Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Gm25239-201ENSMUST00000174915 86 ntBASIC52.12■■■■■ 5.93
Slit1Q80TR4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC48.39■■■■■ 5.34
Slit1Q80TR4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC47.52■■■■■ 5.2
Slit1Q80TR4 Gm24109-201ENSMUST00000175489 103 ntBASIC45.43■■■■■ 4.86
Slit1Q80TR4 Gm15042-201ENSMUST00000120212 883 ntBASIC45.24■■■■■ 4.83
Slit1Q80TR4 Gm15045-201ENSMUST00000117359 883 ntBASIC44.3■■■■■ 4.68
Slit1Q80TR4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC44.05■■■■■ 4.64
Slit1Q80TR4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC43.91■■■■■ 4.62
Slit1Q80TR4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC43.7■■■■■ 4.59
Slit1Q80TR4 Gm23366-201ENSMUST00000175022 89 ntBASIC43.44■■■■■ 4.54
Slit1Q80TR4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.38■■■■■ 4.53
Slit1Q80TR4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.75■■■■■ 4.43
Slit1Q80TR4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC42.36■■■■■ 4.37
Slit1Q80TR4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.22■■■■■ 4.35
Slit1Q80TR4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42.19■■■■■ 4.34
Slit1Q80TR4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC42.04■■■■■ 4.32
Slit1Q80TR4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC41.91■■■■■ 4.3
Slit1Q80TR4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC41.86■■■■■ 4.29
Slit1Q80TR4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC41.73■■■■■ 4.27
Slit1Q80TR4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
Slit1Q80TR4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
Slit1Q80TR4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.41■■■■■ 4.22
Slit1Q80TR4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41.34■■■■■ 4.21
Slit1Q80TR4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
Slit1Q80TR4 Gm25238-201ENSMUST00000174914 89 ntBASIC41.25■■■■■ 4.19
Slit1Q80TR4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC41.2■■■■■ 4.19
Slit1Q80TR4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41■■■■■ 4.15
Slit1Q80TR4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
Slit1Q80TR4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Slit1Q80TR4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Slit1Q80TR4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC40.57■■■■■ 4.08
Slit1Q80TR4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC40.56■■■■■ 4.08
Slit1Q80TR4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC40.48■■■■■ 4.07
Slit1Q80TR4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.37■■■■■ 4.05
Slit1Q80TR4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
Slit1Q80TR4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC40.04■■■■■ 4
Slit1Q80TR4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC40.01■■■■□ 3.99
Slit1Q80TR4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Slit1Q80TR4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC39.91■■■■□ 3.98
Slit1Q80TR4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Slit1Q80TR4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.7■■■■□ 3.95
Slit1Q80TR4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
Slit1Q80TR4 Gm27325-201ENSMUST00000175467 74 ntBASIC39.59■■■■□ 3.93
Slit1Q80TR4 Gm25262-201ENSMUST00000174934 133 ntBASIC39.57■■■■□ 3.93
Slit1Q80TR4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39.48■■■■□ 3.91
Slit1Q80TR4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.37■■■■□ 3.89
Slit1Q80TR4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Slit1Q80TR4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Slit1Q80TR4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC39.11■■■■□ 3.85
Slit1Q80TR4 Psd-208ENSMUST00000224556 2034 ntBASIC39.1■■■■□ 3.85
Slit1Q80TR4 Rab21-202ENSMUST00000218831 843 ntBASIC39.08■■■■□ 3.85
Slit1Q80TR4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC38.96■■■■□ 3.83
Slit1Q80TR4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC38.94■■■■□ 3.82
Slit1Q80TR4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.93■■■■□ 3.82
Slit1Q80TR4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
Slit1Q80TR4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
Slit1Q80TR4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
Slit1Q80TR4 Gm26115-201ENSMUST00000175605 87 ntBASIC38.73■■■■□ 3.79
Slit1Q80TR4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC38.72■■■■□ 3.79
Slit1Q80TR4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Slit1Q80TR4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC38.66■■■■□ 3.78
Slit1Q80TR4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC38.65■■■■□ 3.78
Slit1Q80TR4 Gm8109-201ENSMUST00000194076 746 ntBASIC38.55■■■■□ 3.76
Slit1Q80TR4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38.54■■■■□ 3.76
Slit1Q80TR4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
Slit1Q80TR4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
Slit1Q80TR4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.43■■■■□ 3.74
Slit1Q80TR4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.38■■■■□ 3.73
Slit1Q80TR4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
Slit1Q80TR4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.32■■■■□ 3.73
Slit1Q80TR4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Slit1Q80TR4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Slit1Q80TR4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
Slit1Q80TR4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC38.21■■■■□ 3.71
Slit1Q80TR4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.2■■■■□ 3.71
Slit1Q80TR4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.16■■■■□ 3.7
Slit1Q80TR4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
Slit1Q80TR4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Slit1Q80TR4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.68
Slit1Q80TR4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC37.95■■■■□ 3.67
Slit1Q80TR4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Slit1Q80TR4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC37.85■■■■□ 3.65
Slit1Q80TR4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
Slit1Q80TR4 Gm17082-201ENSMUST00000166043 1091 ntBASIC37.83■■■■□ 3.65
Slit1Q80TR4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Slit1Q80TR4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
Slit1Q80TR4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Slit1Q80TR4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Slit1Q80TR4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC37.71■■■■□ 3.63
Slit1Q80TR4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC37.64■■■■□ 3.62
Slit1Q80TR4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37.59■■■■□ 3.61
Slit1Q80TR4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.56■■■■□ 3.6
Slit1Q80TR4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.52■■■■□ 3.6
Slit1Q80TR4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37.48■■■■□ 3.59
Slit1Q80TR4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Slit1Q80TR4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Slit1Q80TR4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Slit1Q80TR4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.37■■■■□ 3.57
Slit1Q80TR4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
Slit1Q80TR4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC37.33■■■■□ 3.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms