RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Ccdc146E9Q9F7 977 aa13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Ppp1r15aP17564 657 aa13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Eif4g2Q62448 906 aaKnown RBP13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Arap3Q8R5G7 1538 aa13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Dhx16G3X8X0 1044 aaKnown RBP13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 MarsQ68FL6 902 aaKnown RBP13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Ppip5k2Q6ZQB6 1129 aa13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Rreb1Q3UH06 1700 aaKnown RBP13.94□□□□□ -0.18
Lig1-211ENSMUST00000177588 Rims2Q9EQZ7 1530 aa13.94□□□□□ -0.18
Lig1-211ENSMUST00000177588 Clcn1Q64347 994 aa13.94□□□□□ -0.18
Lig1-211ENSMUST00000177588 Ppp6r3Q922D4 844 aa13.94□□□□□ -0.18
Lig1-211ENSMUST00000177588 Ap3b2Q9JME5 1082 aa13.94□□□□□ -0.18
Lig1-211ENSMUST00000177588 HnrnpuQ8VEK3 800 aaKnown RBP13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 Usp16Q99LG0 825 aa13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 Gcc1Q9D4H2 778 aa13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 FanclQ9CR14 375 aa13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 Rasa1E9PYG6 1038 aa13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 Zkscan1Q8BGS3 561 aaKnown RBP13.93□□□□□ -0.18
Lig1-211ENSMUST00000177588 Uhrf1bp1lA2RSJ4 1457 aa13.92□□□□□ -0.18
Lig1-211ENSMUST00000177588 Vsig10D3YX43 558 aa13.92□□□□□ -0.18
Lig1-211ENSMUST00000177588 Tnrc6bQ8BKI2 1810 aaKnown RBP13.92□□□□□ -0.18
Lig1-211ENSMUST00000177588 NalcnQ8BXR5 1738 aa13.92□□□□□ -0.18
Lig1-211ENSMUST00000177588 Ric3Q8BPM6 367 aa13.92□□□□□ -0.18
Lig1-211ENSMUST00000177588 Nucb1Q02819 459 aaKnown RBP13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Sos1Q62245 1319 aa13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Mcm2P97310 904 aa13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Stk11ipQ3TAA7 1072 aa13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Aldh1l2Q8K009 923 aa13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 ImpactO55091 318 aa13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Pdia3P27773 505 aaKnown RBP13.91□□□□□ -0.18
Lig1-211ENSMUST00000177588 Kif24Q6NWW5 1356 aa13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Tpm2P58774 284 aa13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Cabp2Q9JLK4 216 aa13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 N4bp2F8VQG7 1678 aaKnown RBP13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Rab11fip3Q8CHD8 1047 aa13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Lmtk3Q5XJV6 1424 aa13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Kif20bQ80WE4 1774 aaKnown RBP13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 ScaperF8VQ70 1398 aaKnown RBP13.9□□□□□ -0.18
Lig1-211ENSMUST00000177588 Tm6sf1P58749 370 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 U2surpQ6NV83 1029 aaKnown RBP13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Elp1Q7TT37 1333 aaKnown RBP13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Triml2E9PW10 424 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Mcm10Q0VBD2 885 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Fam13aQ8BGI4 693 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Klhdc4Q921I2 584 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Cyp27a1Q9DBG1 533 aa13.89□□□□□ -0.19
Lig1-211ENSMUST00000177588 Rsph6aQ8CDR2 708 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Tex2Q6ZPJ0 1128 aaKnown RBP13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Erich6bQ9D4S6 220 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Tns3Q5SSZ5 1440 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Zdhhc9P59268 364 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Pip4k2bQ80XI4 416 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 4931400O07RikQ9D4M5 137 aa13.87□□□□□ -0.19
Lig1-211ENSMUST00000177588 Gm9992B2RWK3 458 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 PtmaP26350 111 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Aifm3Q3TY86 605 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Taok2Q6ZQ29 1240 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Unc93aQ710D3 458 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Pdcl2Q78Y63 240 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Smarca5Q91ZW3 1051 aaKnown RBP13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Znf335A2A5K6 1337 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Rimbp3Q3V0F0 1606 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Med1Q925J9 1575 aa13.86□□□□□ -0.19
Lig1-211ENSMUST00000177588 Gm21190A0A0G2JGJ6 266 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Plin1Q8CGN5 517 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Cabp4Q8VHC5 271 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Abcc10Q8R4P9 1501 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Astn2Q80Z10 1352 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Scn7aB1AYL1 1681 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Hoxb7P09024 217 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Fez1Q8K0X8 392 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Erbb4Q61527 1308 aa13.85□□□□□ -0.19
Lig1-211ENSMUST00000177588 Evi5lH3BKQ3 813 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 Dennd6aQ8BH65 605 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 Chl1P70232 1209 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 VgfQ0VGU4 617 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 Phf23Q8BSN5 401 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 D430041D05RikF6ZGR6 1678 aa13.84□□□□□ -0.19
Lig1-211ENSMUST00000177588 PtmsQ9D0J8 101 aaKnown RBP13.83□□□□□ -0.19
Lig1-211ENSMUST00000177588 Ripk4Q9ERK0 786 aa13.83□□□□□ -0.19
Lig1-211ENSMUST00000177588 Mon2Q80TL7 1715 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Chd4Q6PDQ2 1915 aaKnown RBP13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Atg4a-psA0A0G2JFS9 396 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Mrps27Q8BK72 415 aaKnown RBP13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Atg4aQ8C9S8 396 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Frmpd2A0A140LI67 1392 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Slc35g1Q8BY79 368 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Slain2Q8CI08 581 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Ush1cQ9ES64 910 aa13.83□□□□□ -0.2
Lig1-211ENSMUST00000177588 Prkar2bP31324 416 aa13.82□□□□□ -0.2
Lig1-211ENSMUST00000177588 Gdpd2Q9ESM6 539 aa13.82□□□□□ -0.2
Lig1-211ENSMUST00000177588 Cdk12Q14AX6 1484 aaKnown RBP13.82□□□□□ -0.2
Lig1-211ENSMUST00000177588 Rnf123Q5XPI3 1314 aa13.82□□□□□ -0.2
Lig1-211ENSMUST00000177588 Cyp46a1Q9WVK8 500 aa13.82□□□□□ -0.2
Lig1-211ENSMUST00000177588 Zkscan16A2ALW2 728 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Pdia4P08003 638 aaKnown RBP13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Erc2Q6PH08 957 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Q9D2X8 372 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 C5P06684 1680 aa13.81□□□□□ -0.2
Lig1-211ENSMUST00000177588 Tet3Q8BG87 1668 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms