RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 NischQ80TM9 1593 aa22.04■■□□□ 1.12
Lig3-210ENSMUST00000173347 Gm35339A0A140LHH9 1649 aa21.84■■□□□ 1.09
Lig3-210ENSMUST00000173347 Abcc9P70170 1546 aa21.38■■□□□ 1.01
Lig3-210ENSMUST00000173347 Abcc8B2RUS7 1588 aa21.02■□□□□ 0.96
Lig3-210ENSMUST00000173347 Rhox8Q6VSS7 320 aa20.05■□□□□ 0.8
Lig3-210ENSMUST00000173347 ScribQ80U72 1612 aa19.76■□□□□ 0.75
Lig3-210ENSMUST00000173347 Dcaf1Q80TR8 1506 aa19.59■□□□□ 0.73
Lig3-210ENSMUST00000173347 Rtl1Q7M732 1744 aa19.44■□□□□ 0.7
Lig3-210ENSMUST00000173347 Kdm5dQ62240 1548 aa19.34■□□□□ 0.69
Lig3-210ENSMUST00000173347 NacadQ5SWP3 1504 aa19.29■□□□□ 0.68
Lig3-210ENSMUST00000173347 Rb1cc1Q9ESK9 1588 aa19.28■□□□□ 0.68
Lig3-210ENSMUST00000173347 Ccdc180J3QNE4 1664 aa19.09■□□□□ 0.65
Lig3-210ENSMUST00000173347 Baz1aO88379 1555 aa19.06■□□□□ 0.64
Lig3-210ENSMUST00000173347 Sycp2Q9CUU3 1500 aa18.85■□□□□ 0.61
Lig3-210ENSMUST00000173347 Crybg2B7ZCC2 1516 aa18.81■□□□□ 0.6
Lig3-210ENSMUST00000173347 Zcchc6Q5BLK4 1491 aaKnown RBP18.76■□□□□ 0.59
Lig3-210ENSMUST00000173347 Ccdc136Q3TVA9 1136 aa18.59■□□□□ 0.57
Lig3-210ENSMUST00000173347 Smarca2Q6DIC0 1577 aa18.57■□□□□ 0.56
Lig3-210ENSMUST00000173347 BicraF8VPZ9 1578 aa18.43■□□□□ 0.54
Lig3-210ENSMUST00000173347 Trim41Q5NCC3 630 aa18.32■□□□□ 0.52
Lig3-210ENSMUST00000173347 Cecr2E9Q2Z1 1453 aa18.19■□□□□ 0.5
Lig3-210ENSMUST00000173347 Brd4Q9ESU6 1400 aaKnown RBP18.17■□□□□ 0.5
Lig3-210ENSMUST00000173347 HrcG5E8J6 738 aa18.14■□□□□ 0.49
Lig3-210ENSMUST00000173347 Synj1Q8CHC4 1574 aa17.98■□□□□ 0.47
Lig3-210ENSMUST00000173347 Smarca4Q3TKT4 1613 aaKnown RBP17.97■□□□□ 0.47
Lig3-210ENSMUST00000173347 CftrP26361 1476 aa17.94■□□□□ 0.46
Lig3-210ENSMUST00000173347 Cttnbp2B9EJA2 1648 aa17.89■□□□□ 0.45
Lig3-210ENSMUST00000173347 Cngb1E1AZ71 1325 aa17.86■□□□□ 0.45
Lig3-210ENSMUST00000173347 Esf1Q3V1V3 845 aaKnown RBP17.83■□□□□ 0.45
Lig3-210ENSMUST00000173347 Golga3P55937 1487 aa17.82■□□□□ 0.44
Lig3-210ENSMUST00000173347 Pds5bQ4VA53 1446 aaKnown RBP17.8■□□□□ 0.44
Lig3-210ENSMUST00000173347 Atad2bE9Q166 1460 aaKnown RBP17.8■□□□□ 0.44
Lig3-210ENSMUST00000173347 Iqgap2Q3UQ44 1575 aa17.76■□□□□ 0.43
Lig3-210ENSMUST00000173347 Cep164Q5DU05 1446 aa17.73■□□□□ 0.43
Lig3-210ENSMUST00000173347 Top2bQ64511 1612 aa17.63■□□□□ 0.41
Lig3-210ENSMUST00000173347 Rsf1E9PWW9 1441 aaKnown RBP17.62■□□□□ 0.41
Lig3-210ENSMUST00000173347 Chic1Q8CBW7 227 aa17.58■□□□□ 0.4
Lig3-210ENSMUST00000173347 Ccdc88bQ4QRL3 1481 aa17.56■□□□□ 0.4
Lig3-210ENSMUST00000173347 Ercc6F8VPZ5 1481 aa17.48■□□□□ 0.39
Lig3-210ENSMUST00000173347 Wdr62Q3U3T8 1523 aa17.46■□□□□ 0.39
Lig3-210ENSMUST00000173347 Cc2d2aQ8CFW7 1633 aa17.46■□□□□ 0.38
Lig3-210ENSMUST00000173347 Frmpd1A2AKB4 1549 aa17.45■□□□□ 0.38
Lig3-210ENSMUST00000173347 Fmn1Q05860 1466 aa17.44■□□□□ 0.38
Lig3-210ENSMUST00000173347 Gab3Q8BSM5 595 aa17.4■□□□□ 0.38
Lig3-210ENSMUST00000173347 Thoc2B1AZI6 1594 aaKnown RBP17.27■□□□□ 0.36
Lig3-210ENSMUST00000173347 Top2aQ01320 1528 aaKnown RBP17.26■□□□□ 0.35
Lig3-210ENSMUST00000173347 TnnQ80Z71 1560 aa17.23■□□□□ 0.35
Lig3-210ENSMUST00000173347 Ehmt2Q9Z148 1263 aaKnown RBP17.21■□□□□ 0.35
Lig3-210ENSMUST00000173347 Unc13aQ4KUS2 1712 aa17.2■□□□□ 0.34
Lig3-210ENSMUST00000173347 Lamc3Q9R0B6 1581 aa17.19■□□□□ 0.34
Lig3-210ENSMUST00000173347 Phldb1Q6PDH0 1371 aaKnown RBP17.19■□□□□ 0.34
Lig3-210ENSMUST00000173347 Kif15Q6P9L6 1387 aa17.18■□□□□ 0.34
Lig3-210ENSMUST00000173347 Rapgef2Q8CHG7 1496 aa17.1■□□□□ 0.33
Lig3-210ENSMUST00000173347 Rpgrip1Q9EPQ2 1331 aa17.09■□□□□ 0.33
Lig3-210ENSMUST00000173347 Fam135aQ6NS59 1506 aa17.07■□□□□ 0.32
Lig3-210ENSMUST00000173347 Ubl4bQ9CQ84 188 aa17.05■□□□□ 0.32
Lig3-210ENSMUST00000173347 Npm2Q80W85 207 aa17.03■□□□□ 0.32
Lig3-210ENSMUST00000173347 Il27Q8K3I6 234 aa17.03■□□□□ 0.32
Lig3-210ENSMUST00000173347 Ccdc18Q640L5 1455 aa17.02■□□□□ 0.32
Lig3-210ENSMUST00000173347 Acin1Q9JIX8 1338 aaKnown RBP17.01■□□□□ 0.31
Lig3-210ENSMUST00000173347 Camsap1A2AHC3 1581 aa17■□□□□ 0.31
Lig3-210ENSMUST00000173347 Cep162Q6ZQ06 1403 aa16.98■□□□□ 0.31
Lig3-210ENSMUST00000173347 Cux2P70298 1426 aa16.96■□□□□ 0.31
Lig3-210ENSMUST00000173347 Myt1lP97500 1187 aa16.91■□□□□ 0.3
Lig3-210ENSMUST00000173347 Npm1Q61937 292 aaKnown RBP16.9■□□□□ 0.3
Lig3-210ENSMUST00000173347 NrkQ9R0G8 1455 aa16.89■□□□□ 0.29
Lig3-210ENSMUST00000173347 Grin2bQ01097 1482 aa16.86■□□□□ 0.29
Lig3-210ENSMUST00000173347 Baz1bQ9Z277 1479 aa16.86■□□□□ 0.29
Lig3-210ENSMUST00000173347 Shroom4Q1W617 1475 aa16.86■□□□□ 0.29
Lig3-210ENSMUST00000173347 PtprkP35822 1457 aa16.85■□□□□ 0.29
Lig3-210ENSMUST00000173347 Eif4g1Q6NZJ6 1600 aaKnown RBP16.84■□□□□ 0.29
Lig3-210ENSMUST00000173347 Arhgap35Q91YM2 1499 aa16.79■□□□□ 0.28
Lig3-210ENSMUST00000173347 LrpprcQ6PB66 1392 aaKnown RBP16.78■□□□□ 0.28
Lig3-210ENSMUST00000173347 Dnajc5bQ9CQ94 199 aa16.76■□□□□ 0.27
Lig3-210ENSMUST00000173347 Zeb1Q64318 1117 aa16.76■□□□□ 0.27
Lig3-210ENSMUST00000173347 Mrc2Q64449 1479 aa16.73■□□□□ 0.27
Lig3-210ENSMUST00000173347 Map3k1P53349 1493 aa16.73■□□□□ 0.27
Lig3-210ENSMUST00000173347 PogzQ8BZH4 1409 aaKnown RBP16.72■□□□□ 0.27
Lig3-210ENSMUST00000173347 Efcab5A0JP43 1406 aa16.72■□□□□ 0.27
Lig3-210ENSMUST00000173347 Duox2A2AQ99 1517 aa16.68■□□□□ 0.26
Lig3-210ENSMUST00000173347 Clip1Q922J3 1391 aa16.68■□□□□ 0.26
Lig3-210ENSMUST00000173347 Mroh2bQ7M6Y6 1581 aa16.67■□□□□ 0.26
Lig3-210ENSMUST00000173347 Dhx29Q6PGC1 1365 aaKnown RBP16.67■□□□□ 0.26
Lig3-210ENSMUST00000173347 Eea1Q8BL66 1411 aa16.61■□□□□ 0.25
Lig3-210ENSMUST00000173347 Kif21aQ9QXL2 1672 aa16.59■□□□□ 0.25
Lig3-210ENSMUST00000173347 AqrQ8CFQ3 1481 aaKnown RBP16.59■□□□□ 0.25
Lig3-210ENSMUST00000173347 Crocc2F6XLV1 1638 aa16.57■□□□□ 0.24
Lig3-210ENSMUST00000173347 Setd5Q5XJV7 1441 aa16.56■□□□□ 0.24
Lig3-210ENSMUST00000173347 UbtfP25976 765 aaKnown RBP16.55■□□□□ 0.24
Lig3-210ENSMUST00000173347 Carmil1Q6EDY6 1374 aa16.55■□□□□ 0.24
Lig3-210ENSMUST00000173347 Samd9lQ69Z37 1561 aa16.54■□□□□ 0.24
Lig3-210ENSMUST00000173347 SynmQ70IV5 1561 aa16.51■□□□□ 0.23
Lig3-210ENSMUST00000173347 Mier1Q5UAK0 511 aa16.5■□□□□ 0.23
Lig3-210ENSMUST00000173347 Arap1Q4LDD4 1452 aa16.5■□□□□ 0.23
Lig3-210ENSMUST00000173347 Plekhg3Q4VAC9 1341 aa16.49■□□□□ 0.23
Lig3-210ENSMUST00000173347 Ap3b1Q9Z1T1 1105 aa16.46■□□□□ 0.23
Lig3-210ENSMUST00000173347 Rad54l2Q99NG0 1466 aa16.45■□□□□ 0.22
Lig3-210ENSMUST00000173347 Arhgef5E9Q7D5 1581 aa16.45■□□□□ 0.22
Lig3-210ENSMUST00000173347 Ankrd26Q811D2 1581 aa16.45■□□□□ 0.22
Lig3-210ENSMUST00000173347 Erich3F6QRE9 1637 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms