RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C DRS1P32892 752 aaKnown RBP12.96□□□□□ -0.33
TRM1YDR120C MTC1P47018 478 aaKnown RBP12.71□□□□□ -0.38
TRM1YDR120C BFR2Q06631 534 aaKnown RBP11.31□□□□□ -0.6
TRM1YDR120C DIP2Q12220 943 aaPredicted RBP10.97□□□□□ -0.65
TRM1YDR120C AVT3P36062 692 aa10.9□□□□□ -0.66
TRM1YDR120C TFA1P36100 482 aa10.81□□□□□ -0.68
TRM1YDR120C RSE1Q04693 1361 aaKnown RBP10.29□□□□□ -0.76
TRM1YDR120C ISW2Q08773 1120 aa10.27□□□□□ -0.76
TRM1YDR120C FAP1P53971 965 aa10.15□□□□□ -0.78
TRM1YDR120C RPG1P38249 964 aaKnown RBP10.13□□□□□ -0.79
TRM1YDR120C PRI1P10363 409 aa10.08□□□□□ -0.8
TRM1YDR120C RPL17AP05740 184 aaKnown RBP9.89□□□□□ -0.83
TRM1YDR120C RPL17BP46990 184 aaKnown RBP9.89□□□□□ -0.83
TRM1YDR120C AAD16Q02895 342 aa9.87□□□□□ -0.83
TRM1YDR120C REB1P21538 810 aa9.74□□□□□ -0.85
TRM1YDR120C TSR3Q12094 313 aaKnown RBP9.58□□□□□ -0.88
TRM1YDR120C SPT21P35209 758 aa9.56□□□□□ -0.88
TRM1YDR120C PRY3P47033 881 aa9.49□□□□□ -0.89
TRM1YDR120C RIM101P33400 625 aa9.48□□□□□ -0.89
TRM1YDR120C RQC2Q12532 1038 aaKnown RBP9.35□□□□□ -0.91
TRM1YDR120C PTP3P40048 928 aa9.26□□□□□ -0.93
TRM1YDR120C YKR023WP36119 530 aaKnown RBP9.2□□□□□ -0.94
TRM1YDR120C MRPL32P25348 183 aa9.19□□□□□ -0.94
TRM1YDR120C OXP1P28273 1286 aa9.19□□□□□ -0.94
TRM1YDR120C SSP1P38871 571 aa9.14□□□□□ -0.95
TRM1YDR120C YAH1Q12184 172 aaKnown RBP9.06□□□□□ -0.96
TRM1YDR120C YCK3P39962 524 aa9.03□□□□□ -0.96
TRM1YDR120C YIL055CP40523 627 aaKnown RBP9.03□□□□□ -0.96
TRM1YDR120C TFC8Q12308 588 aa9.02□□□□□ -0.97
TRM1YDR120C HOP09932 586 aa9□□□□□ -0.97
TRM1YDR120C DMA1P38823 416 aa8.97□□□□□ -0.97
TRM1YDR120C YLR271WQ06152 274 aa8.97□□□□□ -0.97
TRM1YDR120C HAA1Q12753 694 aaKnown RBP8.97□□□□□ -0.97
TRM1YDR120C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
TRM1YDR120C CDC27P38042 758 aa8.95□□□□□ -0.98
TRM1YDR120C DCD1P06773 312 aa8.93□□□□□ -0.98
TRM1YDR120C RSM7P47150 247 aa8.91□□□□□ -0.98
TRM1YDR120C MGA2P40578 1113 aa8.8□□□□□ -1
TRM1YDR120C BCH2P36122 765 aa8.76□□□□□ -1.01
TRM1YDR120C AI2P03876 854 aa8.74□□□□□ -1.01
TRM1YDR120C PSD2P53037 1138 aaKnown RBP8.71□□□□□ -1.01
TRM1YDR120C CST9Q06032 482 aa8.71□□□□□ -1.01
TRM1YDR120C BBC1P47068 1157 aa8.66□□□□□ -1.02
TRM1YDR120C EPS1P40557 701 aa8.63□□□□□ -1.03
TRM1YDR120C SCY1P53009 804 aa8.57□□□□□ -1.04
TRM1YDR120C BDF1P35817 686 aa8.56□□□□□ -1.04
TRM1YDR120C UBP10P53874 792 aaPredicted RBP8.55□□□□□ -1.04
TRM1YDR120C MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
TRM1YDR120C YGL015CP33199 130 aa8.51□□□□□ -1.05
TRM1YDR120C MRM1P25270 412 aa8.48□□□□□ -1.05
TRM1YDR120C SAS10Q12136 610 aaPredicted RBP8.45□□□□□ -1.06
TRM1YDR120C RAM2P29703 316 aa8.43□□□□□ -1.06
TRM1YDR120C RCR1P38212 213 aa8.4□□□□□ -1.07
TRM1YDR120C SLX5P32828 619 aaKnown RBP8.39□□□□□ -1.07
TRM1YDR120C RTG3P38165 486 aa8.38□□□□□ -1.07
TRM1YDR120C SET1P38827 1080 aaKnown RBP8.29□□□□□ -1.08
TRM1YDR120C VPS29P38759 282 aa8.29□□□□□ -1.08
TRM1YDR120C MAK11P20484 414 aaKnown RBP8.28□□□□□ -1.08
TRM1YDR120C LEO1P38439 464 aa8.25□□□□□ -1.09
TRM1YDR120C LEU3P08638 886 aa8.23□□□□□ -1.09
TRM1YDR120C YPR148CQ06523 435 aa8.2□□□□□ -1.1
TRM1YDR120C YMR1P47147 688 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
TRM1YDR120C TIF4632P39936 914 aaKnown RBP8.18□□□□□ -1.1
TRM1YDR120C IFH1P39520 1085 aa8.17□□□□□ -1.1
TRM1YDR120C COQ8P27697 501 aa8.16□□□□□ -1.1
TRM1YDR120C STS1P38637 319 aa8.16□□□□□ -1.1
TRM1YDR120C VPS70P47161 811 aa8.15□□□□□ -1.11
TRM1YDR120C TGL3P40308 642 aa8.14□□□□□ -1.11
TRM1YDR120C DBP1P24784 617 aaKnown RBP8.13□□□□□ -1.11
TRM1YDR120C NSR1P27476 414 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
TRM1YDR120C CKB1P43639 278 aa8.13□□□□□ -1.11
TRM1YDR120C YFR006WP43590 535 aa8.12□□□□□ -1.11
TRM1YDR120C YOR238WQ08634 303 aa8.12□□□□□ -1.11
TRM1YDR120C NOP53Q12080 455 aaKnown RBP8.09□□□□□ -1.11
TRM1YDR120C MIF2P35201 549 aa8.09□□□□□ -1.11
TRM1YDR120C EDS1P38073 919 aa8.07□□□□□ -1.12
TRM1YDR120C YAP5P40574 245 aa8.07□□□□□ -1.12
TRM1YDR120C SPB4P25808 606 aaPredicted RBP8.06□□□□□ -1.12
TRM1YDR120C TAF7Q05021 590 aa8.03□□□□□ -1.12
TRM1YDR120C PIB1Q06651 286 aa8.02□□□□□ -1.13
TRM1YDR120C PTC3P34221 468 aaKnown RBP8□□□□□ -1.13
TRM1YDR120C RPN1P38764 993 aaKnown RBP7.99□□□□□ -1.13
TRM1YDR120C PBS2P08018 668 aa7.98□□□□□ -1.13
TRM1YDR120C DSF2P38213 736 aa7.98□□□□□ -1.13
TRM1YDR120C VMA1P17255 1071 aaKnown RBP7.97□□□□□ -1.13
TRM1YDR120C MST1P07236 462 aa7.94□□□□□ -1.14
TRM1YDR120C REF2P42073 533 aaPredicted RBP7.94□□□□□ -1.14
TRM1YDR120C SAM3Q08986 587 aa7.89□□□□□ -1.15
TRM1YDR120C GRE2Q12068 342 aaKnown RBP7.87□□□□□ -1.15
TRM1YDR120C ATH1P48016 1211 aa7.86□□□□□ -1.15
TRM1YDR120C MAM3Q12296 706 aa7.86□□□□□ -1.15
TRM1YDR120C GUT1P32190 709 aa7.86□□□□□ -1.15
TRM1YDR120C MAK21Q12176 1025 aaKnown RBP7.84□□□□□ -1.15
TRM1YDR120C COX6P00427 148 aa7.83□□□□□ -1.16
TRM1YDR120C GTT3P39996 337 aa7.83□□□□□ -1.16
TRM1YDR120C YNR021WP53723 404 aaKnown RBP7.83□□□□□ -1.16
TRM1YDR120C IES2P40154 320 aa7.82□□□□□ -1.16
TRM1YDR120C GYP5Q12344 894 aa7.81□□□□□ -1.16
TRM1YDR120C NUP42P49686 430 aaKnown RBP7.81□□□□□ -1.16
TRM1YDR120C UBP14P38237 781 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms