RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C RME1P32338 300 aaKnown RBP6.57□□□□□ -1.36
PAT1YCR077C YME2P32843 850 aa6.57□□□□□ -1.36
PAT1YCR077C ATG23Q06671 453 aa6.57□□□□□ -1.36
PAT1YCR077C INP54Q08227 384 aaKnown RBP6.57□□□□□ -1.36
PAT1YCR077C FAR1P21268 830 aa6.57□□□□□ -1.36
PAT1YCR077C RRP43P25359 394 aaPredicted RBP6.57□□□□□ -1.36
PAT1YCR077C SLA1P32790 1244 aa6.57□□□□□ -1.36
PAT1YCR077C EFM2P38347 419 aa6.57□□□□□ -1.36
PAT1YCR077C NMD3P38861 518 aaKnown RBP6.57□□□□□ -1.36
PAT1YCR077C BUD16P39988 312 aa6.57□□□□□ -1.36
PAT1YCR077C AIM21P40563 679 aa6.57□□□□□ -1.36
PAT1YCR077C HOS2P53096 452 aaPredicted RBP6.57□□□□□ -1.36
PAT1YCR077C ENV9Q08651 330 aa6.57□□□□□ -1.36
PAT1YCR077C YOR223WQ12015 292 aa6.57□□□□□ -1.36
PAT1YCR077C BRR1Q99177 341 aaPredicted RBP6.57□□□□□ -1.36
PAT1YCR077C PEP3P27801 918 aa6.56□□□□□ -1.36
PAT1YCR077C ECM32P32644 1121 aaKnown RBP6.56□□□□□ -1.36
PAT1YCR077C RTS3P53289 263 aa6.56□□□□□ -1.36
PAT1YCR077C ADE12P80210 433 aaKnown RBP6.56□□□□□ -1.36
PAT1YCR077C SLX4Q12098 748 aa6.56□□□□□ -1.36
PAT1YCR077C OPI1P21957 404 aa6.55□□□□□ -1.36
PAT1YCR077C REX2P54964 269 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C MRD1Q06106 887 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C YAH1Q12184 172 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C TCB1Q12466 1186 aa6.55□□□□□ -1.36
PAT1YCR077C SSK22P25390 1331 aaPredicted RBP6.55□□□□□ -1.36
PAT1YCR077C PDR1P12383 1068 aa6.55□□□□□ -1.36
PAT1YCR077C OSH3P38713 996 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C YIR042CP40586 236 aa6.55□□□□□ -1.36
PAT1YCR077C TY4A-JP47023 414 aa6.55□□□□□ -1.36
PAT1YCR077C YNL247WP53852 767 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C BNI5P53890 448 aaKnown RBP6.55□□□□□ -1.36
PAT1YCR077C HEH2Q03281 663 aa6.55□□□□□ -1.36
PAT1YCR077C RSC2Q06488 889 aa6.55□□□□□ -1.36
PAT1YCR077C DAL7P21826 554 aa6.54□□□□□ -1.36
PAT1YCR077C PTH2P34222 208 aa6.54□□□□□ -1.36
PAT1YCR077C RPL17BP46990 184 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C YJR079WP47126 109 aa6.54□□□□□ -1.36
PAT1YCR077C ADE16P54113 591 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C VPS64Q03944 604 aa6.54□□□□□ -1.36
PAT1YCR077C KRE28Q04431 385 aa6.54□□□□□ -1.36
PAT1YCR077C AVO1Q08236 1176 aa6.54□□□□□ -1.36
PAT1YCR077C HXK1P04806 485 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C ADE17P38009 592 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C UBP14P38237 781 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C SHC1P39000 512 aa6.54□□□□□ -1.36
PAT1YCR077C MIC19P43594 170 aa6.54□□□□□ -1.36
PAT1YCR077C STE23Q06010 1027 aa6.54□□□□□ -1.36
PAT1YCR077C VAC14Q06708 880 aa6.54□□□□□ -1.36
PAT1YCR077C OSH2Q12451 1283 aa6.54□□□□□ -1.36
PAT1YCR077C FAS2P19097 1887 aaKnown RBP6.54□□□□□ -1.36
PAT1YCR077C YRF1-3P0CX14 1859 aa6.53□□□□□ -1.36
PAT1YCR077C YRF1-7P0CX15 1859 aa6.53□□□□□ -1.36
PAT1YCR077C YRF1-6P53819 1859 aa6.53□□□□□ -1.36
PAT1YCR077C CMP2P14747 604 aa6.53□□□□□ -1.36
PAT1YCR077C CBP3P21560 335 aa6.53□□□□□ -1.36
PAT1YCR077C GEF1P37020 779 aa6.53□□□□□ -1.36
PAT1YCR077C HXT5P38695 592 aa6.53□□□□□ -1.36
PAT1YCR077C SPT8P38915 602 aa6.53□□□□□ -1.36
PAT1YCR077C EPL1P43572 832 aa6.53□□□□□ -1.36
PAT1YCR077C NOP6Q07623 225 aaKnown RBP6.53□□□□□ -1.36
PAT1YCR077C ISW2Q08773 1120 aa6.53□□□□□ -1.36
PAT1YCR077C RUD3Q12234 484 aaKnown RBP6.53□□□□□ -1.36
PAT1YCR077C RMP1Q12530 201 aa6.53□□□□□ -1.36
PAT1YCR077C EFB1P32471 206 aaKnown RBP6.53□□□□□ -1.36
PAT1YCR077C MCX1P38323 520 aaPredicted RBP6.53□□□□□ -1.36
PAT1YCR077C EFM4P40516 257 aa6.53□□□□□ -1.36
PAT1YCR077C YJR142WP47173 342 aa6.53□□□□□ -1.36
PAT1YCR077C CUE3P53137 624 aaKnown RBP6.53□□□□□ -1.36
PAT1YCR077C FRK1Q03002 865 aaPredicted RBP6.53□□□□□ -1.36
PAT1YCR077C YPR097WQ06839 1073 aa6.53□□□□□ -1.36
PAT1YCR077C GYP5Q12344 894 aa6.53□□□□□ -1.36
PAT1YCR077C YOL098CQ12496 1037 aa6.53□□□□□ -1.36
PAT1YCR077C LAM4P38800 1345 aa6.52□□□□□ -1.36
PAT1YCR077C SAC3P46674 1301 aa6.52□□□□□ -1.36
PAT1YCR077C PRP16P15938 1071 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C DIT2P21595 489 aa6.52□□□□□ -1.37
PAT1YCR077C NFU1P32860 256 aa6.52□□□□□ -1.37
PAT1YCR077C SEC66P33754 206 aa6.52□□□□□ -1.37
PAT1YCR077C SHM1P37292 490 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C PTC4P38089 393 aa6.52□□□□□ -1.37
PAT1YCR077C PKH3Q03306 898 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C GFD1Q04839 188 aaKnown RBP6.52□□□□□ -1.37
PAT1YCR077C HMI1Q12039 706 aa6.52□□□□□ -1.37
PAT1YCR077C DCS2Q12123 353 aa6.52□□□□□ -1.37
PAT1YCR077C AI2P03876 854 aa6.52□□□□□ -1.37
PAT1YCR077C CDC37P06101 506 aaKnown RBP6.52□□□□□ -1.37
PAT1YCR077C ARD1P07347 238 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C RGP1P16664 663 aa6.52□□□□□ -1.37
PAT1YCR077C CDC48P25694 835 aaKnown RBP6.52□□□□□ -1.37
PAT1YCR077C URA1P28272 314 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C SEC65P29478 273 aa6.52□□□□□ -1.37
PAT1YCR077C IMP2'P32351 346 aa6.52□□□□□ -1.37
PAT1YCR077C APL2P36000 726 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C YSW1P38280 609 aa6.52□□□□□ -1.37
PAT1YCR077C OCA1P50946 238 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C DSL1P53847 754 aa6.52□□□□□ -1.37
PAT1YCR077C FAR11P53917 953 aa6.52□□□□□ -1.37
PAT1YCR077C YMR111CQ04461 462 aaPredicted RBP6.52□□□□□ -1.37
PAT1YCR077C HCR1Q05775 265 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms