RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W ERG7P38604 731 aa8.82□□□□□ -1
ABP1YCR088W MIP6P38760 659 aaKnown RBP8.82□□□□□ -1
ABP1YCR088W HFM1P51979 1187 aa8.82□□□□□ -1
ABP1YCR088W MYO5Q04439 1219 aaKnown RBP8.82□□□□□ -1
ABP1YCR088W SPP382Q06411 708 aaPredicted RBP8.82□□□□□ -1
ABP1YCR088W RRP6Q12149 733 aaKnown RBP8.82□□□□□ -1
ABP1YCR088W FLO1P32768 1537 aa8.82□□□□□ -1
ABP1YCR088W ALG1P16661 449 aa8.81□□□□□ -1
ABP1YCR088W GDT1P38301 280 aaPredicted RBP8.81□□□□□ -1
ABP1YCR088W BCD1P38772 366 aa8.81□□□□□ -1
ABP1YCR088W CCT4P39078 528 aaKnown RBP8.81□□□□□ -1
ABP1YCR088W FYV8P46949 817 aaKnown RBP8.81□□□□□ -1
ABP1YCR088W YGL138CP53122 345 aa8.81□□□□□ -1
ABP1YCR088W SYF1Q04048 859 aaPredicted RBP8.81□□□□□ -1
ABP1YCR088W SEC23P15303 768 aaKnown RBP8.81□□□□□ -1
ABP1YCR088W ASF1P32447 279 aa8.81□□□□□ -1
ABP1YCR088W MDL2P33311 773 aa8.81□□□□□ -1
ABP1YCR088W RPC25P35718 212 aa8.81□□□□□ -1
ABP1YCR088W SHQ1P40486 507 aaPredicted RBP8.81□□□□□ -1
ABP1YCR088W EFM4P40516 257 aa8.81□□□□□ -1
ABP1YCR088W NSG2P53898 299 aa8.81□□□□□ -1
ABP1YCR088W NAF1P53919 492 aaKnown RBP8.81□□□□□ -1
ABP1YCR088W YDR341CQ05506 607 aaKnown RBP8.81□□□□□ -1
ABP1YCR088W ATG23Q06671 453 aa8.81□□□□□ -1
ABP1YCR088W CWC2Q12046 339 aaPredicted RBP8.81□□□□□ -1
ABP1YCR088W MTF2P10849 440 aa8.8□□□□□ -1
ABP1YCR088W RPO26P20435 155 aa8.8□□□□□ -1
ABP1YCR088W FRD1P32614 470 aaKnown RBP8.8□□□□□ -1
ABP1YCR088W EFM2P38347 419 aa8.8□□□□□ -1
ABP1YCR088W SMF1P38925 575 aa8.8□□□□□ -1
ABP1YCR088W VID27P40157 782 aa8.8□□□□□ -1
ABP1YCR088W DAK2P43550 591 aa8.8□□□□□ -1
ABP1YCR088W CTK3P46963 296 aaPredicted RBP8.8□□□□□ -1
ABP1YCR088W MAL13P53338 473 aa8.8□□□□□ -1
ABP1YCR088W UME1Q03010 460 aa8.8□□□□□ -1
ABP1YCR088W YMR102CQ03177 834 aa8.8□□□□□ -1
ABP1YCR088W TOS4Q06266 489 aa8.8□□□□□ -1
ABP1YCR088W VAC14Q06708 880 aa8.8□□□□□ -1
ABP1YCR088W RIX7Q07844 837 aaKnown RBP8.8□□□□□ -1
ABP1YCR088W YLR001CQ07895 862 aa8.8□□□□□ -1
ABP1YCR088W RRP1P35178 278 aaPredicted RBP8.79□□□□□ -1
ABP1YCR088W MCX1P38323 520 aaPredicted RBP8.79□□□□□ -1
ABP1YCR088W RGD1P38339 666 aa8.79□□□□□ -1
ABP1YCR088W HKR1P41809 1802 aa8.79□□□□□ -1
ABP1YCR088W PRP42Q03776 544 aaKnown RBP8.79□□□□□ -1
ABP1YCR088W BDF2Q07442 638 aa8.79□□□□□ -1
ABP1YCR088W YPL216WQ08964 1102 aa8.79□□□□□ -1
ABP1YCR088W CEX1Q12453 761 aa8.79□□□□□ -1
ABP1YCR088W SNF3P10870 884 aa8.78□□□□□ -1
ABP1YCR088W RAD57P25301 460 aa8.78□□□□□ -1
ABP1YCR088W KRE2P27809 442 aa8.78□□□□□ -1
ABP1YCR088W YFH7P43591 353 aa8.78□□□□□ -1
ABP1YCR088W YJL181WP46987 611 aa8.78□□□□□ -1
ABP1YCR088W TRS120Q04183 1289 aa8.78□□□□□ -1
ABP1YCR088W YLR287CQ05881 355 aa8.78□□□□□ -1
ABP1YCR088W TIP41Q12199 356 aa8.78□□□□□ -1
ABP1YCR088W MYO1P08964 1928 aa8.78□□□□□ -1
ABP1YCR088W PAP1P29468 568 aaKnown RBP8.78□□□□□ -1
ABP1YCR088W ECM32P32644 1121 aaKnown RBP8.78□□□□□ -1
ABP1YCR088W BUD16P39988 312 aa8.78□□□□□ -1
ABP1YCR088W VFA1P40080 203 aa8.78□□□□□ -1
ABP1YCR088W SFH1Q06168 426 aa8.78□□□□□ -1
ABP1YCR088W YAP7Q08182 245 aa8.78□□□□□ -1
ABP1YCR088W BUG1Q12191 341 aa8.78□□□□□ -1
ABP1YCR088W TUF1P02992 437 aaKnown RBP8.77□□□□□ -1.01
ABP1YCR088W YEL043WP32618 956 aa8.77□□□□□ -1.01
ABP1YCR088W STT3P39007 718 aaKnown RBP8.77□□□□□ -1.01
ABP1YCR088W TIF4632P39936 914 aaKnown RBP8.77□□□□□ -1.01
ABP1YCR088W HUL4P40985 892 aa8.77□□□□□ -1.01
ABP1YCR088W ALG2P43636 503 aa8.77□□□□□ -1.01
ABP1YCR088W RAD61Q99359 647 aa8.77□□□□□ -1.01
ABP1YCR088W CIT1P00890 479 aa8.76□□□□□ -1.01
ABP1YCR088W ECM1P39715 212 aa8.76□□□□□ -1.01
ABP1YCR088W MIC19P43594 170 aa8.76□□□□□ -1.01
ABP1YCR088W YGR153WP48238 217 aa8.76□□□□□ -1.01
ABP1YCR088W UBA2P52488 636 aa8.76□□□□□ -1.01
ABP1YCR088W RPT6Q01939 405 aaKnown RBP8.76□□□□□ -1.01
ABP1YCR088W NGL3Q03210 505 aa8.76□□□□□ -1.01
ABP1YCR088W DIB1Q06819 143 aaPredicted RBP8.76□□□□□ -1.01
ABP1YCR088W TOM70P07213 617 aaKnown RBP8.76□□□□□ -1.01
ABP1YCR088W PPR1P07272 904 aaPredicted RBP8.76□□□□□ -1.01
ABP1YCR088W SRP54P20424 541 aaKnown RBP8.76□□□□□ -1.01
ABP1YCR088W PDC6P26263 563 aaKnown RBP8.76□□□□□ -1.01
ABP1YCR088W MUD2P36084 527 aaKnown RBP8.76□□□□□ -1.01
ABP1YCR088W MED8P38304 223 aa8.76□□□□□ -1.01
ABP1YCR088W IES1P43579 692 aa8.76□□□□□ -1.01
ABP1YCR088W RTC4P53850 401 aa8.76□□□□□ -1.01
ABP1YCR088W YPL260WQ08977 551 aa8.76□□□□□ -1.01
ABP1YCR088W YOL087CQ99247 1116 aa8.76□□□□□ -1.01
ABP1YCR088W ACE2P21192 770 aa8.75□□□□□ -1.01
ABP1YCR088W PET10P36139 283 aa8.75□□□□□ -1.01
ABP1YCR088W PTC4P38089 393 aa8.75□□□□□ -1.01
ABP1YCR088W PIP2P52960 996 aa8.75□□□□□ -1.01
ABP1YCR088W RNT1Q02555 471 aa8.75□□□□□ -1.01
ABP1YCR088W SMD2Q06217 110 aaKnown RBP8.75□□□□□ -1.01
ABP1YCR088W NEW1Q08972 1196 aaKnown RBP8.75□□□□□ -1.01
ABP1YCR088W OSH2Q12451 1283 aa8.75□□□□□ -1.01
ABP1YCR088W THR4P16120 514 aaKnown RBP8.74□□□□□ -1.01
ABP1YCR088W SDA1P53313 767 aaKnown RBP8.74□□□□□ -1.01
ABP1YCR088W SAS4Q04003 481 aa8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms