87□□□□□ -1.47
TRM1YDR120C NAN1Q02931 896 aaKnown RBP5.87□□□□□ -1.47
TRM1YDR120C BDF2Q07442 638 aa5.87□□□□□ -1.47
TRM1YDR120C ALG6Q12001 544 aaKnown RBP5.87□□□□□ -1.47
TRM1YDR120C ATG14P38270 344 aa5.86□□□□□ -1.47
TRM1YDR120C KRI1P42846 591 aaKnown RBP5.86□□□□□ -1.47
TRM1YDR120C TIF35Q04067 274 aaKnown RBP5.86□□□□□ -1.47
TRM1YDR120C ESC2Q06340 456 aa5.86□□□□□ -1.47
TRM1YDR120C RAD4P14736 754 aa5.85□□□□□ -1.47
TRM1YDR120C ABD1P32783 436 aaPredicted RBP5.85□□□□□ -1.47
TRM1YDR120C YKL091CP33324 310 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C RRM3P38766 723 aa5.85□□□□□ -1.47
TRM1YDR120C YAR028WP39548 234 aa5.85□□□□□ -1.47
TRM1YDR120C CNN1P43618 361 aa5.85□□□□□ -1.47
TRM1YDR120C YNR063WP53749 607 aa5.85□□□□□ -1.47
TRM1YDR120C RPN4Q03465 531 aa5.85□□□□□ -1.47
TRM1YDR120C YLR225CQ05948 407 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C CDC53Q12018 815 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C DBP5P20449 482 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C SBA1P28707 216 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C SBE2P42223 864 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C KIP3P53086 805 aaKnown RBP5.85□□□□□ -1.47
TRM1YDR120C YGR045CP53229 120 aa5.85□□□□□ -1.47
TRM1YDR120C AVO1Q08236 1176 aa5.85□□□□□ -1.47
TRM1YDR120C MDS3P53094 1487 aa5.85□□□□□ -1.47
TRM1YDR120C AI1P03875 834 aa5.84□□□□□ -1.47
TRM1YDR120C BOI2P39969 1040 aa5.84□□□□□ -1.47
TRM1YDR120C HUL5P53119 910 aa5.84□□□□□ -1.47
TRM1YDR120C SHE9Q04172 456 aa5.84□□□□□ -1.47
TRM1YDR120C YOR223WQ12015 292 aa5.84□□□□□ -1.47
TRM1YDR120C INO1P11986 533 aa5.83□□□□□ -1.48
TRM1YDR120C STE5P32917 917 aa5.83□□□□□ -1.48
TRM1YDR120C MOT2P34909 587 aaKnown RBP5.83□□□□□ -1.48
TRM1YDR120C ALG3P38179 458 aa5.83□□□□□ -1.48
TRM1YDR120C YNR014WP53719 212 aa5.83□□□□□ -1.48
TRM1YDR120C AOS1Q06624 347 aa5.83□□□□□ -1.48
TRM1YDR120C LAP2Q10740 671 aa5.83□□□□□ -1.48
TRM1YDR120C TY1A-NL1Q12391 440 aaKnown RBP5.83□□□□□ -1.48
TRM1YDR120C TRK2P28584 889 aa5.82□□□□□ -1.48
TRM1YDR120C VBA5P36172 582 aa5.82□□□□□ -1.48
TRM1YDR120C MPH1P40562 993 aa5.82□□□□□ -1.48
TRM1YDR120C TIM54P47045 478 aa5.82□□□□□ -1.48
TRM1YDR120C RKM4Q12504 494 aa5.82□□□□□ -1.48
TRM1YDR120C MRP8P35719 219 aa5.82□□□□□ -1.48
TRM1YDR120C YBR184WP38299 523 aa5.82□□□□□ -1.48
TRM1YDR120C BUD6P41697 788 aa5.82□□□□□ -1.48
TRM1YDR120C NCE103P53615 221 aa5.82□□□□□ -1.48
TRM1YDR120C ELA1P53861 379 aaPredicted RBP5.82□□□□□ -1.48
TRM1YDR120C DOT1Q04089 582 aaKnown RBP5.82□□□□□ -1.48
TRM1YDR120C YPL066WQ12194 479 aa5.82□□□□□ -1.48
TRM1YDR120C YOR131CQ12486 218 aa5.82□□□□□ -1.48
TRM1YDR120C PTC5Q12511 572 aa5.82□□□□□ -1.48
TRM1YDR120C CIT2P08679 460 aa5.81□□□□□ -1.48
TRM1YDR120C PUF4P25339 888 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48 RIP-Chip
TRM1YDR120C RGD1P38339 666 aa5.81□□□□□ -1.48
TRM1YDR120C HSE1P38753 452 aa5.81□□□□□ -1.48
TRM1YDR120C VPS53P47061 822 aa5.81□□□□□ -1.48
TRM1YDR120C GAS5Q08193 484 aa5.81□□□□□ -1.48
TRM1YDR120C MCM7P38132 845 aa5.8□□□□□ -1.48
TRM1YDR120C PBP2P38151 413 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
TRM1YDR120C YHR020WP38708 688 aaKnown RBP5.8□□□□□ -1.48
TRM1YDR120C IRR1P40541 1150 aa5.8□□□□□ -1.48
TRM1YDR120C YFL066CP43538 392 aa5.8□□□□□ -1.48
TRM1YDR120C HNT2P49775 206 aa5.8□□□□□ -1.48
TRM1YDR120C XRN1P22147 1528 aaKnown RBP5.8□□□□□ -1.48
TRM1YDR120C MLS1P30952 554 aa5.79□□□□□ -1.48
TRM1YDR120C SFA1P32771 386 aa5.79□□□□□ -1.48
TRM1YDR120C PIN4P34217 668 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
TRM1YDR120C YKL107WP34251 309 aa5.79□□□□□ -1.48
TRM1YDR120C QNS1P38795 714 aaKnown RBP5.79□□□□□ -1.48
TRM1YDR120C NMD2P38798 1089 aaKnown RBP5.79□□□□□ -1.48
TRM1YDR120C OSW7P43611 510 aa5.79□□□□□ -1.48
TRM1YDR120C YGL176CP46945 554 aa5.79□□□□□ -1.48
TRM1YDR120C BUD9P53226 547 aa5.79□□□□□ -1.48
TRM1YDR120C RNH70P53331 553 aa5.79□□□□□ -1.48
TRM1YDR120C RSA3Q05942 220 aaKnown RBP5.79□□□□□ -1.48
TRM1YDR120C SPO75Q07798 868 aa5.79□□□□□ -1.48
TRM1YDR120C PBY1P38254 753 aa5.79□□□□□ -1.48
TRM1YDR120C PPM2Q08282 695 aa5.79□□□□□ -1.48
TRM1YDR120C THI72Q08579 599 aa5.79□□□□□ -1.48
TRM1YDR120C SBP1P10080 294 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms