RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Arfgef2A2A5R2 1792 aa13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 Ltbp4Q8K4G1 1666 aa13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 Atl3Q91YH5 541 aa13.71□□□□□ -0.21
Lig3-210ENSMUST00000173347 Ric3Q8BPM6 367 aa13.71□□□□□ -0.21
Lig3-210ENSMUST00000173347 Gm21698A0A087WQP8 267 aa13.71□□□□□ -0.22
Lig3-210ENSMUST00000173347 Gm21671G3UY31 267 aa13.71□□□□□ -0.22
Lig3-210ENSMUST00000173347 MarsQ68FL6 902 aaKnown RBP13.71□□□□□ -0.22
Lig3-210ENSMUST00000173347 Ddx17Q501J6 650 aaKnown RBP13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Cluap1Q8R3P7 413 aa13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Q3TQI7 289 aaKnown RBP13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Ankrd44B2RXR6 993 aa13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Hs1bp3Q3TC93 395 aa13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 TkfcQ8VC30 578 aa13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Ahnak2E9PYB0 1738 aaKnown RBP13.7□□□□□ -0.22
Lig3-210ENSMUST00000173347 Igsf1Q7TQA1 1317 aa13.69□□□□□ -0.22
Lig3-210ENSMUST00000173347 Chl1P70232 1209 aa13.69□□□□□ -0.22
Lig3-210ENSMUST00000173347 Rtl5Q5DTT4 599 aa13.69□□□□□ -0.22
Lig3-210ENSMUST00000173347 Amigo3Q8C2S7 508 aa13.68□□□□□ -0.22
Lig3-210ENSMUST00000173347 Gm10471E9Q1C7 252 aa13.68□□□□□ -0.22
Lig3-210ENSMUST00000173347 Egfem1Q8C088 590 aa13.67□□□□□ -0.22
Lig3-210ENSMUST00000173347 Foxp4Q9DBY0 795 aaKnown RBP13.67□□□□□ -0.22
Lig3-210ENSMUST00000173347 DccP70211 1447 aa13.67□□□□□ -0.22
Lig3-210ENSMUST00000173347 Adgrb1Q3UHD1 1582 aa13.67□□□□□ -0.22
Lig3-210ENSMUST00000173347 Tet3Q8BG87 1668 aa13.67□□□□□ -0.22
Lig3-210ENSMUST00000173347 Card10P58660 1021 aa13.66□□□□□ -0.22
Lig3-210ENSMUST00000173347 Sv2bQ8BG39 683 aa13.66□□□□□ -0.22
Lig3-210ENSMUST00000173347 Ppp1r37Q8BKR5 712 aa13.66□□□□□ -0.22
Lig3-210ENSMUST00000173347 Trim30dE9PWL0 497 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Simc1E9Q6E9 1354 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Kif24Q6NWW5 1356 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Nid2O88322 1403 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Brinp3Q499E0 766 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 OptnQ8K3K8 584 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Abcc12Q80WJ6 1366 aa13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 Nup153E9Q3G8 1462 aaKnown RBP13.65□□□□□ -0.22
Lig3-210ENSMUST00000173347 HdgfP51859 237 aaKnown RBP13.64□□□□□ -0.23
Lig3-210ENSMUST00000173347 CrklP47941 303 aa13.64□□□□□ -0.23
Lig3-210ENSMUST00000173347 Ppp2r3aB2RXC8 1150 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 AU019823E9PUQ3 292 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 4930567H17RikQ3V0K5 233 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 Fgd1P52734 960 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 Aifm3Q3TY86 605 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 Aldh1l2Q8K009 923 aa13.63□□□□□ -0.23
Lig3-210ENSMUST00000173347 Col15a1O35206 1367 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Atf5O70191 283 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 SkilQ60665 675 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 HnrnpuQ8VEK3 800 aaKnown RBP13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Gli3Q61602 1583 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Chpf2Q3UU43 768 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Cadps2Q8BYR5 1297 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Ipo9Q91YE6 1041 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Msh6P54276 1358 aaKnown RBP13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Tnnt1O88346 262 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Zranb3Q6NZP1 1069 aa13.62□□□□□ -0.23
Lig3-210ENSMUST00000173347 Map7O88735 730 aa13.61□□□□□ -0.23
Lig3-210ENSMUST00000173347 Aplp1Q03157 653 aa13.61□□□□□ -0.23
Lig3-210ENSMUST00000173347 Wwc1Q5SXA9 1104 aa13.61□□□□□ -0.23
Lig3-210ENSMUST00000173347 Irx6Q9ER75 438 aa13.61□□□□□ -0.23
Lig3-210ENSMUST00000173347 Aox2Q5SGK3 1345 aa13.61□□□□□ -0.23
Lig3-210ENSMUST00000173347 ZgpatQ8VDM1 511 aa13.6□□□□□ -0.23
Lig3-210ENSMUST00000173347 Btbd11Q6GQW0 1109 aa13.6□□□□□ -0.23
Lig3-210ENSMUST00000173347 ThemisQ8BGW0 636 aa13.6□□□□□ -0.23
Lig3-210ENSMUST00000173347 Fam83gQ5SWY7 812 aa13.59□□□□□ -0.23
Lig3-210ENSMUST00000173347 Bcl9lQ67FY2 1494 aa13.59□□□□□ -0.23
Lig3-210ENSMUST00000173347 Ccdc183A2AJB1 534 aa13.59□□□□□ -0.23
Lig3-210ENSMUST00000173347 PrkcshO08795 521 aa13.59□□□□□ -0.23
Lig3-210ENSMUST00000173347 Atp10bB1AWN4 1474 aa13.59□□□□□ -0.23
Lig3-210ENSMUST00000173347 Myo5bP21271 1818 aa13.58□□□□□ -0.23
Lig3-210ENSMUST00000173347 Ipo8Q7TMY7 1010 aa13.58□□□□□ -0.23
Lig3-210ENSMUST00000173347 Chmp7Q8R1T1 451 aa13.58□□□□□ -0.23
Lig3-210ENSMUST00000173347 Cyb5rlB1AS42 316 aa13.58□□□□□ -0.24
Lig3-210ENSMUST00000173347 Triml2E9PW10 424 aa13.58□□□□□ -0.24
Lig3-210ENSMUST00000173347 Eif4a1P60843 406 aaKnown RBP13.58□□□□□ -0.24
Lig3-210ENSMUST00000173347 Plekhd1B2RPU2 505 aa13.57□□□□□ -0.24
Lig3-210ENSMUST00000173347 Cyp2d12Q8BVD2 504 aa13.57□□□□□ -0.24
Lig3-210ENSMUST00000173347 Ak7Q9D2H2 614 aa13.57□□□□□ -0.24
Lig3-210ENSMUST00000173347 Phlpp2Q8BXA7 1320 aa13.57□□□□□ -0.24
Lig3-210ENSMUST00000173347 4930572O03RikQ8C5Y0 211 aa13.56□□□□□ -0.24
Lig3-210ENSMUST00000173347 Cetn4Q8K4K1 168 aa13.56□□□□□ -0.24
Lig3-210ENSMUST00000173347 Cnksr1A2A9K7 700 aa13.56□□□□□ -0.24
Lig3-210ENSMUST00000173347 Pdzd9Q9D9M4 266 aa13.56□□□□□ -0.24
Lig3-210ENSMUST00000173347 Abca15E9PWH4 1668 aa13.56□□□□□ -0.24
Lig3-210ENSMUST00000173347 Col1a2Q01149 1372 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 Prkar2bP31324 416 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 PsapQ61207 557 aaKnown RBP13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 Trim27Q62158 513 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 KnstrnQ9D9Z1 312 aaKnown RBP13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 RgmbQ7TQ33 436 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 Phkg2Q9DB30 406 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 Txnrd1Q9JMH6 613 aa13.55□□□□□ -0.24
Lig3-210ENSMUST00000173347 Tm6sf1P58749 370 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Fam50bQ9WTJ8 334 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Slit1Q80TR4 1531 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 LifrP42703 1092 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Zpr1Q62384 459 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Cgnl1Q6AW69 1298 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Kif18aQ91WD7 886 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Brd1E9PZ26 1189 aaKnown RBP13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Eif4g2Q62448 906 aaKnown RBP13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Phf23Q8BSN5 401 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms